RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 PSMG3Q9BT73 122 aaPredicted RBP-1.34□□□□□ -2.62
SMN2-205ENST00000505346 SBF2Q86WG5 1849 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 BICRAQ9NZM4 1560 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 DNAH11Q96DT5 4516 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 TMEM2Q9UHN6 1383 aa-1.34□□□□□ -2.62
SMN2-205ENST00000505346 PXDNQ92626 1479 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 LINC00694P0DN24 101 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 CCL8P80075 99 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 HIST1H1AQ02539 215 aaPredicted RBP-1.35□□□□□ -2.63
SMN2-205ENST00000505346 Q6JHZ5 121 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 CTAGE3PQ8IX95 158 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 SPTSSAQ969W0 71 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 R4GMQ9 66 aa-1.35□□□□□ -2.63
SMN2-205ENST00000505346 SPEF2Q9C093 1822 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 PRUNE2Q8WUY3 3088 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 TLN2Q9Y4G6 2542 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 DNAH5Q8TE73 4624 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 OVOS2A0A0J9YW53 1432 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 SNCGO76070 127 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 DBIP07108 87 aaKnown RBP-1.36□□□□□ -2.63
SMN2-205ENST00000505346 OVOS2Q6IE36 1432 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 SEC11CQ9BY50 192 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 LINC00472Q9H8W2 130 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 MRPL40Q9NQ50 206 aaKnown RBP-1.36□□□□□ -2.63
SMN2-205ENST00000505346 LRBAP50851 2863 aa-1.36□□□□□ -2.63
SMN2-205ENST00000505346 BPTFQ12830 3046 aa-1.37□□□□□ -2.63
SMN2-205ENST00000505346 PATJQ8NI35 1801 aa-1.37□□□□□ -2.63
SMN2-205ENST00000505346 DOCK2Q92608 1830 aa-1.37□□□□□ -2.63
SMN2-205ENST00000505346 ZFHX3Q15911 3703 aa-1.37□□□□□ -2.63
SMN2-205ENST00000505346 KIF21AQ7Z4S6 1674 aa-1.38□□□□□ -2.63
SMN2-205ENST00000505346 GNG14A0A1W2PPG7 69 aa-1.38□□□□□ -2.63
SMN2-205ENST00000505346 K7EP34 96 aa-1.38□□□□□ -2.63
SMN2-205ENST00000505346 TMEM170BQ5T4T1 132 aa-1.38□□□□□ -2.63
SMN2-205ENST00000505346 SMIM3Q9BZL3 60 aa-1.38□□□□□ -2.63
SMN2-205ENST00000505346 KNDC1Q76NI1 1749 aa-1.38□□□□□ -2.63
SMN2-205ENST00000505346 DISP2A7MBM2 1401 aa-1.39□□□□□ -2.63
SMN2-205ENST00000505346 ARAP2Q8WZ64 1704 aa-1.39□□□□□ -2.63
SMN2-205ENST00000505346 HCG22E2RYF7 251 aa-1.39□□□□□ -2.63
SMN2-205ENST00000505346 NDUFB6O95139 128 aa-1.39□□□□□ -2.63
SMN2-205ENST00000505346 SPANXCQ9NY87 97 aa-1.39□□□□□ -2.63
SMN2-205ENST00000505346 V9GYH0 126 aa-1.39□□□□□ -2.63
SMN2-205ENST00000505346 PRG4Q92954 1404 aaPredicted RBP-1.4□□□□□ -2.63
SMN2-205ENST00000505346 SPTAN1Q13813 2472 aaKnown RBP-1.4□□□□□ -2.63
SMN2-205ENST00000505346 FREM2Q5SZK8 3169 aa-1.4□□□□□ -2.63
SMN2-205ENST00000505346 H3BNG1 76 aa-1.4□□□□□ -2.63
SMN2-205ENST00000505346 SIX6O95475 246 aa-1.4□□□□□ -2.63
SMN2-205ENST00000505346 SMR3BP02814 79 aaPredicted RBP-1.4□□□□□ -2.63
SMN2-205ENST00000505346 AMELXQ99217 191 aa-1.4□□□□□ -2.63
SMN2-205ENST00000505346 IFT140Q96RY7 1462 aa-1.4□□□□□ -2.63
SMN2-205ENST00000505346 TRRAPQ9Y4A5 3859 aa-1.4□□□□□ -2.63
SMN2-205ENST00000505346 CSMD2Q7Z408 3487 aa-1.41□□□□□ -2.63
SMN2-205ENST00000505346 TSPAN19P0C672 248 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 NEFHP12036 1026 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 C10orf128Q5T292 105 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 DEFB123Q8N688 67 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 DEFB105AQ8NG35 78 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 MT1LQ93083 61 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 SELENOSQ9BQE4 189 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 CEP290O15078 2479 aa-1.41□□□□□ -2.64
SMN2-205ENST00000505346 DNAH17Q9UFH2 4485 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 ZNF518AQ6AHZ1 1483 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 SPAARA0A1B0GVQ0 90 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 MT1EP04732 61 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 COX17Q14061 63 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 ALX1Q15699 326 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 KRTAP8-1Q8IUC2 63 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 LENEPQ9Y5L5 61 aa-1.42□□□□□ -2.64
SMN2-205ENST00000505346 TRAV13-2A0A0B4J235 113 aa-1.43□□□□□ -2.64
SMN2-205ENST00000505346 KRTAP19-5Q3LI72 72 aa-1.43□□□□□ -2.64
SMN2-205ENST00000505346 TTC9CQ8N5M4 171 aa-1.43□□□□□ -2.64
SMN2-205ENST00000505346 GAPVD1Q14C86 1478 aa-1.43□□□□□ -2.64
SMN2-205ENST00000505346 CENPEQ02224 2701 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 COL4A6Q14031 1691 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 DNAH10Q8IVF4 4471 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 K7ERU9 68 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 NCR2O95944 276 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 S100A5P33763 92 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 Q6AWC8 147 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 AQP10Q96PS8 301 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 SPANXA1Q9NS26 97 aa-1.44□□□□□ -2.64
SMN2-205ENST00000505346 SMG6Q86US8 1419 aaKnown RBP-1.44□□□□□ -2.64
SMN2-205ENST00000505346 BTAF1O14981 1849 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 J3QR89 54 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 CKS1BP61024 79 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 SCIMPQ6UWF3 145 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 BAGE2Q86Y30 109 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 MAFIPQ8WZ33 124 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 RIMS1Q86UR5 1692 aaKnown RBP-1.45□□□□□ -2.64
SMN2-205ENST00000505346 ARHGEF12Q9NZN5 1544 aa-1.45□□□□□ -2.64
SMN2-205ENST00000505346 TROQ12816 1431 aaPredicted RBP-1.46□□□□□ -2.64
SMN2-205ENST00000505346 SPEGQ15772 3267 aa-1.46□□□□□ -2.64
SMN2-205ENST00000505346 M0R2Z0 102 aa-1.46□□□□□ -2.64
SMN2-205ENST00000505346 CDC42BPGQ6DT37 1551 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 FHAD1B1AJZ9 1412 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 PPIP5K1Q6PFW1 1433 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 F8VRH5 84 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 UQCR11O14957 56 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 MT1FP04733 61 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 C9orf62Q8N4C0 152 aa-1.47□□□□□ -2.64
SMN2-205ENST00000505346 NDUFA4L2Q9NRX3 87 aa-1.47□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms