RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 Q6ZSA8 131 aa13.06□□□□□ -0.32
HOXC6-204ENST00000509328 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
HOXC6-204ENST00000509328 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
HOXC6-204ENST00000509328 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
HOXC6-204ENST00000509328 UBE2D1P51668 147 aa13.05□□□□□ -0.32
HOXC6-204ENST00000509328 LINC00242Q5T6M2 205 aa13.05□□□□□ -0.32
HOXC6-204ENST00000509328 ZC2HC1BQ5TFG8 222 aa13.05□□□□□ -0.32
HOXC6-204ENST00000509328 FAM30AQ9NZY2 134 aa13.05□□□□□ -0.32
HOXC6-204ENST00000509328 HSPG2P98160 4391 aa13.05□□□□□ -0.32
HOXC6-204ENST00000509328 COLCA2A8K830 154 aa13.04□□□□□ -0.32
HOXC6-204ENST00000509328 APOMO95445 188 aa13.04□□□□□ -0.32
HOXC6-204ENST00000509328 DNAH8Q96JB1 4490 aa13.03□□□□□ -0.32
HOXC6-204ENST00000509328 ZNF561-AS1K7EIQ3 104 aa13.03□□□□□ -0.32
HOXC6-204ENST00000509328 TRGC2P03986 189 aa13.03□□□□□ -0.32
HOXC6-204ENST00000509328 IGHV3-64A0A075B6Q5 118 aa13.01□□□□□ -0.33
HOXC6-204ENST00000509328 A0A096LNJ9 63 aa13.01□□□□□ -0.33
HOXC6-204ENST00000509328 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
HOXC6-204ENST00000509328 HBDP02042 147 aa13□□□□□ -0.33
HOXC6-204ENST00000509328 COX6A2Q02221 97 aa13□□□□□ -0.33
HOXC6-204ENST00000509328 SDIM1Q6ZPB5 146 aa13□□□□□ -0.33
HOXC6-204ENST00000509328 LINC00526Q96FQ7 95 aa13□□□□□ -0.33
HOXC6-204ENST00000509328 A0A087WZ39 114 aa12.99□□□□□ -0.33
HOXC6-204ENST00000509328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.99□□□□□ -0.33
HOXC6-204ENST00000509328 SCO1O75880 301 aa12.99□□□□□ -0.33
HOXC6-204ENST00000509328 SEC11AP67812 179 aa12.99□□□□□ -0.33
HOXC6-204ENST00000509328 OR10D4PQ8NGN7 298 aa12.99□□□□□ -0.33
HOXC6-204ENST00000509328 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
HOXC6-204ENST00000509328 IGLV4-69A0A075B6H9 119 aa12.98□□□□□ -0.33
HOXC6-204ENST00000509328 HAMPP81172 84 aa12.98□□□□□ -0.33
HOXC6-204ENST00000509328 PMCHL1Q16048 86 aa12.98□□□□□ -0.33
HOXC6-204ENST00000509328 SYCNQ0VAF6 134 aa12.97□□□□□ -0.33
HOXC6-204ENST00000509328 Q8N1X5 172 aa12.97□□□□□ -0.33
HOXC6-204ENST00000509328 ORAOV1Q8WV07 137 aa12.97□□□□□ -0.33
HOXC6-204ENST00000509328 CARD19Q96LW7 228 aa12.97□□□□□ -0.33
HOXC6-204ENST00000509328 HERVK_113P63121 156 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 SPAG11BQ08648 103 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 PMVKQ15126 192 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 PDZD11Q5EBL8 140 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 BAGE3Q86Y29 109 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 LINC01561Q8N1V8 128 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 C2orf48Q96LS8 159 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 CST9LQ9H4G1 147 aa12.96□□□□□ -0.33
HOXC6-204ENST00000509328 GEMIN7Q9H840 131 aaKnown RBP12.95□□□□□ -0.34
HOXC6-204ENST00000509328 A0A0J9YXV3 536 aa12.94□□□□□ -0.34
HOXC6-204ENST00000509328 SCXQ7RTU7 201 aa12.94□□□□□ -0.34
HOXC6-204ENST00000509328 CAMK2N2Q96S95 79 aa12.94□□□□□ -0.34
HOXC6-204ENST00000509328 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
HOXC6-204ENST00000509328 F8WDY8 70 aa12.93□□□□□ -0.34
HOXC6-204ENST00000509328 ATP5LO75964 103 aa12.93□□□□□ -0.34
HOXC6-204ENST00000509328 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
HOXC6-204ENST00000509328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.93□□□□□ -0.34
HOXC6-204ENST00000509328 TINCRA0A1B0GVN0 87 aa12.92□□□□□ -0.34
HOXC6-204ENST00000509328 Q6ZRU5 148 aa12.92□□□□□ -0.34
HOXC6-204ENST00000509328 HSBP1O75506 76 aa12.91□□□□□ -0.34
HOXC6-204ENST00000509328 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
HOXC6-204ENST00000509328 CIRBP-AS1Q8TBR5 109 aa12.91□□□□□ -0.34
HOXC6-204ENST00000509328 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
HOXC6-204ENST00000509328 SMR3BP02814 79 aaPredicted RBP12.9□□□□□ -0.34
HOXC6-204ENST00000509328 NDUFA6P56556 154 aa12.9□□□□□ -0.34
HOXC6-204ENST00000509328 PANO1I0J062 215 aa12.89□□□□□ -0.35
HOXC6-204ENST00000509328 KIAA0087Q14695 138 aa12.89□□□□□ -0.35
HOXC6-204ENST00000509328 LINC00469Q8N7U9 141 aa12.89□□□□□ -0.35
HOXC6-204ENST00000509328 IGLV5-45A0A087WSX0 123 aa12.88□□□□□ -0.35
HOXC6-204ENST00000509328 NDUFA1O15239 70 aa12.88□□□□□ -0.35
HOXC6-204ENST00000509328 SERF1AO75920 110 aa12.88□□□□□ -0.35
HOXC6-204ENST00000509328 S100A1P23297 94 aa12.88□□□□□ -0.35
HOXC6-204ENST00000509328 RNF151Q2KHN1 245 aa12.88□□□□□ -0.35
HOXC6-204ENST00000509328 PACRGQ96M98 296 aaPredicted RBP12.88□□□□□ -0.35
HOXC6-204ENST00000509328 EPM2AB3EWF7 344 aa12.87□□□□□ -0.35
HOXC6-204ENST00000509328 CHTF8P0CG12 524 aa12.87□□□□□ -0.35
HOXC6-204ENST00000509328 SPACA4Q8TDM5 124 aa12.87□□□□□ -0.35
HOXC6-204ENST00000509328 MRPL35Q9NZE8 188 aaKnown RBP12.87□□□□□ -0.35
HOXC6-204ENST00000509328 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
HOXC6-204ENST00000509328 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
HOXC6-204ENST00000509328 LINC00310P59036 64 aa12.86□□□□□ -0.35
HOXC6-204ENST00000509328 FAM19A2Q8N3H0 131 aa12.86□□□□□ -0.35
HOXC6-204ENST00000509328 DPH3Q96FX2 82 aa12.86□□□□□ -0.35
HOXC6-204ENST00000509328 KRTAP4-5Q9BYR2 181 aa12.86□□□□□ -0.35
HOXC6-204ENST00000509328 A0A096LNI7 61 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 IGKV2-24A0A0C4DH68 120 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 FAM229AH3BQW9 127 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 PRSS2P07478 247 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 Q5VSD8 79 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 Q8IZM0 81 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 IFI27L1Q96BM0 104 aa12.85□□□□□ -0.35
HOXC6-204ENST00000509328 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
HOXC6-204ENST00000509328 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
HOXC6-204ENST00000509328 LINC00474Q9P2X8 69 aa12.84□□□□□ -0.35
HOXC6-204ENST00000509328 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
HOXC6-204ENST00000509328 ATP6V1G1O75348 118 aa12.83□□□□□ -0.36
HOXC6-204ENST00000509328 MAJINQ3KP22 176 aa12.83□□□□□ -0.36
HOXC6-204ENST00000509328 C10orf25Q5T742 122 aa12.83□□□□□ -0.36
HOXC6-204ENST00000509328 A0A087WYN8 130 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 H3BRM9 83 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BKO60814 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BJP06899 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BOP23527 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BBP33778 126 aa12.82□□□□□ -0.36
HOXC6-204ENST00000509328 HIST1H2BDP58876 126 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms