RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 HIGD2BQ4VC39 106 aa5.42□□□□□ -1.54
SMAD1-209ENST00000511125 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
SMAD1-209ENST00000511125 ZNF25P17030 456 aaPredicted RBP5.42□□□□□ -1.54
SMAD1-209ENST00000511125 LGALS9CQ6DKI2 356 aa5.42□□□□□ -1.54
SMAD1-209ENST00000511125 VAMP8Q9BV40 100 aa5.42□□□□□ -1.54
SMAD1-209ENST00000511125 ZNF22P17026 224 aaPredicted RBP5.42□□□□□ -1.54
SMAD1-209ENST00000511125 MALP21145 153 aa5.42□□□□□ -1.54
SMAD1-209ENST00000511125 SPATA45Q537H7 98 aa5.42□□□□□ -1.54
SMAD1-209ENST00000511125 LINC01556Q5JQF7 62 aa5.41□□□□□ -1.54
SMAD1-209ENST00000511125 C1orf43Q9BWL3 253 aa5.41□□□□□ -1.54
SMAD1-209ENST00000511125 DYNC2H1Q8NCM8 4307 aaKnown RBP5.41□□□□□ -1.54
SMAD1-209ENST00000511125 H7C423 109 aa5.41□□□□□ -1.54
SMAD1-209ENST00000511125 PSCAO43653 123 aa5.41□□□□□ -1.54
SMAD1-209ENST00000511125 MRPS36P82909 103 aaKnown RBP5.41□□□□□ -1.54
SMAD1-209ENST00000511125 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
SMAD1-209ENST00000511125 TIMM21Q9BVV7 248 aa5.41□□□□□ -1.54
SMAD1-209ENST00000511125 HSBP1L1C9JCN9 74 aa5.4□□□□□ -1.54
SMAD1-209ENST00000511125 DNAH10OSP0CZ25 163 aa5.4□□□□□ -1.54
SMAD1-209ENST00000511125 SMAGPQ0VAQ4 97 aa5.4□□□□□ -1.54
SMAD1-209ENST00000511125 CSDC2Q9Y534 153 aaKnown RBP5.4□□□□□ -1.54
SMAD1-209ENST00000511125 TRAV12-1A0A0B4J245 112 aa5.4□□□□□ -1.55
SMAD1-209ENST00000511125 S100A12P80511 92 aa5.4□□□□□ -1.55
SMAD1-209ENST00000511125 C6orf223Q8N319 242 aa5.4□□□□□ -1.55
SMAD1-209ENST00000511125 C2orf82Q6UX34 121 aa5.4□□□□□ -1.55
SMAD1-209ENST00000511125 MAPKAPK5-AS1Q8N8E1 139 aa5.4□□□□□ -1.55
SMAD1-209ENST00000511125 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.39□□□□□ -1.55
SMAD1-209ENST00000511125 TRAV9-2A0A087WT02 112 aa5.39□□□□□ -1.55
SMAD1-209ENST00000511125 NBDYA0A0U1RRE5 68 aa5.39□□□□□ -1.55
SMAD1-209ENST00000511125 PLNP26678 52 aa5.39□□□□□ -1.55
SMAD1-209ENST00000511125 TIRAPP58753 221 aa5.39□□□□□ -1.55
SMAD1-209ENST00000511125 TSPEAR-AS2P59090 65 aa5.39□□□□□ -1.55
SMAD1-209ENST00000511125 LINC00518Q8N0U6 118 aa5.39□□□□□ -1.55
SMAD1-209ENST00000511125 LINC00476Q8WZB0 136 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 VPS13DQ5THJ4 4388 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 KMT2CQ8NEZ4 4911 aaKnown RBP5.38□□□□□ -1.55
SMAD1-209ENST00000511125 TINCRA0A1B0GVN0 87 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 C3orf84H3BNL1 204 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 IGLC3P0DOY3 106 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 NPC2P61916 151 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 HERVK_113P63121 156 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 WFDC2Q14508 124 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 LINC01620Q4KN68 170 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 IGHV3OR16-9A0A0B4J2B5 98 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 LINC01549A6NIU2 74 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 COX7A2LO14548 114 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 ORAOV1Q8WV07 137 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 PRR34Q9NV39 138 aa5.38□□□□□ -1.55
SMAD1-209ENST00000511125 IBA57-AS1B1ANH7 110 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 FOXI1Q12951 378 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 MIAQ16674 131 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 C9orf116Q5BN46 136 aaPredicted RBP5.37□□□□□ -1.55
SMAD1-209ENST00000511125 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 CD164L2Q6UWJ8 174 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 DAND5Q8N907 189 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
SMAD1-209ENST00000511125 TMEM223A0PJW6 202 aa5.36□□□□□ -1.55
SMAD1-209ENST00000511125 SMIM1B2RUZ4 78 aa5.36□□□□□ -1.55
SMAD1-209ENST00000511125 SMIM6P0DI80 62 aa5.36□□□□□ -1.55
SMAD1-209ENST00000511125 H3BRM9 83 aa5.36□□□□□ -1.55
SMAD1-209ENST00000511125 NFE4Q86UQ8 179 aa5.36□□□□□ -1.55
SMAD1-209ENST00000511125 LGALS3P17931 250 aaKnown RBP5.36□□□□□ -1.55
SMAD1-209ENST00000511125 PFN2P35080 140 aa5.36□□□□□ -1.55
SMAD1-209ENST00000511125 ZNF815PA8K554 130 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 J3QQQ9 107 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 PRSS2P07478 247 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 HERVK_113P61574 105 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 PKIAP61925 76 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 PLEKHB2Q96CS7 222 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 C10orf126Q8N4M7 172 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 DNAH2Q9P225 4427 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 USP17L23D6RBM5 183 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 SEC11AP67812 179 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 UNQ6190/PRO20217Q6UXQ8 127 aa5.35□□□□□ -1.55
SMAD1-209ENST00000511125 A0A087WZ39 114 aa5.34□□□□□ -1.55
SMAD1-209ENST00000511125 ZNF561-AS1K7EIQ3 104 aa5.34□□□□□ -1.55
SMAD1-209ENST00000511125 SPAG11BQ08648 103 aa5.34□□□□□ -1.55
SMAD1-209ENST00000511125 IGHV1-58A0A0C4DH39 117 aa5.34□□□□□ -1.55
SMAD1-209ENST00000511125 COX7B2Q8TF08 81 aa5.34□□□□□ -1.55
SMAD1-209ENST00000511125 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.55
SMAD1-209ENST00000511125 TRAV8-4A0A0B4J246 113 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 CKS1BP61024 79 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 CFAP161Q6P656 301 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 SACSQ9NZJ4 4579 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 MEIG1Q5JSS6 88 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 E9PLD3 99 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 BATFQ16520 125 aa5.33□□□□□ -1.56
SMAD1-209ENST00000511125 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
SMAD1-209ENST00000511125 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
SMAD1-209ENST00000511125 NPSP0C0P6 89 aa5.32□□□□□ -1.56
SMAD1-209ENST00000511125 CAMK2N2Q96S95 79 aa5.32□□□□□ -1.56
SMAD1-209ENST00000511125 LEPROTO15243 131 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 TTC32Q5I0X7 151 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 SLC25A34Q6PIV7 304 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 FRAS1Q86XX4 4008 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 IGLV5-45A0A087WSX0 123 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 SMIM13P0DJ93 91 aa5.31□□□□□ -1.56
SMAD1-209ENST00000511125 LINC00158P58513 81 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms