RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 C9orf163Q8N9P6 203 aa8.47□□□□□ -1.05
TCOF1-209ENST00000506630 GVQW2A0A096LPI5 108 aaPredicted RBP8.46□□□□□ -1.06
TCOF1-209ENST00000506630 K7EMI3 77 aa8.46□□□□□ -1.06
TCOF1-209ENST00000506630 MALP21145 153 aa8.46□□□□□ -1.06
TCOF1-209ENST00000506630 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
TCOF1-209ENST00000506630 ALKBH7Q9BT30 221 aaPredicted RBP8.46□□□□□ -1.06
TCOF1-209ENST00000506630 PYGO1Q9Y3Y4 419 aa8.46□□□□□ -1.06
TCOF1-209ENST00000506630 IGLV4-3A0A075B6K6 122 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 IGHV3-64A0A075B6Q5 118 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 COX7A2LO14548 114 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 SLPIP03973 132 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 PRSS3P2Q8NHM4 247 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 TMEM141Q96I45 108 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 TRAPPC1Q9Y5R8 145 aa8.45□□□□□ -1.06
TCOF1-209ENST00000506630 Q6ZN92 141 aa8.44□□□□□ -1.06
TCOF1-209ENST00000506630 TEX43Q6ZNM6 134 aa8.44□□□□□ -1.06
TCOF1-209ENST00000506630 SCXQ7RTU7 201 aa8.44□□□□□ -1.06
TCOF1-209ENST00000506630 C5orf38Q86SI9 138 aa8.44□□□□□ -1.06
TCOF1-209ENST00000506630 SLC7A5P1Q8MH63 180 aa8.44□□□□□ -1.06
TCOF1-209ENST00000506630 ZNF561-AS1K7EIQ3 104 aa8.43□□□□□ -1.06
TCOF1-209ENST00000506630 G0S2P27469 103 aa8.43□□□□□ -1.06
TCOF1-209ENST00000506630 LINC00526Q96FQ7 95 aa8.43□□□□□ -1.06
TCOF1-209ENST00000506630 C2orf88Q9BSF0 95 aa8.43□□□□□ -1.06
TCOF1-209ENST00000506630 CHAC1Q9BUX1 264 aa8.43□□□□□ -1.06
TCOF1-209ENST00000506630 SMCO4Q9NRQ5 59 aa8.43□□□□□ -1.06
TCOF1-209ENST00000506630 APOMO95445 188 aa8.42□□□□□ -1.06
TCOF1-209ENST00000506630 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
TCOF1-209ENST00000506630 ZC2HC1BQ5TFG8 222 aa8.41□□□□□ -1.06
TCOF1-209ENST00000506630 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
TCOF1-209ENST00000506630 CIRBP-AS1Q8TBR5 109 aa8.41□□□□□ -1.06
TCOF1-209ENST00000506630 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
TCOF1-209ENST00000506630 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
TCOF1-209ENST00000506630 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
TCOF1-209ENST00000506630 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
TCOF1-209ENST00000506630 NPSP0C0P6 89 aa8.4□□□□□ -1.06
TCOF1-209ENST00000506630 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
TCOF1-209ENST00000506630 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
TCOF1-209ENST00000506630 VCX2Q9H322 139 aa8.4□□□□□ -1.06
TCOF1-209ENST00000506630 IGLV4-69A0A075B6H9 119 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 IGHV3OR16-9A0A0B4J2B5 98 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 PANO1I0J062 215 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 CHTF8P0CG12 524 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 UBE2D1P51668 147 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 COX6A2Q02221 97 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 SPAG11BQ08648 103 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 LINC00242Q5T6M2 205 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 AMELXQ99217 191 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 PLA2G2DQ9UNK4 145 aa8.39□□□□□ -1.07
TCOF1-209ENST00000506630 SYCNQ0VAF6 134 aa8.38□□□□□ -1.07
TCOF1-209ENST00000506630 PAPPA-AS1Q5QFB9 102 aa8.38□□□□□ -1.07
TCOF1-209ENST00000506630 C18orf32Q8TCD1 76 aa8.38□□□□□ -1.07
TCOF1-209ENST00000506630 SCGB3A1Q96QR1 104 aa8.38□□□□□ -1.07
TCOF1-209ENST00000506630 CAMK2N2Q96S95 79 aa8.38□□□□□ -1.07
TCOF1-209ENST00000506630 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
TCOF1-209ENST00000506630 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
TCOF1-209ENST00000506630 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
TCOF1-209ENST00000506630 ERASQ7Z444 233 aa8.37□□□□□ -1.07
TCOF1-209ENST00000506630 OR10D4PQ8NGN7 298 aa8.37□□□□□ -1.07
TCOF1-209ENST00000506630 DPH3Q96FX2 82 aa8.37□□□□□ -1.07
TCOF1-209ENST00000506630 LRP1Q07954 4544 aaKnown RBP8.36□□□□□ -1.07
TCOF1-209ENST00000506630 OXTP01178 125 aa8.36□□□□□ -1.07
TCOF1-209ENST00000506630 CIRBPQ14011 172 aaKnown RBP8.36□□□□□ -1.07
TCOF1-209ENST00000506630 Q6ZRU5 148 aa8.36□□□□□ -1.07
TCOF1-209ENST00000506630 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
TCOF1-209ENST00000506630 C2orf48Q96LS8 159 aa8.36□□□□□ -1.07
TCOF1-209ENST00000506630 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
TCOF1-209ENST00000506630 A0A087WZ39 114 aa8.35□□□□□ -1.07
TCOF1-209ENST00000506630 A0A096LNI7 61 aa8.34□□□□□ -1.07
TCOF1-209ENST00000506630 LINC00614P0C842 121 aa8.34□□□□□ -1.07
TCOF1-209ENST00000506630 RAB5BP61020 215 aa8.34□□□□□ -1.07
TCOF1-209ENST00000506630 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
TCOF1-209ENST00000506630 FAM19A3Q7Z5A8 133 aa8.34□□□□□ -1.07
TCOF1-209ENST00000506630 URB1-AS1Q96HZ7 61 aa8.34□□□□□ -1.07
TCOF1-209ENST00000506630 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.08
TCOF1-209ENST00000506630 A0A087WYN8 130 aa8.33□□□□□ -1.08
TCOF1-209ENST00000506630 NDUFA1O15239 70 aa8.33□□□□□ -1.08
TCOF1-209ENST00000506630 HERVK_113P63121 156 aa8.33□□□□□ -1.08
TCOF1-209ENST00000506630 SEC11AP67812 179 aa8.33□□□□□ -1.08
TCOF1-209ENST00000506630 GEMIN7Q9H840 131 aaKnown RBP8.33□□□□□ -1.08
TCOF1-209ENST00000506630 A0A096LNJ9 63 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 A0A0J9YXV3 536 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
TCOF1-209ENST00000506630 HBDP02042 147 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
TCOF1-209ENST00000506630 PMCHL1Q16048 86 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
TCOF1-209ENST00000506630 RPL18AQ02543 176 aaKnown RBP8.31□□□□□ -1.08
TCOF1-209ENST00000506630 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
TCOF1-209ENST00000506630 STPG4Q8N801 248 aa8.31□□□□□ -1.08
TCOF1-209ENST00000506630 PACRGQ96M98 296 aaPredicted RBP8.31□□□□□ -1.08
TCOF1-209ENST00000506630 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
TCOF1-209ENST00000506630 F8WDY8 70 aa8.3□□□□□ -1.08
TCOF1-209ENST00000506630 PMVKQ15126 192 aa8.3□□□□□ -1.08
TCOF1-209ENST00000506630 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms