RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CACNA1EQ15878 2313 aa0.84□□□□□ -2.28
TRAPPC13-209ENST00000508304 FAM208BQ5VWN6 2430 aa0.84□□□□□ -2.28
TRAPPC13-209ENST00000508304 KDM3BQ7LBC6 1761 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 LRP6O75581 1613 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 FXYD6-FXYD2A0A087WZ82 144 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 BCE1O60756 84 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 AKAP12Q02952 1782 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 APCP25054 2843 aa0.83□□□□□ -2.28
TRAPPC13-209ENST00000508304 BTAF1O14981 1849 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 POLA1P09884 1462 aaPredicted RBP0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 PLEKHH2Q8IVE3 1493 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 TRBV25-1A0A075B6N4 114 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 C7orf77A4D0Y5 90 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 ASIPP42127 132 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 C10orf113Q5VZT2 155 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 PRDM15P57071 1507 aaPredicted RBP0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 BDP1A6H8Y1 2624 aa0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
TRAPPC13-209ENST00000508304 MAGI1Q96QZ7 1491 aaPredicted RBP0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 ARHGEF12Q9NZN5 1544 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 F8P00451 2351 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 SYS1-DBNDD2H3BUS1 97 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 PIGYQ3MUY2 71 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 ZNF720Q7Z2F6 126 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 SPRR4Q96PI1 79 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 TP53AIP1Q9HCN2 124 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 BAZ1AQ9NRL2 1556 aaPredicted RBP0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 SCN7AQ01118 1682 aa0.81□□□□□ -2.28
TRAPPC13-209ENST00000508304 ADGRL2O95490 1459 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 MEGF8Q7Z7M0 2845 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 SMARCA2P51531 1590 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 A0A087WVE0 104 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 LINC01600Q96MT4 127 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 V9GYS6 101 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 ABCA12Q86UK0 2595 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 RAPGEF2Q9Y4G8 1499 aa0.8□□□□□ -2.28
TRAPPC13-209ENST00000508304 CACNA1CQ13936 2221 aa0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 H3BQF6 201 aa0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 H7BZZ5 65 aa0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 GYPAP02724 150 aa0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 Q8IZM0 81 aa0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 PDCD11Q14690 1871 aaKnown RBP0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 GOLGA4Q13439 2230 aaKnown RBP0.79□□□□□ -2.28
TRAPPC13-209ENST00000508304 PLXNB2O15031 1838 aa0.78□□□□□ -2.28
TRAPPC13-209ENST00000508304 CFDP00746 253 aaPredicted RBP0.78□□□□□ -2.28
TRAPPC13-209ENST00000508304 SPTBN2O15020 2390 aa0.78□□□□□ -2.28
TRAPPC13-209ENST00000508304 POLQO75417 2590 aa0.78□□□□□ -2.28
TRAPPC13-209ENST00000508304 MYO7BQ6PIF6 2116 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 TRBV7-7A0A0K0K1E9 115 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 SMIM11AP58511 58 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 GNGT1P63211 74 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 ETDBQ3ZM63 59 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 LINC00846Q9NV44 126 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 ANKRD26Q9UPS8 1709 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 PLCE1Q9P212 2302 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 TPRP12270 2363 aaKnown RBP0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 PIEZO1Q92508 2521 aa0.77□□□□□ -2.29
TRAPPC13-209ENST00000508304 ABCC2Q92887 1545 aa0.76□□□□□ -2.29
TRAPPC13-209ENST00000508304 C1orf167Q5SNV9 1468 aa0.76□□□□□ -2.29
TRAPPC13-209ENST00000508304 TRBV7-4A0A0J9YYF1 115 aa0.76□□□□□ -2.29
TRAPPC13-209ENST00000508304 C10orf142B7Z368 130 aa0.76□□□□□ -2.29
TRAPPC13-209ENST00000508304 ZFHX3Q15911 3703 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 SPINK1P00995 79 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 PRH1P02810 166 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 Q5BKY6 102 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 DEFB107AQ8IZN7 70 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 LCN9Q8WX39 176 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 NUP188Q5SRE5 1749 aa0.75□□□□□ -2.29
TRAPPC13-209ENST00000508304 ARMS2P0C7Q2 107 aa0.74□□□□□ -2.29
TRAPPC13-209ENST00000508304 GNG2P59768 71 aa0.74□□□□□ -2.29
TRAPPC13-209ENST00000508304 SMR3AQ99954 134 aa0.74□□□□□ -2.29
TRAPPC13-209ENST00000508304 MARF1Q9Y4F3 1742 aaKnown RBP0.74□□□□□ -2.29
TRAPPC13-209ENST00000508304 TTC37Q6PGP7 1564 aa0.74□□□□□ -2.29
TRAPPC13-209ENST00000508304 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 NLRP1Q9C000 1473 aa0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 TROQ12816 1431 aaPredicted RBP0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 CLTCQ00610 1675 aaKnown RBP0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 A0A1B0GU69 56 aa0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 H0Y9P7 68 aa0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 LEPROTL1O95214 131 aa0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 PEA15Q15121 130 aa0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 HMGN3Q15651 99 aa0.73□□□□□ -2.29
TRAPPC13-209ENST00000508304 D6R8Y8 96 aa0.72□□□□□ -2.29
TRAPPC13-209ENST00000508304 F8WEM9 126 aa0.72□□□□□ -2.29
TRAPPC13-209ENST00000508304 C6orf201Q7Z4U5 140 aa0.72□□□□□ -2.29
TRAPPC13-209ENST00000508304 MUSTN1Q8IVN3 82 aa0.72□□□□□ -2.29
TRAPPC13-209ENST00000508304 C2CD3Q4AC94 2353 aa0.72□□□□□ -2.29
TRAPPC13-209ENST00000508304 COL4A6Q14031 1691 aa0.72□□□□□ -2.29
TRAPPC13-209ENST00000508304 FRAS1Q86XX4 4008 aa0.71□□□□□ -2.3
TRAPPC13-209ENST00000508304 SETBP1Q9Y6X0 1596 aa0.71□□□□□ -2.3
TRAPPC13-209ENST00000508304 MUC5BQ9HC84 5762 aaPredicted RBP0.71□□□□□ -2.3
TRAPPC13-209ENST00000508304 USP24Q9UPU5 2620 aa0.71□□□□□ -2.3
TRAPPC13-209ENST00000508304 BIVM-ERCC5R4GMW8 1640 aa0.71□□□□□ -2.3
TRAPPC13-209ENST00000508304 TNCP24821 2201 aa0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 EPRSP07814 1512 aaKnown RBP0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 DOPEY2Q9Y3R5 2298 aa0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 ATP10BO94823 1461 aa0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 PVALEFA0A1B0GWK0 134 aa0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 I3L2K1 104 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms