RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 FAM168BA1KXE4 195 aa13.78□□□□□ -0.2
SMAD5-207ENST00000511116 LINC00862A6NCI5 91 aa13.78□□□□□ -0.2
SMAD5-207ENST00000511116 TCAPO15273 167 aa13.78□□□□□ -0.2
SMAD5-207ENST00000511116 C10orf25Q5T742 122 aa13.78□□□□□ -0.2
SMAD5-207ENST00000511116 KRTAP7-1Q8IUC3 87 aa13.78□□□□□ -0.2
SMAD5-207ENST00000511116 A0A087WZ39 114 aa13.77□□□□□ -0.21
SMAD5-207ENST00000511116 NDUFA1O15239 70 aa13.77□□□□□ -0.21
SMAD5-207ENST00000511116 SRP19P09132 144 aaKnown RBP13.77□□□□□ -0.21
SMAD5-207ENST00000511116 RPL39P62891 51 aaKnown RBP13.77□□□□□ -0.21
SMAD5-207ENST00000511116 MRPS36P82909 103 aaKnown RBP13.77□□□□□ -0.21
SMAD5-207ENST00000511116 TMEM241Q24JQ0 296 aa13.77□□□□□ -0.21
SMAD5-207ENST00000511116 EIF5A2Q9GZV4 153 aaKnown RBP13.77□□□□□ -0.21
SMAD5-207ENST00000511116 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
SMAD5-207ENST00000511116 NAT8BQ9UHF3 227 aa13.77□□□□□ -0.21
SMAD5-207ENST00000511116 MUC2Q02817 5179 aa13.76□□□□□ -0.21
SMAD5-207ENST00000511116 C6orf48Q9UBA6 75 aa13.76□□□□□ -0.21
SMAD5-207ENST00000511116 FAM74A3Q4VXF1 159 aa13.74□□□□□ -0.21
SMAD5-207ENST00000511116 UNQ6190/PRO20217Q6UXQ8 127 aa13.74□□□□□ -0.21
SMAD5-207ENST00000511116 SMDT1Q9H4I9 107 aa13.74□□□□□ -0.21
SMAD5-207ENST00000511116 KIAA0087Q14695 138 aa13.73□□□□□ -0.21
SMAD5-207ENST00000511116 SMIM2Q9BVW6 85 aa13.73□□□□□ -0.21
SMAD5-207ENST00000511116 SMIM27A0A1W2PRY6 76 aa13.72□□□□□ -0.21
SMAD5-207ENST00000511116 A0A1B0GW15 77 aa13.71□□□□□ -0.21
SMAD5-207ENST00000511116 TNFRSF6BO95407 300 aa13.71□□□□□ -0.21
SMAD5-207ENST00000511116 CKS2P33552 79 aa13.71□□□□□ -0.21
SMAD5-207ENST00000511116 FAM19A5Q7Z5A7 132 aaPredicted RBP13.71□□□□□ -0.21
SMAD5-207ENST00000511116 RPL23P62829 140 aaKnown RBP13.7□□□□□ -0.22
SMAD5-207ENST00000511116 HBBP68871 147 aa13.7□□□□□ -0.22
SMAD5-207ENST00000511116 IFITM10A6NMD0 228 aa13.69□□□□□ -0.22
SMAD5-207ENST00000511116 GAGE2EQ4V326 116 aa13.68□□□□□ -0.22
SMAD5-207ENST00000511116 GAGE2DQ9UEU5 116 aa13.68□□□□□ -0.22
SMAD5-207ENST00000511116 TRBV30A0A0K0K1B3 111 aa13.67□□□□□ -0.22
SMAD5-207ENST00000511116 M0QXV9 152 aa13.67□□□□□ -0.22
SMAD5-207ENST00000511116 D6R8Y8 96 aa13.66□□□□□ -0.22
SMAD5-207ENST00000511116 RPL13AP40429 203 aaKnown RBP13.66□□□□□ -0.22
SMAD5-207ENST00000511116 TGIF2-C20orf24A0A0A6YYL0 155 aa13.65□□□□□ -0.22
SMAD5-207ENST00000511116 NPYP01303 97 aa13.65□□□□□ -0.22
SMAD5-207ENST00000511116 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
SMAD5-207ENST00000511116 AKAP14Q86UN6 197 aa13.65□□□□□ -0.22
SMAD5-207ENST00000511116 PYGO1Q9Y3Y4 419 aa13.65□□□□□ -0.22
SMAD5-207ENST00000511116 A0A1B0GXF2 115 aa13.64□□□□□ -0.23
SMAD5-207ENST00000511116 NDUFC2-KCTD14E9PQ53 114 aa13.64□□□□□ -0.23
SMAD5-207ENST00000511116 C9orf129Q5T035 196 aaKnown RBP13.64□□□□□ -0.23
SMAD5-207ENST00000511116 CARHSP1Q9Y2V2 147 aaKnown RBP13.64□□□□□ -0.23
SMAD5-207ENST00000511116 PPBPP02775 128 aa13.63□□□□□ -0.23
SMAD5-207ENST00000511116 ADIRFQ15847 76 aa13.63□□□□□ -0.23
SMAD5-207ENST00000511116 UBE2BP63146 152 aa13.62□□□□□ -0.23
SMAD5-207ENST00000511116 LINC01561Q8N1V8 128 aa13.62□□□□□ -0.23
SMAD5-207ENST00000511116 NAT8Q9UHE5 227 aa13.62□□□□□ -0.23
SMAD5-207ENST00000511116 IGLV4-3A0A075B6K6 122 aa13.61□□□□□ -0.23
SMAD5-207ENST00000511116 C9JQL5 133 aa13.61□□□□□ -0.23
SMAD5-207ENST00000511116 F8W036 122 aa13.61□□□□□ -0.23
SMAD5-207ENST00000511116 S100A8P05109 93 aa13.61□□□□□ -0.23
SMAD5-207ENST00000511116 IFI27P40305 119 aaPredicted RBP13.61□□□□□ -0.23
SMAD5-207ENST00000511116 UBE2D1P51668 147 aa13.61□□□□□ -0.23
SMAD5-207ENST00000511116 C2orf82Q6UX34 121 aa13.61□□□□□ -0.23
SMAD5-207ENST00000511116 PRR4Q16378 134 aa13.59□□□□□ -0.23
SMAD5-207ENST00000511116 ZNF861PO60384 105 aa13.58□□□□□ -0.24
SMAD5-207ENST00000511116 MRPL54Q6P161 138 aaKnown RBP13.58□□□□□ -0.24
SMAD5-207ENST00000511116 TMEM141Q96I45 108 aa13.57□□□□□ -0.24
SMAD5-207ENST00000511116 PACRGQ96M98 296 aaPredicted RBP13.57□□□□□ -0.24
SMAD5-207ENST00000511116 PRSS47A8MTI9 375 aa13.56□□□□□ -0.24
SMAD5-207ENST00000511116 ORMDL3Q8N138 153 aa13.56□□□□□ -0.24
SMAD5-207ENST00000511116 RAB5AP20339 215 aa13.55□□□□□ -0.24
SMAD5-207ENST00000511116 NUPR1O60356 82 aa13.53□□□□□ -0.24
SMAD5-207ENST00000511116 TEX43Q6ZNM6 134 aa13.53□□□□□ -0.24
SMAD5-207ENST00000511116 TMEM136Q6ZRR5 245 aa13.53□□□□□ -0.24
SMAD5-207ENST00000511116 LINC00173Q6ZV60 143 aa13.53□□□□□ -0.24
SMAD5-207ENST00000511116 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
SMAD5-207ENST00000511116 SRSF3P84103 164 aaKnown RBP13.52□□□□□ -0.25
SMAD5-207ENST00000511116 ATP5L2Q7Z4Y8 100 aa13.52□□□□□ -0.25
SMAD5-207ENST00000511116 AMELXQ99217 191 aa13.52□□□□□ -0.25
SMAD5-207ENST00000511116 FAM19A3Q7Z5A8 133 aa13.51□□□□□ -0.25
SMAD5-207ENST00000511116 C22orf24Q9Y442 160 aa13.51□□□□□ -0.25
SMAD5-207ENST00000511116 A0A0U1RQV1 116 aa13.5□□□□□ -0.25
SMAD5-207ENST00000511116 NPSP0C0P6 89 aa13.49□□□□□ -0.25
SMAD5-207ENST00000511116 Q6ZN92 141 aa13.49□□□□□ -0.25
SMAD5-207ENST00000511116 Q8IZM0 81 aa13.49□□□□□ -0.25
SMAD5-207ENST00000511116 C2orf88Q9BSF0 95 aa13.49□□□□□ -0.25
SMAD5-207ENST00000511116 LAMTOR2Q9Y2Q5 125 aa13.49□□□□□ -0.25
SMAD5-207ENST00000511116 PEA15Q15121 130 aa13.48□□□□□ -0.25
SMAD5-207ENST00000511116 TP73-AS1Q9UF72 201 aa13.48□□□□□ -0.25
SMAD5-207ENST00000511116 LBHQ53QV2 105 aaPredicted RBP13.47□□□□□ -0.25
SMAD5-207ENST00000511116 ZC2HC1BQ5TFG8 222 aa13.47□□□□□ -0.25
SMAD5-207ENST00000511116 CTDSP1Q9GZU7 261 aa13.47□□□□□ -0.25
SMAD5-207ENST00000511116 CYSLTR1Q9Y271 337 aa13.47□□□□□ -0.25
SMAD5-207ENST00000511116 hCG_2014768A0A024R1R8 64 aa13.46□□□□□ -0.25
SMAD5-207ENST00000511116 A0A087X002 238 aa13.46□□□□□ -0.25
SMAD5-207ENST00000511116 PRSS2P07478 247 aa13.46□□□□□ -0.25
SMAD5-207ENST00000511116 C2orf66Q6UXQ4 117 aa13.46□□□□□ -0.25
SMAD5-207ENST00000511116 KRTAP9-2Q9BYQ4 174 aa13.46□□□□□ -0.25
SMAD5-207ENST00000511116 FAT4Q6V0I7 4981 aa13.46□□□□□ -0.26
SMAD5-207ENST00000511116 CKS1BP61024 79 aa13.45□□□□□ -0.26
SMAD5-207ENST00000511116 LINC00469Q8N7U9 141 aa13.45□□□□□ -0.26
SMAD5-207ENST00000511116 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
SMAD5-207ENST00000511116 IGIPA6NJ69 53 aa13.44□□□□□ -0.26
SMAD5-207ENST00000511116 C6orf226Q5I0X4 101 aa13.44□□□□□ -0.26
SMAD5-207ENST00000511116 LCE2AQ5TA79 106 aaPredicted RBP13.44□□□□□ -0.26
SMAD5-207ENST00000511116 Q8N8P6 123 aa13.44□□□□□ -0.26
SMAD5-207ENST00000511116 MAP1LC3AQ9H492 121 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 267.2 ms