RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 IGLV2-11P01706 119 aa4.82□□□□□ -1.64
PDGFRA-206ENST00000508170 EDDM3BP56851 147 aa4.82□□□□□ -1.64
PDGFRA-206ENST00000508170 CACNA1HO95180 2353 aa4.82□□□□□ -1.64
PDGFRA-206ENST00000508170 A0A087WSZ3 146 aa4.82□□□□□ -1.64
PDGFRA-206ENST00000508170 IGHV3-53P01767 116 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 ARL14EPLP0DKL9 152 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 TXNDC17Q9BRA2 123 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 FAM208BQ5VWN6 2430 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 TRBV25-1A0A075B6N4 114 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 FAM223BA6NKX1 122 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 F8WEM9 126 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 MIFP14174 115 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 SPINK9Q5DT21 86 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 PSMG4Q5JS54 123 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 Q6ZR03 302 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 RNF5Q99942 180 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 V9GYV3 84 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 FREM1Q5H8C1 2179 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 DOCK10Q96BY6 2186 aa4.81□□□□□ -1.64
PDGFRA-206ENST00000508170 IGLV10-54A0A075B6I4 117 aa4.8□□□□□ -1.64
PDGFRA-206ENST00000508170 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
PDGFRA-206ENST00000508170 CHKB-CPT1BH3BT56 60 aa4.8□□□□□ -1.64
PDGFRA-206ENST00000508170 FXYD3Q14802 87 aa4.8□□□□□ -1.64
PDGFRA-206ENST00000508170 Q8TAT8 98 aa4.8□□□□□ -1.64
PDGFRA-206ENST00000508170 UBALD1Q8TB05 177 aa4.8□□□□□ -1.64
PDGFRA-206ENST00000508170 EP300Q09472 2414 aaPredicted RBP4.79□□□□□ -1.64
PDGFRA-206ENST00000508170 FAM186AA6NE01 2351 aa4.79□□□□□ -1.64
PDGFRA-206ENST00000508170 CELSR3Q9NYQ7 3312 aa4.79□□□□□ -1.64
PDGFRA-206ENST00000508170 TMEM30CPA0ZSE6 113 aa4.79□□□□□ -1.64
PDGFRA-206ENST00000508170 AHCTF1Q8WYP5 2266 aa4.79□□□□□ -1.64
PDGFRA-206ENST00000508170 ZFHX2Q9C0A1 2572 aaPredicted RBP4.79□□□□□ -1.64
PDGFRA-206ENST00000508170 IGKV3D-15A0A087WSY6 115 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 MYMXA0A1B0GTQ4 84 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 DEFB113Q30KQ7 82 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 TYMSOSQ8TAI1 123 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 RIF1Q5UIP0 2472 aaKnown RBP4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 FREM2Q5SZK8 3169 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 AGRNO00468 2067 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 DCHS1Q96JQ0 3298 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 PTPRZ1P23471 2315 aaPredicted RBP4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 ASPMQ8IZT6 3477 aa4.78□□□□□ -1.64
PDGFRA-206ENST00000508170 DNAJC13O75165 2243 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 TRAV10A0A0B4J240 114 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 ACACBO00763 2458 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 MRPL33O75394 65 aaKnown RBP4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 TMEM254Q8TBM7 123 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 IFI27L1Q96BM0 104 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 BAALC-AS2P0C853 105 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 COL27A1Q8IZC6 1860 aaPredicted RBP4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 FRYQ5TBA9 3013 aa4.77□□□□□ -1.65
PDGFRA-206ENST00000508170 ZNF292O60281 2723 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 ASH1LQ9NR48 2969 aaKnown RBP4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 TMSB15BA0A087X1C1 80 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 SMIM27A0A1W2PRY6 76 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 Q8NAQ8 132 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 USP9XQ93008 2570 aaPredicted RBP4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 KNTC1P50748 2209 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 PRRC2CQ9Y520 2896 aaKnown RBP4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 DEFB116Q30KQ4 102 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 SPINK14Q6IE38 97 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 KLF14Q8TD94 323 aaPredicted RBP4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 ESPL1Q14674 2120 aa4.76□□□□□ -1.65
PDGFRA-206ENST00000508170 A0A096LNJ9 63 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 FAM168BA1KXE4 195 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 H3BVH4 76 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 LEPROTL1O95214 131 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 IGLV7-43P04211 117 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 Q5W150 140 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 MAP1BP46821 2468 aaKnown RBP4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 MALRD1Q5VYJ5 2156 aa4.75□□□□□ -1.65
PDGFRA-206ENST00000508170 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 TIMM8BQ9Y5J9 83 aaPredicted RBP4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 SPTBN2O15020 2390 aa4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 GDF5OSQ5U4N7 250 aa4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 TMEM167BQ9NRX6 74 aa4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 TMEM14BQ9NUH8 114 aa4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 GTF3C1Q12789 2109 aa4.74□□□□□ -1.65
PDGFRA-206ENST00000508170 ZNF462Q96JM2 2506 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 NDUFAF8A1L188 74 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 ZNF815PA8K554 130 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 H7C423 109 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 TTTY12Q9BZ98 90 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 IGLV2-18A0A075B6J9 118 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 ODF3BA8MYP8 253 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 COX6CP09669 75 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 CDC42SE2Q9NRR3 84 aa4.73□□□□□ -1.65
PDGFRA-206ENST00000508170 URB1O60287 2271 aaKnown RBP4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 USF3Q68DE3 2245 aa4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 IGHV3-64A0A075B6Q5 118 aa4.72□□□□□ -1.65
PDGFRA-206ENST00000508170 PLGLAQ15195 96 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms