RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 IGKV3OR2-268A0A0C4DH90 116 aa7.02□□□□□ -1.29
RFC1-211ENST00000509084 SMIM6P0DI80 62 aa7.02□□□□□ -1.29
RFC1-211ENST00000509084 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
RFC1-211ENST00000509084 UBE2WQ96B02 151 aa7.02□□□□□ -1.29
RFC1-211ENST00000509084 RMI2Q96E14 147 aa7.02□□□□□ -1.29
RFC1-211ENST00000509084 DNAH7Q8WXX0 4024 aa7.02□□□□□ -1.29
RFC1-211ENST00000509084 A0A0J9YXV3 536 aa7.01□□□□□ -1.29
RFC1-211ENST00000509084 PYY3Q5JQD4 70 aa7.01□□□□□ -1.29
RFC1-211ENST00000509084 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
RFC1-211ENST00000509084 ENHOQ6UWT2 76 aa7.01□□□□□ -1.29
RFC1-211ENST00000509084 LINC00476Q8WZB0 136 aa7.01□□□□□ -1.29
RFC1-211ENST00000509084 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
RFC1-211ENST00000509084 NBDYA0A0U1RRE5 68 aa7□□□□□ -1.29
RFC1-211ENST00000509084 C11orf86A6NJI1 115 aa7□□□□□ -1.29
RFC1-211ENST00000509084 HSBP1L1C9JCN9 74 aa7□□□□□ -1.29
RFC1-211ENST00000509084 H3BRM9 83 aa7□□□□□ -1.29
RFC1-211ENST00000509084 HERVK_113P61574 105 aa7□□□□□ -1.29
RFC1-211ENST00000509084 CD164L2Q6UWJ8 174 aa7□□□□□ -1.29
RFC1-211ENST00000509084 PMCHL2Q9BQD1 86 aa7□□□□□ -1.29
RFC1-211ENST00000509084 C1orf43Q9BWL3 253 aa7□□□□□ -1.29
RFC1-211ENST00000509084 COX11Q9Y6N1 276 aa7□□□□□ -1.29
RFC1-211ENST00000509084 LY6G6CO95867 125 aa6.99□□□□□ -1.29
RFC1-211ENST00000509084 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
RFC1-211ENST00000509084 TMEM170BQ5T4T1 132 aa6.99□□□□□ -1.29
RFC1-211ENST00000509084 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
RFC1-211ENST00000509084 LINC00469Q8N7U9 141 aa6.99□□□□□ -1.29
RFC1-211ENST00000509084 CHCHD10Q8WYQ3 142 aaPredicted RBP6.99□□□□□ -1.29
RFC1-211ENST00000509084 XCL1P47992 114 aa6.98□□□□□ -1.29
RFC1-211ENST00000509084 STARD9Q9P2P6 4700 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 IGLV10-54A0A075B6I4 117 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 IGHV3OR16-9A0A0B4J2B5 98 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 S100A12P80511 92 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 Q9HAA7 133 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 CDKN2A-AS1Q9UH64 79 aa6.97□□□□□ -1.29
RFC1-211ENST00000509084 A0A087WZ39 114 aa6.96□□□□□ -1.3
RFC1-211ENST00000509084 GAGE12HA6NDE8 117 aa6.96□□□□□ -1.3
RFC1-211ENST00000509084 COX7A2LO14548 114 aa6.96□□□□□ -1.3
RFC1-211ENST00000509084 APOMO95445 188 aa6.96□□□□□ -1.3
RFC1-211ENST00000509084 COX6A2Q02221 97 aa6.96□□□□□ -1.3
RFC1-211ENST00000509084 ATOH7Q8N100 152 aa6.96□□□□□ -1.3
RFC1-211ENST00000509084 PLECQ15149 4684 aaKnown RBP6.95□□□□□ -1.3
RFC1-211ENST00000509084 TMEM223A0PJW6 202 aa6.95□□□□□ -1.3
RFC1-211ENST00000509084 MALP21145 153 aa6.95□□□□□ -1.3
RFC1-211ENST00000509084 FOXI1Q12951 378 aa6.95□□□□□ -1.3
RFC1-211ENST00000509084 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
RFC1-211ENST00000509084 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
RFC1-211ENST00000509084 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
RFC1-211ENST00000509084 E9PLD3 99 aa6.94□□□□□ -1.3
RFC1-211ENST00000509084 KRTAP26-1Q6PEX3 210 aa6.94□□□□□ -1.3
RFC1-211ENST00000509084 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
RFC1-211ENST00000509084 PLEKHB2Q96CS7 222 aa6.94□□□□□ -1.3
RFC1-211ENST00000509084 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
RFC1-211ENST00000509084 SMIM1B2RUZ4 78 aa6.93□□□□□ -1.3
RFC1-211ENST00000509084 SPINK8P0C7L1 97 aa6.93□□□□□ -1.3
RFC1-211ENST00000509084 CFAP161Q6P656 301 aa6.93□□□□□ -1.3
RFC1-211ENST00000509084 Q6ZR54 194 aa6.93□□□□□ -1.3
RFC1-211ENST00000509084 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 LEPROTO15243 131 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 PSCAO43653 123 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 SPATA45Q537H7 98 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 SFTA2Q6UW10 78 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 C6orf223Q8N319 242 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 STPG4Q8N801 248 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 C12orf57Q99622 126 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
RFC1-211ENST00000509084 VPS13DQ5THJ4 4388 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 LCE6AA0A183 80 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 M0R2N4 97 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 PRSS2P07478 247 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 LGALS3P17931 250 aaKnown RBP6.91□□□□□ -1.3
RFC1-211ENST00000509084 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 Q8IZM0 81 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
RFC1-211ENST00000509084 J3QQQ9 107 aa6.9□□□□□ -1.3
RFC1-211ENST00000509084 CXCL5P42830 114 aa6.9□□□□□ -1.3
RFC1-211ENST00000509084 NMUP48645 174 aa6.9□□□□□ -1.3
RFC1-211ENST00000509084 MAJINQ3KP22 176 aa6.9□□□□□ -1.3
RFC1-211ENST00000509084 C1orf134Q5TEV5 83 aa6.9□□□□□ -1.3
RFC1-211ENST00000509084 LINC00518Q8N0U6 118 aa6.9□□□□□ -1.3
RFC1-211ENST00000509084 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.31
RFC1-211ENST00000509084 F8WDY8 70 aa6.89□□□□□ -1.31
RFC1-211ENST00000509084 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
RFC1-211ENST00000509084 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
RFC1-211ENST00000509084 COX7B2Q8TF08 81 aa6.89□□□□□ -1.31
RFC1-211ENST00000509084 TOMM7Q9P0U1 55 aa6.89□□□□□ -1.31
RFC1-211ENST00000509084 GVQW2A0A096LPI5 108 aaPredicted RBP6.88□□□□□ -1.31
RFC1-211ENST00000509084 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
RFC1-211ENST00000509084 ZNF561-AS1K7EIQ3 104 aa6.88□□□□□ -1.31
RFC1-211ENST00000509084 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
RFC1-211ENST00000509084 TENM2Q9NT68 2774 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 MYMXA0A1B0GTQ4 84 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 NDUFA1O15239 70 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 COX8AP10176 69 aa6.87□□□□□ -1.31
RFC1-211ENST00000509084 CKS1BP61024 79 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms