RNA–Protein interactions for RNA: ENST00000508492.1

SH3D19-208, Transcript of SH3 domain containing 19, human

TSL 5

Gene SH3D19, Length 698 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3D19-208	ENST00000508492	IFITM2	Q01629	132 aa		4.93	□□□□□ -1.62
SH3D19-208	ENST00000508492	MRPL51	Q4U2R6	128 aa	Known RBP	4.93	□□□□□ -1.62
SH3D19-208	ENST00000508492	ST20	Q9HBF5	79 aa		4.93	□□□□□ -1.62
SH3D19-208	ENST00000508492	NAT8	Q9UHE5	227 aa		4.93	□□□□□ -1.62
SH3D19-208	ENST00000508492	SMIM27	A0A1W2PRY6	76 aa		4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	XCL1	P47992	114 aa		4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	LINC01547	P58512	204 aa	Predicted RBP	4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	CNBP	P62633	177 aa	Known RBP	4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	RIG	Q13278	110 aa		4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	FAM74A3	Q4VXF1	159 aa		4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	MRPL54	Q6P161	138 aa	Known RBP	4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	OR5A1	Q8NGJ0	315 aa		4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	MRAP2	Q96G30	205 aa		4.92	□□□□□ -1.62
SH3D19-208	ENST00000508492	TRBV27	A0A0K0K1C4	114 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	LINC00959	A0A1B0GUT2	108 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492		H7C423	109 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	CCL25	O15444	150 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	RPL37A	P61513	92 aa	Known RBP	4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	PEA15	Q15121	130 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	FAM104B	Q5XKR9	115 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	CD164L2	Q6UWJ8	174 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492		Q6ZUT4	128 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	NAT8B	Q9UHF3	227 aa		4.91	□□□□□ -1.62
SH3D19-208	ENST00000508492	IGHV3-64	A0A075B6Q5	118 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492		A0A087WYN8	130 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492		A0A1B0GXF2	115 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	C7orf77	A4D0Y5	90 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	ZNF25	P17030	456 aa	Predicted RBP	4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	COX6A2	Q02221	97 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	CIRBP	Q14011	172 aa	Known RBP	4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	SPACA4	Q8TDM5	124 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	CDC42SE2	Q9NRR3	84 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492	UBE2D4	Q9Y2X8	147 aa		4.9	□□□□□ -1.63
SH3D19-208	ENST00000508492		A0A096LNI7	61 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	IGKV2-24	A0A0C4DH68	120 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	NPY	P01303	97 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	FCER1G	P30273	86 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	RPL39	P62891	51 aa	Known RBP	4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	MRPL52	Q86TS9	123 aa	Known RBP	4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	ZNF664	Q8N3J9	261 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	FAM104A	Q969W3	186 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	TMEM101	Q96IK0	257 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	BTF3L4	Q96K17	158 aa		4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492	OPRPN	Q99935	248 aa	Predicted RBP	4.89	□□□□□ -1.63
SH3D19-208	ENST00000508492		D6R8Y8	96 aa		4.88	□□□□□ -1.63
SH3D19-208	ENST00000508492	TCAP	O15273	167 aa		4.88	□□□□□ -1.63
SH3D19-208	ENST00000508492	TNXB	P22105	4242 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492		A0A087WZ39	114 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	TRAV13-1	A0A0B4J241	112 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	PHOX2A	O14813	284 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	CKS2	P33552	79 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	HBB	P68871	147 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	MAJIN	Q3KP22	176 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	SMIM2	Q9BVW6	85 aa		4.87	□□□□□ -1.63
SH3D19-208	ENST00000508492	TRBV24-1	A0A075B6N3	115 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	IGHV1-58	A0A0C4DH39	117 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	SS18	Q15532	418 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492		Q6ZRU5	148 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	C5orf38	Q86SI9	138 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	DPH3	Q96FX2	82 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	CARD19	Q96LW7	228 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	KIR2DL4	Q99706	377 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	SMDT1	Q9H4I9	107 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	PLAC8	Q9NZF1	115 aa		4.86	□□□□□ -1.63
SH3D19-208	ENST00000508492	IGLV4-69	A0A075B6H9	119 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492		A0A0J9YXV3	536 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	PPP1R2P9	O14990	202 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	ADCYAP1	P18509	176 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	CLLU1	Q5K131	121 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	ZC2HC1B	Q5TFG8	222 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	PRAC1	Q96KF2	57 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	C20orf78	Q9BR46	151 aa		4.85	□□□□□ -1.63
SH3D19-208	ENST00000508492	LOC389332	A0A1B0GUA5	103 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492		A0A1B0GW15	77 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	LINC00862	A6NCI5	91 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	ATP6V1G1	O75348	118 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	MT1HL1	P0DM35	61 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	RPL32	P62910	135 aa	Known RBP	4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	SYCN	Q0VAF6	134 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	C2orf48	Q96LS8	159 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	PRELID3A	Q96N28	172 aa		4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492	CSDC2	Q9Y534	153 aa	Known RBP	4.84	□□□□□ -1.63
SH3D19-208	ENST00000508492		F8W036	122 aa		4.83	□□□□□ -1.64
SH3D19-208	ENST00000508492	COX7A2L	O14548	114 aa		4.83	□□□□□ -1.64
SH3D19-208	ENST00000508492	PPP1R17	O96001	155 aa		4.83	□□□□□ -1.64
SH3D19-208	ENST00000508492	TMEM136	Q6ZRR5	245 aa		4.83	□□□□□ -1.64
SH3D19-208	ENST00000508492	ORMDL3	Q8N138	153 aa		4.83	□□□□□ -1.64
SH3D19-208	ENST00000508492	TIMM21	Q9BVV7	248 aa		4.83	□□□□□ -1.64
SH3D19-208	ENST00000508492	IGLV4-3	A0A075B6K6	122 aa		4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492		A0A1W2PNN7	141 aa		4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	IFITM10	A6NMD0	228 aa		4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	C1orf196	B1AJZ1	125 aa		4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	OXT	P01178	125 aa		4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	S100A8	P05109	93 aa		4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	PRR3	P79522	188 aa	Known RBP	4.82	□□□□□ -1.64
SH3D19-208	ENST00000508492	SPAG11B	Q08648	103 aa		4.82	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms