RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 C9orf116Q5BN46 136 aaPredicted RBP5.21□□□□□ -1.58
COL4A3BP-206ENST00000508809 EIF5AL1Q6IS14 154 aaKnown RBP5.21□□□□□ -1.58
COL4A3BP-206ENST00000508809 IGLV4-69A0A075B6H9 119 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 IGLV5-37A0A075B6J1 123 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 KANTRA0A1W2PQU2 76 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 IFITM10A6NMD0 228 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 C1orf196B1AJZ1 125 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 K7EN84 100 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 APOMO95445 188 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 TSHBP01222 138 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 MT-ND6P03923 174 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 POLR2KP53803 58 aaKnown RBP5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 LBHQ53QV2 105 aaPredicted RBP5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 C1orf137Q5JT78 98 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 SMIM15Q7Z3B0 74 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 C2orf48Q96LS8 159 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 RNASE7Q9H1E1 156 aaKnown RBP5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 VCX2Q9H322 139 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 RPP21Q9H633 154 aaKnown RBP5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 MED9Q9NWA0 146 aa5.2□□□□□ -1.58
COL4A3BP-206ENST00000508809 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
COL4A3BP-206ENST00000508809 BCL2P10415 239 aa5.19□□□□□ -1.58
COL4A3BP-206ENST00000508809 MRAP2Q96G30 205 aa5.19□□□□□ -1.58
COL4A3BP-206ENST00000508809 CSDC2Q9Y534 153 aaKnown RBP5.19□□□□□ -1.58
COL4A3BP-206ENST00000508809 TRBV27A0A0K0K1C4 114 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 COX7A2LO14548 114 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 IGLV7-43P04211 117 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 DIRC1Q969H9 104 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 CAMK2N2Q96S95 79 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 ST20Q9HBF5 79 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 BATF3Q9NR55 127 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 TMEM242Q9NWH2 141 aa5.18□□□□□ -1.58
COL4A3BP-206ENST00000508809 IGLV1-50A0A075B6I6 118 aa5.17□□□□□ -1.58
COL4A3BP-206ENST00000508809 C7orf77A4D0Y5 90 aa5.17□□□□□ -1.58
COL4A3BP-206ENST00000508809 H0Y9J4 135 aa5.17□□□□□ -1.58
COL4A3BP-206ENST00000508809 VCYO14598 125 aa5.17□□□□□ -1.58
COL4A3BP-206ENST00000508809 KRTAP1-4P0C5Y4 121 aa5.17□□□□□ -1.58
COL4A3BP-206ENST00000508809 A8MWL6 223 aa5.16□□□□□ -1.58
COL4A3BP-206ENST00000508809 FAM231DQ6ZW35 169 aa5.16□□□□□ -1.58
COL4A3BP-206ENST00000508809 KRTAP11-1Q8IUC1 163 aa5.16□□□□□ -1.58
COL4A3BP-206ENST00000508809 TSKUQ8WUA8 353 aa5.16□□□□□ -1.58
COL4A3BP-206ENST00000508809 OPRPNQ99935 248 aaPredicted RBP5.16□□□□□ -1.58
COL4A3BP-206ENST00000508809 TMEM191AQ9H0A3 160 aa5.16□□□□□ -1.58
COL4A3BP-206ENST00000508809 GATCO43716 136 aaKnown RBP5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 TLX1NBP0CAT3 122 aa5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 RAB4AP20338 218 aa5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 RPL18AQ02543 176 aaKnown RBP5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 RGS21Q2M5E4 152 aa5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 C5orf38Q86SI9 138 aa5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 MRPL35Q9NZE8 188 aaKnown RBP5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 UBE2D4Q9Y2X8 147 aa5.15□□□□□ -1.59
COL4A3BP-206ENST00000508809 A0A087WZ39 114 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 TRAV13-1A0A0B4J241 112 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 A0A0U1RQV1 116 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 ATP6V1G1O75348 118 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 SNRPEP62304 92 aaKnown RBP5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 SMAGPQ0VAQ4 97 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 OR10D4PQ8NGN7 298 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 IMMP2LQ96T52 175 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 TIMM21Q9BVV7 248 aa5.14□□□□□ -1.59
COL4A3BP-206ENST00000508809 IGHV3OR16-9A0A0B4J2B5 98 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 A0A1B0GUT8 65 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 FAM168BA1KXE4 195 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 SPAG11BQ08648 103 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 TMEM241Q24JQ0 296 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 RNASE13Q5GAN3 156 aaKnown RBP5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 FAM104AQ969W3 186 aa5.13□□□□□ -1.59
COL4A3BP-206ENST00000508809 HIGD1CA8MV81 97 aa5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 TMEM250H0YL14 139 aa5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 PPP1R17O96001 155 aa5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 RPL13AP40429 203 aaKnown RBP5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 PRR4Q16378 134 aa5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 AMN1Q8IY45 258 aa5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 CARHSP1Q9Y2V2 147 aaKnown RBP5.12□□□□□ -1.59
COL4A3BP-206ENST00000508809 FCER1GP30273 86 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 GAGE2EQ4V326 116 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 Q6ZUT4 128 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 BORCS7Q96B45 105 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 KIR2DL4Q99706 377 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 GAGE2DQ9UEU5 116 aa5.11□□□□□ -1.59
COL4A3BP-206ENST00000508809 A0A0U1RRA0 63 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 SMKR1H3BMG3 65 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 NDUFA1O15239 70 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 UNQ6190/PRO20217Q6UXQ8 127 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 SLC51BQ86UW2 128 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 ORAOV1Q8WV07 137 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 SMDT1Q9H4I9 107 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
COL4A3BP-206ENST00000508809 TRBV24-1A0A075B6N3 115 aa5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 PPP1R2P9O14990 202 aa5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 UBE2D1P51668 147 aa5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 RPL32P62910 135 aaKnown RBP5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 MRPS36P82909 103 aaKnown RBP5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 KIAA0087Q14695 138 aa5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 FAM19A5Q7Z5A7 132 aaPredicted RBP5.09□□□□□ -1.59
COL4A3BP-206ENST00000508809 OSTCQ9NRP0 149 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms