RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 F8VRH5 84 aa9.43□□□□□ -0.9
RNF4-208ENST00000507247 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
RNF4-208ENST00000507247 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
RNF4-208ENST00000507247 MAPKAPK5-AS1Q8N8E1 139 aa9.43□□□□□ -0.9
RNF4-208ENST00000507247 PMCHL2Q9BQD1 86 aa9.43□□□□□ -0.9
RNF4-208ENST00000507247 MRPL35Q9NZE8 188 aaKnown RBP9.43□□□□□ -0.9
RNF4-208ENST00000507247 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 C11orf86A6NJI1 115 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 C1orf134Q5TEV5 83 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 LINC01545Q5VT33 79 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 PET117Q6UWS5 81 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 OR10D4PQ8NGN7 298 aa9.42□□□□□ -0.9
RNF4-208ENST00000507247 BIRC6Q9NR09 4857 aa9.41□□□□□ -0.9
RNF4-208ENST00000507247 HERVK_113P63121 156 aa9.41□□□□□ -0.9
RNF4-208ENST00000507247 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
RNF4-208ENST00000507247 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
RNF4-208ENST00000507247 IGLV5-45A0A087WSX0 123 aa9.4□□□□□ -0.9
RNF4-208ENST00000507247 SEC11AP67812 179 aa9.4□□□□□ -0.9
RNF4-208ENST00000507247 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
RNF4-208ENST00000507247 GEMIN7Q9H840 131 aaKnown RBP9.4□□□□□ -0.9
RNF4-208ENST00000507247 CDKN2A-AS1Q9UH64 79 aa9.4□□□□□ -0.9
RNF4-208ENST00000507247 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
RNF4-208ENST00000507247 RTL8CO15255 209 aa9.39□□□□□ -0.91
RNF4-208ENST00000507247 ZNF22P17026 224 aaPredicted RBP9.39□□□□□ -0.91
RNF4-208ENST00000507247 PSCAO43653 123 aa9.38□□□□□ -0.91
RNF4-208ENST00000507247 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
RNF4-208ENST00000507247 A0A087WZ39 114 aa9.37□□□□□ -0.91
RNF4-208ENST00000507247 COX7A2LO14548 114 aa9.37□□□□□ -0.91
RNF4-208ENST00000507247 DPM2O94777 84 aa9.37□□□□□ -0.91
RNF4-208ENST00000507247 IGKCP01834 107 aa9.37□□□□□ -0.91
RNF4-208ENST00000507247 WFDC2Q14508 124 aa9.37□□□□□ -0.91
RNF4-208ENST00000507247 LRCOL1A6NCL2 159 aa9.36□□□□□ -0.91
RNF4-208ENST00000507247 PLNP26678 52 aa9.36□□□□□ -0.91
RNF4-208ENST00000507247 TMEM170BQ5T4T1 132 aa9.36□□□□□ -0.91
RNF4-208ENST00000507247 C20orf202A1L168 122 aa9.35□□□□□ -0.91
RNF4-208ENST00000507247 USP17L23D6RBM5 183 aa9.35□□□□□ -0.91
RNF4-208ENST00000507247 LECT2O14960 151 aa9.35□□□□□ -0.91
RNF4-208ENST00000507247 SPINK8P0C7L1 97 aa9.35□□□□□ -0.91
RNF4-208ENST00000507247 C15orf56Q8N910 161 aa9.35□□□□□ -0.91
RNF4-208ENST00000507247 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
RNF4-208ENST00000507247 MALP21145 153 aa9.34□□□□□ -0.91
RNF4-208ENST00000507247 ATOH7Q8N100 152 aa9.34□□□□□ -0.91
RNF4-208ENST00000507247 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
RNF4-208ENST00000507247 TMEM223A0PJW6 202 aa9.33□□□□□ -0.92
RNF4-208ENST00000507247 H3BRM9 83 aa9.33□□□□□ -0.92
RNF4-208ENST00000507247 TNP2Q05952 138 aa9.33□□□□□ -0.92
RNF4-208ENST00000507247 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
RNF4-208ENST00000507247 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
RNF4-208ENST00000507247 LOC105371267A0A1B0GV96 52 aa9.32□□□□□ -0.92
RNF4-208ENST00000507247 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
RNF4-208ENST00000507247 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
RNF4-208ENST00000507247 ORAOV1Q8WV07 137 aa9.32□□□□□ -0.92
RNF4-208ENST00000507247 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
RNF4-208ENST00000507247 DNAH10Q8IVF4 4471 aa9.31□□□□□ -0.92
RNF4-208ENST00000507247 A0A087WTM6 91 aa9.31□□□□□ -0.92
RNF4-208ENST00000507247 AKR1D1P51857 326 aa9.31□□□□□ -0.92
RNF4-208ENST00000507247 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
RNF4-208ENST00000507247 GVQW2A0A096LPI5 108 aaPredicted RBP9.3□□□□□ -0.92
RNF4-208ENST00000507247 IGLV5-39A0A0G2JS06 123 aa9.3□□□□□ -0.92
RNF4-208ENST00000507247 APOMO95445 188 aa9.3□□□□□ -0.92
RNF4-208ENST00000507247 PYY3Q5JQD4 70 aa9.3□□□□□ -0.92
RNF4-208ENST00000507247 CFAP161Q6P656 301 aa9.3□□□□□ -0.92
RNF4-208ENST00000507247 STPG4Q8N801 248 aa9.3□□□□□ -0.92
RNF4-208ENST00000507247 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
RNF4-208ENST00000507247 hDV102S1A0JD36 115 aa9.29□□□□□ -0.92
RNF4-208ENST00000507247 SPAG11BQ08648 103 aa9.29□□□□□ -0.92
RNF4-208ENST00000507247 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
RNF4-208ENST00000507247 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
RNF4-208ENST00000507247 MAJINQ3KP22 176 aa9.28□□□□□ -0.92
RNF4-208ENST00000507247 DNAH2Q9P225 4427 aa9.27□□□□□ -0.93
RNF4-208ENST00000507247 HERVK_113P61574 105 aa9.27□□□□□ -0.93
RNF4-208ENST00000507247 CDPF1Q6NVV7 123 aa9.27□□□□□ -0.93
RNF4-208ENST00000507247 Q8IZM0 81 aa9.27□□□□□ -0.93
RNF4-208ENST00000507247 Q8N814 137 aa9.27□□□□□ -0.93
RNF4-208ENST00000507247 COX7B2Q8TF08 81 aa9.27□□□□□ -0.93
RNF4-208ENST00000507247 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
RNF4-208ENST00000507247 SLPIP03973 132 aa9.26□□□□□ -0.93
RNF4-208ENST00000507247 TSPEAR-AS2P59090 65 aa9.26□□□□□ -0.93
RNF4-208ENST00000507247 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
RNF4-208ENST00000507247 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
RNF4-208ENST00000507247 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
RNF4-208ENST00000507247 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
RNF4-208ENST00000507247 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.25□□□□□ -0.93
RNF4-208ENST00000507247 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
RNF4-208ENST00000507247 E9PLD3 99 aa9.25□□□□□ -0.93
RNF4-208ENST00000507247 LEPROTO15243 131 aa9.25□□□□□ -0.93
RNF4-208ENST00000507247 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
RNF4-208ENST00000507247 DNAH17Q9UFH2 4485 aa9.24□□□□□ -0.93
RNF4-208ENST00000507247 PRSS2P07478 247 aa9.24□□□□□ -0.93
RNF4-208ENST00000507247 FUSP35637 526 aaKnown RBP eCLIP9.24□□□□□ -0.933e-6■□□□□ 10.6
RNF4-208ENST00000507247 C6orf226Q5I0X4 101 aa9.23□□□□□ -0.93
RNF4-208ENST00000507247 C10orf25Q5T742 122 aa9.23□□□□□ -0.93
RNF4-208ENST00000507247 PLEKHB2Q96CS7 222 aa9.23□□□□□ -0.93
RNF4-208ENST00000507247 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
RNF4-208ENST00000507247 J3QQQ9 107 aa9.22□□□□□ -0.93
RNF4-208ENST00000507247 EREGO14944 169 aa9.22□□□□□ -0.93
RNF4-208ENST00000507247 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
RNF4-208ENST00000507247 Q6ZRU5 148 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms