RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 F8W036 122 aa7.1□□□□□ -1.27
HMGCS1-204ENST00000507293 MT-ND4LP03901 98 aa7.1□□□□□ -1.27
HMGCS1-204ENST00000507293 CKS2P33552 79 aa7.1□□□□□ -1.27
HMGCS1-204ENST00000507293 PSORS1C2Q9UIG4 136 aa7.1□□□□□ -1.27
HMGCS1-204ENST00000507293 TRBV24-1A0A075B6N3 115 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 A0A1B0GW15 77 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 TNFRSF6BO95407 300 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 MT-ND6P03923 174 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 RPL32P62910 135 aaKnown RBP7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 PHF5AQ7RTV0 110 aaKnown RBP7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 ORAOV1Q8WV07 137 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 FAM104AQ969W3 186 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 ANAPC16Q96DE5 110 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 LRP2P98164 4655 aa7.09□□□□□ -1.27
HMGCS1-204ENST00000507293 D6R8Y8 96 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 TCAPO15273 167 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 NPYP01303 97 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 S100A8P05109 93 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 RNF151Q2KHN1 245 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 MRPL54Q6P161 138 aaKnown RBP7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 SEC11CQ9BY50 192 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 SPANXA1Q9NS26 97 aa7.08□□□□□ -1.28
HMGCS1-204ENST00000507293 IGHV3OR16-9A0A0B4J2B5 98 aa7.07□□□□□ -1.28
HMGCS1-204ENST00000507293 IFITM10A6NMD0 228 aa7.07□□□□□ -1.28
HMGCS1-204ENST00000507293 C1orf137Q5JT78 98 aa7.07□□□□□ -1.28
HMGCS1-204ENST00000507293 MRPL35Q9NZE8 188 aaKnown RBP7.07□□□□□ -1.28
HMGCS1-204ENST00000507293 A0A1B0GXF2 115 aa7.06□□□□□ -1.28
HMGCS1-204ENST00000507293 NDUFA1O15239 70 aa7.06□□□□□ -1.28
HMGCS1-204ENST00000507293 HBBP68871 147 aa7.06□□□□□ -1.28
HMGCS1-204ENST00000507293 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
HMGCS1-204ENST00000507293 C10orf25Q5T742 122 aa7.06□□□□□ -1.28
HMGCS1-204ENST00000507293 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
HMGCS1-204ENST00000507293 F8WDY8 70 aa7.05□□□□□ -1.28
HMGCS1-204ENST00000507293 IMMP2LQ96T52 175 aa7.05□□□□□ -1.28
HMGCS1-204ENST00000507293 PPBPP02775 128 aa7.04□□□□□ -1.28
HMGCS1-204ENST00000507293 ADCYAP1P18509 176 aa7.04□□□□□ -1.28
HMGCS1-204ENST00000507293 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
HMGCS1-204ENST00000507293 ATP5L2Q7Z4Y8 100 aa7.04□□□□□ -1.28
HMGCS1-204ENST00000507293 CTDSP1Q9GZU7 261 aa7.04□□□□□ -1.28
HMGCS1-204ENST00000507293 C6orf48Q9UBA6 75 aa7.04□□□□□ -1.28
HMGCS1-204ENST00000507293 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 TLX1NBP0CAT3 122 aa7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 C10orf91Q5T1B1 145 aa7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 FAM19A5Q7Z5A7 132 aaPredicted RBP7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 KRTAP11-1Q8IUC1 163 aa7.03□□□□□ -1.28
HMGCS1-204ENST00000507293 A0A087WZ39 114 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 RAB5AP20339 215 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 NDUFA5Q16718 116 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 GAGE2EQ4V326 116 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 ORMDL3Q8N138 153 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 DIRC1Q969H9 104 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 PRELID3AQ96N28 172 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 GAGE2DQ9UEU5 116 aa7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 CARHSP1Q9Y2V2 147 aaKnown RBP7.02□□□□□ -1.29
HMGCS1-204ENST00000507293 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
HMGCS1-204ENST00000507293 S100PP25815 95 aa7.01□□□□□ -1.29
HMGCS1-204ENST00000507293 KIAA0087Q14695 138 aa7.01□□□□□ -1.29
HMGCS1-204ENST00000507293 LINC00242Q5T6M2 205 aa7.01□□□□□ -1.29
HMGCS1-204ENST00000507293 TMEM136Q6ZRR5 245 aa7.01□□□□□ -1.29
HMGCS1-204ENST00000507293 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
HMGCS1-204ENST00000507293 TRAV9-1A0A075B6T8 112 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 H0Y9J4 135 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 M0QXV9 152 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 RHEBQ15382 184 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 C2orf82Q6UX34 121 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 KRTAP7-1Q8IUC3 87 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 TMEM141Q96I45 108 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 PYGO1Q9Y3Y4 419 aa7□□□□□ -1.29
HMGCS1-204ENST00000507293 LOC389332A0A1B0GUA5 103 aa6.99□□□□□ -1.29
HMGCS1-204ENST00000507293 TEX43Q6ZNM6 134 aa6.99□□□□□ -1.29
HMGCS1-204ENST00000507293 RPS10P5Q9NQ39 176 aa6.99□□□□□ -1.29
HMGCS1-204ENST00000507293 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
HMGCS1-204ENST00000507293 TRBV30A0A0K0K1B3 111 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 SNAPINO95295 136 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 APOC3P02656 99 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 UBE2D1P51668 147 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 UBE2BP63146 152 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 SVBPQ8N300 66 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 C2orf88Q9BSF0 95 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 MAP1LC3AQ9H492 121 aa6.98□□□□□ -1.29
HMGCS1-204ENST00000507293 PRSS47A8MTI9 375 aa6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 NDUFC2-KCTD14E9PQ53 114 aa6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 C9orf129Q5T035 196 aaKnown RBP6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 ZC2HC1BQ5TFG8 222 aa6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 LINC00173Q6ZV60 143 aa6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 PACRGQ96M98 296 aaPredicted RBP6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 LAMTOR2Q9Y2Q5 125 aa6.97□□□□□ -1.29
HMGCS1-204ENST00000507293 COX19Q49B96 90 aa6.96□□□□□ -1.3
HMGCS1-204ENST00000507293 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
HMGCS1-204ENST00000507293 Q6ZN92 141 aa6.96□□□□□ -1.3
HMGCS1-204ENST00000507293 LINC01561Q8N1V8 128 aa6.96□□□□□ -1.3
HMGCS1-204ENST00000507293 Q8N8P6 123 aa6.96□□□□□ -1.3
HMGCS1-204ENST00000507293 CYSLTR1Q9Y271 337 aa6.96□□□□□ -1.3
HMGCS1-204ENST00000507293 IGLV1-50A0A075B6I6 118 aa6.95□□□□□ -1.3
HMGCS1-204ENST00000507293 PRSS2P07478 247 aa6.95□□□□□ -1.3
HMGCS1-204ENST00000507293 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms