RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 FAM162BQ5T6X4 162 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 SEC22CQ9BRL7 303 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 ALG5Q9Y673 324 aa4.05□□□□□ -1.76
VCAN-206ENST00000505615 A0A087X002 238 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 M0QY20 66 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 IGKV2-30P06310 120 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 FGF6P10767 208 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 GCHFRP30047 84 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 RPL12P30050 165 aaKnown RBP4.04□□□□□ -1.76
VCAN-206ENST00000505615 C4orf26Q17RF5 130 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 SMIM12Q96EX1 92 aa4.04□□□□□ -1.76
VCAN-206ENST00000505615 IGLV7-46A0A075B6I9 117 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 MUC21A0A140T8X8 626 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 RPL32P62910 135 aaKnown RBP4.03□□□□□ -1.76
VCAN-206ENST00000505615 MT1HP80294 61 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 Q6ZVH6 145 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 HIST1H4GQ99525 98 aa4.03□□□□□ -1.76
VCAN-206ENST00000505615 FAM168BA1KXE4 195 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 PEX7O00628 323 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 UBE2L6O14933 153 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 APOMO95445 188 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 CXCL1P09341 107 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 XCL1P47992 114 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 DEFA3P59666 94 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 FAM231DQ6ZW35 169 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 KRTAP7-1Q8IUC3 87 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 GATD1Q8NB37 220 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 WFDC1Q9HC57 220 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 HSPB11Q9Y547 144 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
VCAN-206ENST00000505615 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
VCAN-206ENST00000505615 TCAPO15273 167 aa4.01□□□□□ -1.77
VCAN-206ENST00000505615 CCL25O15444 150 aa4.01□□□□□ -1.77
VCAN-206ENST00000505615 AP1S3Q96PC3 154 aa4.01□□□□□ -1.77
VCAN-206ENST00000505615 SMIM3Q9BZL3 60 aa4.01□□□□□ -1.77
VCAN-206ENST00000505615 ZFP30Q9Y2G7 519 aa4.01□□□□□ -1.77
VCAN-206ENST00000505615 TGIF2-C20orf24A0A0A6YYL0 155 aa4□□□□□ -1.77
VCAN-206ENST00000505615 LINC00959A0A1B0GUT2 108 aa4□□□□□ -1.77
VCAN-206ENST00000505615 A0A1W2PRE2 83 aa4□□□□□ -1.77
VCAN-206ENST00000505615 MGPP08493 103 aa4□□□□□ -1.77
VCAN-206ENST00000505615 CFC1BP0CG36 223 aa4□□□□□ -1.77
VCAN-206ENST00000505615 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
VCAN-206ENST00000505615 SPANXN1Q5VSR9 72 aa4□□□□□ -1.77
VCAN-206ENST00000505615 COMMD7Q86VX2 200 aa4□□□□□ -1.77
VCAN-206ENST00000505615 TYMSOSQ8TAI1 123 aa4□□□□□ -1.77
VCAN-206ENST00000505615 SCGB1C1Q8TD33 95 aa4□□□□□ -1.77
VCAN-206ENST00000505615 BTF3L4Q96K17 158 aa4□□□□□ -1.77
VCAN-206ENST00000505615 TMEM167BQ9NRX6 74 aa4□□□□□ -1.77
VCAN-206ENST00000505615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.99□□□□□ -1.77
VCAN-206ENST00000505615 IGKV2-29A2NJV5 120 aaPredicted RBP3.99□□□□□ -1.77
VCAN-206ENST00000505615 PLA2G10O15496 165 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 SIX6O95475 246 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 LTAP01374 205 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 RASL11AQ6T310 242 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 LINC00173Q6ZV60 143 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 OR5A1Q8NGJ0 315 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 TSKUQ8WUA8 353 aa3.99□□□□□ -1.77
VCAN-206ENST00000505615 OPRPNQ99935 248 aaPredicted RBP3.99□□□□□ -1.77
VCAN-206ENST00000505615 BCL2L11O43521 198 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 ZNF861PO60384 105 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 SMIM17P0DL12 118 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 S100A1P23297 94 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 NDUFV3P56181 108 aaKnown RBP3.98□□□□□ -1.77
VCAN-206ENST00000505615 SMAGPQ0VAQ4 97 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 C1orf195Q5TG92 126 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 AMMECR1LQ6DCA0 310 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 EIF5AL1Q6IS14 154 aaKnown RBP3.98□□□□□ -1.77
VCAN-206ENST00000505615 HIST1H2BAQ96A08 127 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 FMC1Q96HJ9 113 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 CAMK2N2Q96S95 79 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 SIGMAR1Q99720 223 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
VCAN-206ENST00000505615 SMIM1B2RUZ4 78 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 TSTD3H0UI37 97 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 CXorf1O96002 111 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 IL7P13232 177 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 NTF3P20783 257 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 KRTAP13-3Q3SY46 172 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 KIR2DL4Q99706 377 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 NIT2Q9NQR4 276 aa3.97□□□□□ -1.77
VCAN-206ENST00000505615 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
VCAN-206ENST00000505615 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
VCAN-206ENST00000505615 IGHV3OR16-9A0A0B4J2B5 98 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 C19orf71A6NCJ1 209 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 H7C423 109 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 LYRM1O43325 122 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 ESDP10768 282 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 UBE2BP63146 152 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 BIN3Q9NQY0 253 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 ANAPC11Q9NYG5 84 aa3.96□□□□□ -1.78
VCAN-206ENST00000505615 IFNA1P01562 189 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 TLX1NBP0CAT3 122 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 SCGB1A1P11684 91 aa3.95□□□□□ -1.78
VCAN-206ENST00000505615 ZNF25P17030 456 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms