RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 LINC01551Q86U37 167 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 GATD1Q8NB37 220 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 TSKUQ8WUA8 353 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 RPL39LQ96EH5 51 aaKnown RBP4.1□□□□□ -1.75
SMAD5-201ENST00000506223 MRAP2Q96G30 205 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 CNFNQ9BYD5 112 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 GFRA4Q9GZZ7 299 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
SMAD5-201ENST00000506223 IGLV4-60A0A075B6I1 120 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
SMAD5-201ENST00000506223 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
SMAD5-201ENST00000506223 PPP1R17O96001 155 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 ZNF25P17030 456 aaPredicted RBP4.09□□□□□ -1.75
SMAD5-201ENST00000506223 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
SMAD5-201ENST00000506223 C20orf203Q8NBC4 194 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 OR5A1Q8NGJ0 315 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 LYPD6BQ8NI32 183 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 CHAC1Q9BUX1 264 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 OSTCQ9NRP0 149 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 NAT8BQ9UHF3 227 aa4.09□□□□□ -1.75
SMAD5-201ENST00000506223 IGHV3-64A0A075B6Q5 118 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 FAM231BA6NCW3 169 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 SRP19P09132 144 aaKnown RBP4.08□□□□□ -1.76
SMAD5-201ENST00000506223 FGF6P10767 208 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 FOXA3P55318 350 aaPredicted RBP4.08□□□□□ -1.76
SMAD5-201ENST00000506223 RAB14P61106 215 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 SS18Q15532 418 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 Q6ZSA8 131 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 AMN1Q8IY45 258 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 KIR2DL4Q99706 377 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 TMEM191AQ9H0A3 160 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 TMEM242Q9NWH2 141 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 NAT8Q9UHE5 227 aa4.08□□□□□ -1.76
SMAD5-201ENST00000506223 A0A1B0GVG6 124 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 C7orf77A4D0Y5 90 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 PPP1R2P9O14990 202 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 NDUFS6O75380 124 aaKnown RBP4.07□□□□□ -1.76
SMAD5-201ENST00000506223 GAS8-AS1O95177 125 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 S100A8P05109 93 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 XCL1P47992 114 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 RPL37AP61513 92 aaKnown RBP4.07□□□□□ -1.76
SMAD5-201ENST00000506223 HIGD2BQ4VC39 106 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 KRTAP7-1Q8IUC3 87 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 C9orf163Q8N9P6 203 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 CIRBP-AS1Q8TBR5 109 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
SMAD5-201ENST00000506223 ISOC2Q96AB3 205 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 PKIGQ9Y2B9 76 aa4.07□□□□□ -1.76
SMAD5-201ENST00000506223 IGLV4-3A0A075B6K6 122 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 TRBV6-5A0A0K0K1A5 114 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 A0A1B0GW15 77 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 F8W036 122 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 RAB4AP20338 218 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 CKS2P33552 79 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 NDUFV3P56181 108 aaKnown RBP4.06□□□□□ -1.76
SMAD5-201ENST00000506223 RPL23P62829 140 aaKnown RBP4.06□□□□□ -1.76
SMAD5-201ENST00000506223 NUP35Q8NFH5 326 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 SMDT1Q9H4I9 107 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 V9GYV3 84 aa4.06□□□□□ -1.76
SMAD5-201ENST00000506223 SMKR1H3BMG3 65 aa4.05□□□□□ -1.76
SMAD5-201ENST00000506223 TCAPO15273 167 aa4.05□□□□□ -1.76
SMAD5-201ENST00000506223 CCL25O15444 150 aa4.05□□□□□ -1.76
SMAD5-201ENST00000506223 RPS10P46783 165 aaKnown RBP4.05□□□□□ -1.76
SMAD5-201ENST00000506223 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
SMAD5-201ENST00000506223 MRPL54Q6P161 138 aaKnown RBP4.05□□□□□ -1.76
SMAD5-201ENST00000506223 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
SMAD5-201ENST00000506223 OCR1Q9BZK8 76 aa4.05□□□□□ -1.76
SMAD5-201ENST00000506223 MUC2Q02817 5179 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 IGKV2-24A0A0C4DH68 120 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 TRBV27A0A0K0K1C4 114 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 LINC00862A6NCI5 91 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 RAB5AP20339 215 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 HBBP68871 147 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 VCX2Q9H322 139 aa4.04□□□□□ -1.76
SMAD5-201ENST00000506223 TRAV13-1A0A0B4J241 112 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 IGHV1-58A0A0C4DH39 117 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 LINC00959A0A1B0GUT2 108 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 SMIM27A0A1W2PRY6 76 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 C1orf196B1AJZ1 125 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 COX7A2LO14548 114 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 APOMO95445 188 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 COX6A2Q02221 97 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 MRPL51Q4U2R6 128 aaKnown RBP4.03□□□□□ -1.76
SMAD5-201ENST00000506223 FAM104BQ5XKR9 115 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 RNF185Q96GF1 192 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 CARD19Q96LW7 228 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 C20orf78Q9BR46 151 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 LINC00474Q9P2X8 69 aa4.03□□□□□ -1.76
SMAD5-201ENST00000506223 GVQW2A0A096LPI5 108 aaPredicted RBP4.02□□□□□ -1.77
SMAD5-201ENST00000506223 KRTAP16-1A8MUX0 517 aa4.02□□□□□ -1.77
SMAD5-201ENST00000506223 D6R8Y8 96 aa4.02□□□□□ -1.77
SMAD5-201ENST00000506223 PPBPP02775 128 aa4.02□□□□□ -1.77
SMAD5-201ENST00000506223 MT-ND4LP03901 98 aa4.02□□□□□ -1.77
SMAD5-201ENST00000506223 CHTF8P0CG12 524 aa4.02□□□□□ -1.77
SMAD5-201ENST00000506223 ESDP10768 282 aa4.02□□□□□ -1.77
SMAD5-201ENST00000506223 HNRNPA3P51991 378 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms