RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 APOMO95445 188 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 PPBPP02775 128 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 RAB5AP20339 215 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 RAB14P61106 215 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 ODF1Q14990 250 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 CLLU1Q5K131 121 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 ORAOV1Q8WV07 137 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 PKIGQ9Y2B9 76 aa11.34□□□□□ -0.59
CCND3-209ENST00000505884 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.33□□□□□ -0.6
CCND3-209ENST00000505884 ATP5L2Q7Z4Y8 100 aa11.33□□□□□ -0.6
CCND3-209ENST00000505884 C2orf48Q96LS8 159 aa11.32□□□□□ -0.6
CCND3-209ENST00000505884 MRPS36P82909 103 aaKnown RBP11.31□□□□□ -0.6
CCND3-209ENST00000505884 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
CCND3-209ENST00000505884 IGHV3OR16-9A0A0B4J2B5 98 aa11.3□□□□□ -0.6
CCND3-209ENST00000505884 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
CCND3-209ENST00000505884 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
CCND3-209ENST00000505884 IGLV4-3A0A075B6K6 122 aa11.29□□□□□ -0.6
CCND3-209ENST00000505884 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
CCND3-209ENST00000505884 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
CCND3-209ENST00000505884 OR10D4PQ8NGN7 298 aa11.29□□□□□ -0.6
CCND3-209ENST00000505884 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
CCND3-209ENST00000505884 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
CCND3-209ENST00000505884 Q6ZRP5 223 aa11.28□□□□□ -0.6
CCND3-209ENST00000505884 PHF5AQ7RTV0 110 aaKnown RBP11.28□□□□□ -0.6
CCND3-209ENST00000505884 ANAPC16Q96DE5 110 aa11.28□□□□□ -0.6
CCND3-209ENST00000505884 MAP1LC3AQ9H492 121 aa11.28□□□□□ -0.6
CCND3-209ENST00000505884 UBR4Q5T4S7 5183 aa11.28□□□□□ -0.6
CCND3-209ENST00000505884 TGIF2-C20orf24A0A0A6YYL0 155 aa11.26□□□□□ -0.61
CCND3-209ENST00000505884 FAM168BA1KXE4 195 aa11.26□□□□□ -0.61
CCND3-209ENST00000505884 NDUFA1O15239 70 aa11.26□□□□□ -0.61
CCND3-209ENST00000505884 LINC00242Q5T6M2 205 aa11.26□□□□□ -0.61
CCND3-209ENST00000505884 TMEM141Q96I45 108 aa11.26□□□□□ -0.61
CCND3-209ENST00000505884 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 SPINK6Q6UWN8 80 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 Q8N8P6 123 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 TNXBP22105 4242 aa11.25□□□□□ -0.61
CCND3-209ENST00000505884 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
CCND3-209ENST00000505884 MRPL35Q9NZE8 188 aaKnown RBP11.24□□□□□ -0.61
CCND3-209ENST00000505884 PSORS1C2Q9UIG4 136 aa11.24□□□□□ -0.61
CCND3-209ENST00000505884 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
CCND3-209ENST00000505884 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
CCND3-209ENST00000505884 MT-ND6P03923 174 aa11.23□□□□□ -0.61
CCND3-209ENST00000505884 SRSF9Q13242 221 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCND3-209ENST00000505884 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
CCND3-209ENST00000505884 KIAA1644Q3SXP7 199 aa11.23□□□□□ -0.61
CCND3-209ENST00000505884 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
CCND3-209ENST00000505884 TEX43Q6ZNM6 134 aa11.23□□□□□ -0.61
CCND3-209ENST00000505884 A0A087WZ39 114 aa11.22□□□□□ -0.61
CCND3-209ENST00000505884 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
CCND3-209ENST00000505884 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
CCND3-209ENST00000505884 CTDSP1Q9GZU7 261 aa11.22□□□□□ -0.61
CCND3-209ENST00000505884 CYSLTR1Q9Y271 337 aa11.22□□□□□ -0.61
CCND3-209ENST00000505884 LAMTOR2Q9Y2Q5 125 aa11.22□□□□□ -0.61
CCND3-209ENST00000505884 ADCYAP1P18509 176 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 UBE2D1P51668 147 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 KIAA0087Q14695 138 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 C1orf137Q5JT78 98 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 REG3GQ6UW15 175 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 UQCC3Q6UW78 93 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 LINC00173Q6ZV60 143 aa11.21□□□□□ -0.61
CCND3-209ENST00000505884 C2orf88Q9BSF0 95 aa11.2□□□□□ -0.62
CCND3-209ENST00000505884 VCX2Q9H322 139 aa11.2□□□□□ -0.62
CCND3-209ENST00000505884 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
CCND3-209ENST00000505884 Q6ZN92 141 aa11.19□□□□□ -0.62
CCND3-209ENST00000505884 TOMM7Q9P0U1 55 aa11.19□□□□□ -0.62
CCND3-209ENST00000505884 KRTAP11-1Q8IUC1 163 aa11.18□□□□□ -0.62
CCND3-209ENST00000505884 F8WDY8 70 aa11.17□□□□□ -0.62
CCND3-209ENST00000505884 AMELXQ99217 191 aa11.17□□□□□ -0.62
CCND3-209ENST00000505884 IGIPA6NJ69 53 aa11.16□□□□□ -0.62
CCND3-209ENST00000505884 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
CCND3-209ENST00000505884 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
CCND3-209ENST00000505884 KRTAP10-8P60410 259 aa11.15□□□□□ -0.62
CCND3-209ENST00000505884 COMMD7Q86VX2 200 aa11.15□□□□□ -0.62
CCND3-209ENST00000505884 KRTAP7-1Q8IUC3 87 aa11.15□□□□□ -0.62
CCND3-209ENST00000505884 PACRGQ96M98 296 aaPredicted RBP11.15□□□□□ -0.62
CCND3-209ENST00000505884 NXT2Q9NPJ8 142 aaKnown RBP11.15□□□□□ -0.62
CCND3-209ENST00000505884 PRSS2P07478 247 aa11.14□□□□□ -0.63
CCND3-209ENST00000505884 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
CCND3-209ENST00000505884 TRBV30A0A0K0K1B3 111 aa11.12□□□□□ -0.63
CCND3-209ENST00000505884 CKS1BP61024 79 aa11.12□□□□□ -0.63
CCND3-209ENST00000505884 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
CCND3-209ENST00000505884 CDKN2A-AS1Q9UH64 79 aa11.12□□□□□ -0.63
CCND3-209ENST00000505884 M0QXV9 152 aa11.11□□□□□ -0.63
CCND3-209ENST00000505884 IGLV7-43P04211 117 aa11.11□□□□□ -0.63
CCND3-209ENST00000505884 UBE2BP63146 152 aa11.11□□□□□ -0.63
CCND3-209ENST00000505884 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
CCND3-209ENST00000505884 TOMM6Q96B49 74 aa11.11□□□□□ -0.63
CCND3-209ENST00000505884 ALKBH7Q9BT30 221 aaPredicted RBP11.11□□□□□ -0.63
CCND3-209ENST00000505884 NDUFC2-KCTD14E9PQ53 114 aa11.1□□□□□ -0.63
CCND3-209ENST00000505884 K7EMI3 77 aa11.1□□□□□ -0.63
CCND3-209ENST00000505884 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
CCND3-209ENST00000505884 SEC11CQ9BY50 192 aa11.1□□□□□ -0.63
CCND3-209ENST00000505884 GEMIN7Q9H840 131 aaKnown RBP11.1□□□□□ -0.63
CCND3-209ENST00000505884 LINC01561Q8N1V8 128 aa11.09□□□□□ -0.63
CCND3-209ENST00000505884 S100PP25815 95 aa11.08□□□□□ -0.64
CCND3-209ENST00000505884 HERVK_113P63121 156 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 157.2 ms