RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 FAM231DQ6ZW35 169 aa1.9□□□□□ -2.1
CLOCK-209ENST00000511124 SCGB3A1Q96QR1 104 aa1.9□□□□□ -2.1
CLOCK-209ENST00000511124 TRBV6-5A0A0K0K1A5 114 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 H0YIZ8 118 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 MRPS12O15235 138 aaKnown RBP1.9□□□□□ -2.11
CLOCK-209ENST00000511124 TMEM136Q6ZRR5 245 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 SCXQ7RTU7 201 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 MUC4Q99102 2169 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 MXRA5Q9NR99 2828 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 HSBP1L1C9JCN9 74 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.9□□□□□ -2.11
CLOCK-209ENST00000511124 NTF3P20783 257 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 SEC61BP60468 96 aaKnown RBP1.9□□□□□ -2.11
CLOCK-209ENST00000511124 RPL32P62910 135 aaKnown RBP1.9□□□□□ -2.11
CLOCK-209ENST00000511124 HERV-K104P63124 156 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 HIGD2BQ4VC39 106 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 SUMO4Q6EEV6 95 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 AMN1Q8IY45 258 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 DAND5Q8N907 189 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 TYMSOSQ8TAI1 123 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 TMEM170AQ8WVE7 144 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 C11orf52Q96A22 123 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 PLEKHB2Q96CS7 222 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 MRPL35Q9NZE8 188 aaKnown RBP1.9□□□□□ -2.11
CLOCK-209ENST00000511124 CSDC2Q9Y534 153 aaKnown RBP1.9□□□□□ -2.11
CLOCK-209ENST00000511124 FRYQ5TBA9 3013 aa1.9□□□□□ -2.11
CLOCK-209ENST00000511124 A0A087WYN8 130 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 GVQW2A0A096LPI5 108 aaPredicted RBP1.89□□□□□ -2.11
CLOCK-209ENST00000511124 A0A1B0GVY2 172 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 PLAC8L1A1L4L8 177 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 COX6A2Q02221 97 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 GAGE2EQ4V326 116 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 FAM19A4Q96LR4 140 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 GAGE2DQ9UEU5 116 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 LAMTOR3Q9UHA4 124 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 WDFY4Q6ZS81 3184 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 NIPBLQ6KC79 2804 aaeCLIP1.89□□□□□ -2.11
CLOCK-209ENST00000511124 RYR1P21817 5038 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 MYMXA0A1B0GTQ4 84 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 LINC00158P58513 81 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 GCSAMLQ5JQS6 135 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 MRPL52Q86TS9 123 aaKnown RBP1.89□□□□□ -2.11
CLOCK-209ENST00000511124 C9orf62Q8N4C0 152 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 WFDC1Q9HC57 220 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 TMEM238C9JI98 176 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 M0QXV9 152 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 TCL1BO95988 128 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 LINC01547P58512 204 aaPredicted RBP1.89□□□□□ -2.11
CLOCK-209ENST00000511124 MRPS36P82909 103 aaKnown RBP1.89□□□□□ -2.11
CLOCK-209ENST00000511124 IL15RAQ13261 267 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 MPV17L2Q567V2 206 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 COX8CQ7Z4L0 72 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 LINC00526Q96FQ7 95 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 TMEM126AQ9H061 195 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 CST9LQ9H4G1 147 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 TP73-AS1Q9UF72 201 aa1.89□□□□□ -2.11
CLOCK-209ENST00000511124 LINC00959A0A1B0GUT2 108 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 LGALS3P17931 250 aaKnown RBP1.88□□□□□ -2.11
CLOCK-209ENST00000511124 CTRLP40313 264 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 C14orf144Q96I85 54 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 C12orf57Q99622 126 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 CELSR2Q9HCU4 2923 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 COL12A1Q99715 3063 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 C9JQL5 133 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 PLA2G10O15496 165 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 KRTAP10-1P60331 282 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 C5orf38Q86SI9 138 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 SMIM2Q9BVW6 85 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 PLAC8Q9NZF1 115 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 LOC100131303A0A0U1RQF7 123 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 LOC389332A0A1B0GUA5 103 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 F8VRH5 84 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 H3BQ85 93 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 CHTF8P0CG12 524 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 C9orf116Q5BN46 136 aaPredicted RBP1.88□□□□□ -2.11
CLOCK-209ENST00000511124 UQCC3Q6UW78 93 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 FAM19A3Q7Z5A8 133 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 CBLN2Q8IUK8 224 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 HSPB8Q9UJY1 196 aa1.88□□□□□ -2.11
CLOCK-209ENST00000511124 TRBV20-1A0A075B6N2 111 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 HIGD1CA8MV81 97 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 M0QY20 66 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
CLOCK-209ENST00000511124 FAM229BQ4G0N7 80 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 FP248Q71RG6 208 aaPredicted RBP1.87□□□□□ -2.11
CLOCK-209ENST00000511124 FAM19A1Q7Z5A9 133 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 CIRBP-AS1Q8TBR5 109 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 DMBT1Q9UGM3 2413 aaPredicted RBP1.87□□□□□ -2.11
CLOCK-209ENST00000511124 NDUFC2-KCTD14E9PQ53 114 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 HSBP1O75506 76 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 ADCYAP1P18509 176 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 COX17Q14061 63 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 TAL2Q16559 108 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 FAM19A5Q7Z5A7 132 aaPredicted RBP1.87□□□□□ -2.11
CLOCK-209ENST00000511124 PRR34Q9NV39 138 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 PYGO1Q9Y3Y4 419 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 IGKV3D-20A0A0C4DH25 116 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 H0Y8G0 127 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 KIAA1644Q3SXP7 199 aa1.87□□□□□ -2.11
CLOCK-209ENST00000511124 FAM104BQ5XKR9 115 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms