RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 RETNLBQ9BQ08 111 aa4.31□□□□□ -1.72
PDE4D-216ENST00000507116 PRRC2CQ9Y520 2896 aaKnown RBP4.31□□□□□ -1.72
PDE4D-216ENST00000507116 IGLV4-3A0A075B6K6 122 aa4.31□□□□□ -1.72
PDE4D-216ENST00000507116 LOC101927531A0A1B0GV80 90 aa4.31□□□□□ -1.72
PDE4D-216ENST00000507116 NANOS2P60321 138 aaKnown RBP4.31□□□□□ -1.72
PDE4D-216ENST00000507116 ZNRF1Q8ND25 227 aa4.31□□□□□ -1.72
PDE4D-216ENST00000507116 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
PDE4D-216ENST00000507116 C11orf21Q9P2W6 132 aa4.31□□□□□ -1.72
PDE4D-216ENST00000507116 PLA2G1BP04054 148 aaKnown RBP4.3□□□□□ -1.72
PDE4D-216ENST00000507116 RP1P56715 2156 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
PDE4D-216ENST00000507116 Q6ZTI0 123 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
PDE4D-216ENST00000507116 ASPMQ8IZT6 3477 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 LOC110117498A0A087WWA1 95 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 PINLYPA6NC86 204 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 BSPH1Q075Z2 132 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 SMIM11BQ8TCY0 68 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 LINC00167Q96N53 147 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 TRBV6-5A0A0K0K1A5 114 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 PDE6GP18545 87 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 B3GALT5-AS1P59052 145 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 Q6ZQT0 140 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 C9orf106Q8NAJ2 232 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 CELA1Q9UNI1 258 aa4.3□□□□□ -1.72
PDE4D-216ENST00000507116 PTPN13Q12923 2485 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 CREBBPQ92793 2442 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 A0A087X002 238 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 C10orf55Q5SWW7 151 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 C9orf47Q6ZRZ4 202 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 C19orf73Q9NVV2 129 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 SLPIP03973 132 aa4.29□□□□□ -1.72
PDE4D-216ENST00000507116 IGHV3-21A0A0B4J1V1 117 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 IGKV1-17P01599 117 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 ELOF1P60002 83 aaKnown RBP4.28□□□□□ -1.72
PDE4D-216ENST00000507116 MUC4Q99102 2169 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 TLN1Q9Y490 2541 aaKnown RBP4.28□□□□□ -1.72
PDE4D-216ENST00000507116 NDUFB1O75438 58 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 ZZEF1O43149 2961 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 USP24Q9UPU5 2620 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 LCE6AA0A183 80 aa4.28□□□□□ -1.72
PDE4D-216ENST00000507116 RPL27AP46776 148 aaKnown RBP4.28□□□□□ -1.72
PDE4D-216ENST00000507116 RPS21P63220 83 aaKnown RBP4.27□□□□□ -1.73
PDE4D-216ENST00000507116 MRPS21P82921 87 aaKnown RBP4.27□□□□□ -1.73
PDE4D-216ENST00000507116 GGNQ86UU5 652 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 MALRD1Q5VYJ5 2156 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 B4DSR2 109 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 HECTD1Q9ULT8 2610 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 SEC16AO15027 2179 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 MAP6D1Q9H9H5 199 aa4.27□□□□□ -1.73
PDE4D-216ENST00000507116 MGAQ8IWI9 3026 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 PRB1P04280 392 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 GYPEP15421 78 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 ZCCHC13Q8WW36 166 aaKnown RBP4.26□□□□□ -1.73
PDE4D-216ENST00000507116 KLK9Q9UKQ9 250 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 AKAP13Q12802 2813 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 BAHCC1Q9P281 2608 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 LRRK2Q5S007 2527 aa4.26□□□□□ -1.73
PDE4D-216ENST00000507116 HELZ2Q9BYK8 2649 aaKnown RBP4.26□□□□□ -1.73
PDE4D-216ENST00000507116 IGHV3-64DA0A0J9YX35 117 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 FSHBP01225 129 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 IGFL4Q6B9Z1 124 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 ZNF843Q8N446 348 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 LINC00476Q8WZB0 136 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 Q9BRP9 147 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 NAV3Q8IVL0 2385 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 I3L2K1 104 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 IGHV1-8P0DP01 117 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 PRB3Q04118 309 aaPredicted RBP4.25□□□□□ -1.73
PDE4D-216ENST00000507116 REG3AQ06141 175 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 FAM74A4Q5TZK3 123 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 B9D2Q9BPU9 175 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 S4R3C0 116 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.25□□□□□ -1.73
PDE4D-216ENST00000507116 F5H697 171 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 CGB3P0DN86 165 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 CGB7P0DN87 165 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 C17orf58Q2M2W7 97 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 C22orf34Q6ZV56 151 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 LINC00208Q96KT6 92 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 SND1-IT1Q9HBX3 110 aa4.25□□□□□ -1.73
PDE4D-216ENST00000507116 CENPEQ02224 2701 aa4.24□□□□□ -1.73
PDE4D-216ENST00000507116 COL12A1Q99715 3063 aa4.24□□□□□ -1.73
PDE4D-216ENST00000507116 LINC00315P59091 139 aa4.24□□□□□ -1.73
PDE4D-216ENST00000507116 NTM-AS1Q6ZSK4 140 aa4.24□□□□□ -1.73
PDE4D-216ENST00000507116 Q8N814 137 aa4.24□□□□□ -1.73
PDE4D-216ENST00000507116 C9orf66Q5T8R8 295 aa4.24□□□□□ -1.73
PDE4D-216ENST00000507116 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 IGLV5-45A0A087WSX0 123 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 LENEPQ9Y5L5 61 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 PRAC2D3DTV9 90 aa4.23□□□□□ -1.73
PDE4D-216ENST00000507116 IGLV1-51P01701 117 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms