RNA–Protein interactions for RNA: ENST00000507229.5

MIB2-222, Transcript of mindbomb E3 ubiquitin protein ligase 2, human

TSL 2

Gene MIB2, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MIB2-222	ENST00000507229	TMEM258	P61165	79 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	DYNLRB2	Q8TF09	96 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	AKAP9	Q99996	3911 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	NAV2	Q8IVL1	2488 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	FSHB	P01225	129 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	IGHV3-53	P01767	116 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	COX6A2	Q02221	97 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	NF1	P21359	2839 aa		14.11	□□□□□ -0.15
MIB2-222	ENST00000507229	NIPBL	Q6KC79	2804 aa	eCLIP	14.11	□□□□□ -0.15
MIB2-222	ENST00000507229		A0A0U1RRA0	63 aa		14.1	□□□□□ -0.15
MIB2-222	ENST00000507229	ZNF462	Q96JM2	2506 aa		14.1	□□□□□ -0.15
MIB2-222	ENST00000507229	RPL18A	Q02543	176 aa	Known RBP	14.09	□□□□□ -0.15
MIB2-222	ENST00000507229	ZNF625	Q96I27	306 aa	Predicted RBP	14.09	□□□□□ -0.15
MIB2-222	ENST00000507229	PRB1	P04280	392 aa		14.09	□□□□□ -0.15
MIB2-222	ENST00000507229	KRTAP10-9	P60411	292 aa		14.09	□□□□□ -0.15
MIB2-222	ENST00000507229		Q8N2B8	174 aa		14.09	□□□□□ -0.15
MIB2-222	ENST00000507229	C2CD3	Q4AC94	2353 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	DGAT2L7P	Q6IED9	249 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	SON	P18583	2426 aa	Known RBP	14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	CR1	P17927	2039 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	IGKV3D-7	A0A0C4DH55	119 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	DEFB114	Q30KQ6	69 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	C11orf44	Q8N8P7	122 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	C22orf24	Q9Y442	160 aa		14.08	□□□□□ -0.16
MIB2-222	ENST00000507229	INS	P01308	110 aa		14.07	□□□□□ -0.16
MIB2-222	ENST00000507229	BEAN1	Q3B7T3	259 aa		14.06	□□□□□ -0.16
MIB2-222	ENST00000507229	SETD2	Q9BYW2	2564 aa	Predicted RBP	14.05	□□□□□ -0.16
MIB2-222	ENST00000507229	INAFM2	P0DMQ5	153 aa		14.05	□□□□□ -0.16
MIB2-222	ENST00000507229		Q5XG85	94 aa		14.05	□□□□□ -0.16
MIB2-222	ENST00000507229	SERP2	Q8N6R1	65 aa		14.05	□□□□□ -0.16
MIB2-222	ENST00000507229	PIK3CD-AS1	Q5SR53	167 aa		14.05	□□□□□ -0.16
MIB2-222	ENST00000507229	LINC00308	Q8TCZ7	52 aa		14.05	□□□□□ -0.16
MIB2-222	ENST00000507229		A0A087WVE0	104 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229	TRGV1	A0A0A0MS02	117 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229	C4orf3	Q8WVX3	66 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229		Q9HAA7	133 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229	TIMM17B	O60830	172 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229	CIRBP	Q14011	172 aa	Known RBP	14.04	□□□□□ -0.16
MIB2-222	ENST00000507229	FAM218A	Q96MZ4	157 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229	UPK3B	Q9BT76	320 aa		14.04	□□□□□ -0.16
MIB2-222	ENST00000507229		A0A1W2PRX2	142 aa		14.03	□□□□□ -0.16
MIB2-222	ENST00000507229	ODF3L2	Q3SX64	289 aa		14.03	□□□□□ -0.16
MIB2-222	ENST00000507229		Q9H8V8	135 aa		14.03	□□□□□ -0.16
MIB2-222	ENST00000507229	LINC00242	Q5T6M2	205 aa		14.02	□□□□□ -0.16
MIB2-222	ENST00000507229	NDUFA1	O15239	70 aa		14.02	□□□□□ -0.17
MIB2-222	ENST00000507229	C1orf158	Q8N1D5	194 aa		14.02	□□□□□ -0.17
MIB2-222	ENST00000507229	JMJD1C	Q15652	2540 aa		14.02	□□□□□ -0.17
MIB2-222	ENST00000507229	IGLV5-45	A0A087WSX0	123 aa		14	□□□□□ -0.17
MIB2-222	ENST00000507229	DNAL4	O96015	105 aa		14	□□□□□ -0.17
MIB2-222	ENST00000507229		Q6ZTI0	123 aa		14	□□□□□ -0.17
MIB2-222	ENST00000507229	MAL	P21145	153 aa		13.99	□□□□□ -0.17
MIB2-222	ENST00000507229	NTM-AS1	Q6ZSK4	140 aa		13.99	□□□□□ -0.17
MIB2-222	ENST00000507229	STH	Q8IWL8	128 aa		13.99	□□□□□ -0.17
MIB2-222	ENST00000507229	PRIMA1	Q86XR5	153 aa		13.98	□□□□□ -0.17
MIB2-222	ENST00000507229	FAM222A	Q5U5X8	452 aa		13.98	□□□□□ -0.17
MIB2-222	ENST00000507229	SOSTDC1	Q6X4U4	206 aa		13.97	□□□□□ -0.17
MIB2-222	ENST00000507229	SETX	Q7Z333	2677 aa	Known RBP	13.97	□□□□□ -0.17
MIB2-222	ENST00000507229	USP17L23	D6RBM5	183 aa		13.97	□□□□□ -0.17
MIB2-222	ENST00000507229	C14orf132	Q9NPU4	83 aa		13.97	□□□□□ -0.17
MIB2-222	ENST00000507229		Q96MF0	132 aa		13.96	□□□□□ -0.17
MIB2-222	ENST00000507229	IGLV5-39	A0A0G2JS06	123 aa		13.96	□□□□□ -0.17
MIB2-222	ENST00000507229	LINC01561	Q8N1V8	128 aa		13.96	□□□□□ -0.17
MIB2-222	ENST00000507229	NBPF19	A0A087WUL8	3843 aa		13.95	□□□□□ -0.18
MIB2-222	ENST00000507229	SMIM1	B2RUZ4	78 aa		13.95	□□□□□ -0.18
MIB2-222	ENST00000507229	C9orf129	Q5T035	196 aa	Known RBP	13.95	□□□□□ -0.18
MIB2-222	ENST00000507229	LINC00846	Q9NV44	126 aa		13.95	□□□□□ -0.18
MIB2-222	ENST00000507229	RPL36A	P83881	106 aa	Known RBP	13.94	□□□□□ -0.18
MIB2-222	ENST00000507229	MRAP	Q8TCY5	172 aa		13.94	□□□□□ -0.18
MIB2-222	ENST00000507229	RPL36AL	Q969Q0	106 aa	Known RBP	13.94	□□□□□ -0.18
MIB2-222	ENST00000507229	CCDC168	Q8NDH2	2452 aa		13.94	□□□□□ -0.18
MIB2-222	ENST00000507229	USP24	Q9UPU5	2620 aa		13.93	□□□□□ -0.18
MIB2-222	ENST00000507229	UBR5	O95071	2799 aa	Predicted RBP	13.93	□□□□□ -0.18
MIB2-222	ENST00000507229		K7EQD1	137 aa		13.93	□□□□□ -0.18
MIB2-222	ENST00000507229	APC	P25054	2843 aa		13.93	□□□□□ -0.18
MIB2-222	ENST00000507229		Q6JHZ5	121 aa		13.93	□□□□□ -0.18
MIB2-222	ENST00000507229	FHL2	Q14192	279 aa		13.92	□□□□□ -0.18
MIB2-222	ENST00000507229	IL17D	Q8TAD2	202 aa		13.92	□□□□□ -0.18
MIB2-222	ENST00000507229	NOP10	Q9NPE3	64 aa	Known RBP	13.92	□□□□□ -0.18
MIB2-222	ENST00000507229	ITPR3	Q14573	2671 aa		13.92	□□□□□ -0.18
MIB2-222	ENST00000507229	DEFB113	Q30KQ7	82 aa		13.91	□□□□□ -0.18
MIB2-222	ENST00000507229	LOC100131303	A0A0U1RQF7	123 aa		13.9	□□□□□ -0.18
MIB2-222	ENST00000507229	BBC3	Q96PG8	261 aa	Predicted RBP	13.9	□□□□□ -0.18
MIB2-222	ENST00000507229	WFDC10A	Q9H1F0	79 aa		13.9	□□□□□ -0.18
MIB2-222	ENST00000507229	CDC42SE2	Q9NRR3	84 aa		13.9	□□□□□ -0.18
MIB2-222	ENST00000507229	PLA2G2A	P14555	144 aa		13.9	□□□□□ -0.18
MIB2-222	ENST00000507229	IGKV3OR2-268	A0A0C4DH90	116 aa		13.88	□□□□□ -0.19
MIB2-222	ENST00000507229	CCL24	O00175	119 aa		13.88	□□□□□ -0.19
MIB2-222	ENST00000507229	HIST2H2BC	Q6DN03	193 aa		13.88	□□□□□ -0.19
MIB2-222	ENST00000507229	COPS9	Q8WXC6	57 aa		13.88	□□□□□ -0.19
MIB2-222	ENST00000507229	TRBV10-1	A0A0K0K1A3	114 aa		13.86	□□□□□ -0.19
MIB2-222	ENST00000507229	DNAJC9-AS1	A6NH13	148 aa		13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	GIG44	P09565	113 aa	Predicted RBP	13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	PFN2	P35080	140 aa		13.85	□□□□□ -0.19
MIB2-222	ENST00000507229		A0A087WYN8	130 aa		13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	UBE2L6	O14933	153 aa		13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	RPL35A	P18077	110 aa	Known RBP	13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	HILS1	P60008	231 aa		13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	FAM19A3	Q7Z5A8	133 aa		13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	FLNA	P21333	2647 aa	Known RBP	13.85	□□□□□ -0.19
MIB2-222	ENST00000507229	TRGV2	A0A075B6R0	118 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms