RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 AMN1Q8IY45 258 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 C20orf203Q8NBC4 194 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 BORCS7Q96B45 105 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 C2orf48Q96LS8 159 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 CHCHD7Q9BUK0 85 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 NAT8Q9UHE5 227 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 FAT1Q14517 4588 aa2.94□□□□□ -1.94
NUP54-206ENST00000508465 VPS13BQ7Z7G8 4022 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 SMIM27A0A1W2PRY6 76 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 SDHAF1A6NFY7 115 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 UBE2L6O14933 153 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 NDUFS6O75380 124 aaKnown RBP2.93□□□□□ -1.94
NUP54-206ENST00000508465 CRPP02741 224 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 RAB14P61106 215 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 REG3AQ06141 175 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 MRPL54Q6P161 138 aaKnown RBP2.93□□□□□ -1.94
NUP54-206ENST00000508465 RNASEKQ6P5S7 137 aaKnown RBP2.93□□□□□ -1.94
NUP54-206ENST00000508465 OPRPNQ99935 248 aaPredicted RBP2.93□□□□□ -1.94
NUP54-206ENST00000508465 TMEM191AQ9H0A3 160 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 ST20Q9HBF5 79 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 PRR34Q9NV39 138 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 TMEM242Q9NWH2 141 aa2.93□□□□□ -1.94
NUP54-206ENST00000508465 TRBV6-5A0A0K0K1A5 114 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 EPM2AB3EWF7 344 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 I3L3M4 83 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 FGF6P10767 208 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 CKS2P33552 79 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 POLR2KP53803 58 aaKnown RBP2.92□□□□□ -1.94
NUP54-206ENST00000508465 PKIAP61925 76 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 IFITM2Q01629 132 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 MIAQ16674 131 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 MRPL51Q4U2R6 128 aaKnown RBP2.92□□□□□ -1.94
NUP54-206ENST00000508465 Q5VSD8 79 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 FAM104BQ5XKR9 115 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 AMMECR1LQ6DCA0 310 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 STPG4Q8N801 248 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 FRZBQ92765 325 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 MRAP2Q96G30 205 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 TMEM70Q9BUB7 260 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 NAT8BQ9UHF3 227 aa2.92□□□□□ -1.94
NUP54-206ENST00000508465 DNAH8Q96JB1 4490 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 PANO1I0J062 215 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 APCSP02743 223 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 INAFM2P0DMQ5 153 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 ESDP10768 282 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 FCER1GP30273 86 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 XCL1P47992 114 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 SEC61GP60059 68 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 HIGD2BQ4VC39 106 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 RNASE13Q5GAN3 156 aaKnown RBP2.91□□□□□ -1.94
NUP54-206ENST00000508465 DPH3Q96FX2 82 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 SMDT1Q9H4I9 107 aa2.91□□□□□ -1.94
NUP54-206ENST00000508465 TRAV8-4A0A0B4J246 113 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 TRBV27A0A0K0K1C4 114 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 LOC389332A0A1B0GUA5 103 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 LINC00959A0A1B0GUT2 108 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 D6R8Y8 96 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 TCAPO15273 167 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 RPL39P62891 51 aaKnown RBP2.9□□□□□ -1.95
NUP54-206ENST00000508465 HBBP68871 147 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 SDIM1Q6ZPB5 146 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 Q6ZSA8 131 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 SCXQ7RTU7 201 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 OR5A1Q8NGJ0 315 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 CIRBP-AS1Q8TBR5 109 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 CHCHD10Q8WYQ3 142 aaPredicted RBP2.9□□□□□ -1.95
NUP54-206ENST00000508465 LINC00526Q96FQ7 95 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 TMEM101Q96IK0 257 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 BTF3L4Q96K17 158 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 CHAC1Q9BUX1 264 aa2.9□□□□□ -1.95
NUP54-206ENST00000508465 A0A1B0GXF2 115 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 F8W036 122 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 H7C423 109 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 CCL25O15444 150 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 NPYP01303 97 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 MT-ND4LP03901 98 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 CHTF8P0CG12 524 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 KIAA1644Q3SXP7 199 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 CLLU1Q5K131 121 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 TMEM136Q6ZRR5 245 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 ZNF664Q8N3J9 261 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 C15orf56Q8N910 161 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 CDC42SE2Q9NRR3 84 aa2.89□□□□□ -1.95
NUP54-206ENST00000508465 HERC1Q15751 4861 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 TRBV24-1A0A075B6N3 115 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 TRAV13-1A0A0B4J241 112 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 A0A1B0GW15 77 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 TMEM218A2RU14 115 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 C7orf77A4D0Y5 90 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 LINC00862A6NCI5 91 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 PPP1R2P9O14990 202 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 PPP1R17O96001 155 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 S100A8P05109 93 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 SS18Q15532 418 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 C5orf38Q86SI9 138 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 MRPL52Q86TS9 123 aaKnown RBP2.88□□□□□ -1.95
NUP54-206ENST00000508465 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
NUP54-206ENST00000508465 FAM218AQ96MZ4 157 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms