RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	C9orf116	Q5BN46	136 aa	Predicted RBP	10.18	□□□□□ -0.78
DDR1-256	ENST00000505066	SMIM2	Q9BVW6	85 aa		10.18	□□□□□ -0.78
DDR1-256	ENST00000505066	MRPL54	Q6P161	138 aa	Known RBP	10.17	□□□□□ -0.78
DDR1-256	ENST00000505066	FAT3	Q8TDW7	4589 aa		10.17	□□□□□ -0.78
DDR1-256	ENST00000505066		D6R8Y8	96 aa		10.16	□□□□□ -0.78
DDR1-256	ENST00000505066	C1orf137	Q5JT78	98 aa		10.16	□□□□□ -0.78
DDR1-256	ENST00000505066	OPRPN	Q99935	248 aa	Predicted RBP	10.16	□□□□□ -0.78
DDR1-256	ENST00000505066	MRPL35	Q9NZE8	188 aa	Known RBP	10.16	□□□□□ -0.78
DDR1-256	ENST00000505066	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.15	□□□□□ -0.78
DDR1-256	ENST00000505066	MRPS36	P82909	103 aa	Known RBP	10.15	□□□□□ -0.78
DDR1-256	ENST00000505066	ODF1	Q14990	250 aa		10.15	□□□□□ -0.78
DDR1-256	ENST00000505066	ORMDL3	Q8N138	153 aa		10.15	□□□□□ -0.78
DDR1-256	ENST00000505066		A0A087WZ39	114 aa		10.14	□□□□□ -0.79
DDR1-256	ENST00000505066	RPL39	P62891	51 aa	Known RBP	10.14	□□□□□ -0.79
DDR1-256	ENST00000505066	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
DDR1-256	ENST00000505066		Q6ZN92	141 aa		10.14	□□□□□ -0.79
DDR1-256	ENST00000505066	DIRC1	Q969H9	104 aa		10.14	□□□□□ -0.79
DDR1-256	ENST00000505066		A0A1W2PNN7	141 aa		10.13	□□□□□ -0.79
DDR1-256	ENST00000505066	PACRG	Q96M98	296 aa	Predicted RBP	10.13	□□□□□ -0.79
DDR1-256	ENST00000505066	C2orf88	Q9BSF0	95 aa		10.13	□□□□□ -0.79
DDR1-256	ENST00000505066	PSORS1C2	Q9UIG4	136 aa		10.13	□□□□□ -0.79
DDR1-256	ENST00000505066	UBE2B	P63146	152 aa		10.12	□□□□□ -0.79
DDR1-256	ENST00000505066	TMEM136	Q6ZRR5	245 aa		10.12	□□□□□ -0.79
DDR1-256	ENST00000505066	ATP5L2	Q7Z4Y8	100 aa		10.12	□□□□□ -0.79
DDR1-256	ENST00000505066	PRELID3A	Q96N28	172 aa		10.12	□□□□□ -0.79
DDR1-256	ENST00000505066	PRSS2	P07478	247 aa		10.11	□□□□□ -0.79
DDR1-256	ENST00000505066	PKHD1L1	Q86WI1	4243 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	KRTAP10-8	P60410	259 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	GAGE2E	Q4V326	116 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	TEX43	Q6ZNM6	134 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	PHF5A	Q7RTV0	110 aa	Known RBP	10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	TMEM141	Q96I45	108 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	MAP1LC3A	Q9H492	121 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	GAGE2D	Q9UEU5	116 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	LAMTOR2	Q9Y2Q5	125 aa		10.1	□□□□□ -0.79
DDR1-256	ENST00000505066	NPY	P01303	97 aa		10.09	□□□□□ -0.79
DDR1-256	ENST00000505066	G0S2	P27469	103 aa		10.08	□□□□□ -0.8
DDR1-256	ENST00000505066	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.08	□□□□□ -0.8
DDR1-256	ENST00000505066	CYSLTR1	Q9Y271	337 aa		10.08	□□□□□ -0.8
DDR1-256	ENST00000505066	PYGO1	Q9Y3Y4	419 aa		10.08	□□□□□ -0.8
DDR1-256	ENST00000505066	TRBV30	A0A0K0K1B3	111 aa		10.07	□□□□□ -0.8
DDR1-256	ENST00000505066	IGLV7-43	P04211	117 aa		10.07	□□□□□ -0.8
DDR1-256	ENST00000505066	TLX1NB	P0CAT3	122 aa		10.07	□□□□□ -0.8
DDR1-256	ENST00000505066	CKS1B	P61024	79 aa		10.07	□□□□□ -0.8
DDR1-256	ENST00000505066	PAPPA-AS1	Q5QFB9	102 aa		10.07	□□□□□ -0.8
DDR1-256	ENST00000505066	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.07	□□□□□ -0.8
DDR1-256	ENST00000505066	LOC389332	A0A1B0GUA5	103 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066		A0A1B0GVG6	124 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066		A0A1B0GXF2	115 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066	MT-ND4L	P03901	98 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066	RAB14	P61106	215 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066	VCX2	Q9H322	139 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066	UBR4	Q5T4S7	5183 aa		10.06	□□□□□ -0.8
DDR1-256	ENST00000505066		C9JQL5	133 aa		10.05	□□□□□ -0.8
DDR1-256	ENST00000505066	UBE2D1	P51668	147 aa		10.05	□□□□□ -0.8
DDR1-256	ENST00000505066	SEC11A	P67812	179 aa		10.05	□□□□□ -0.8
DDR1-256	ENST00000505066	PNRC1	Q12796	327 aa	Predicted RBP	10.05	□□□□□ -0.8
DDR1-256	ENST00000505066	ORMDL2	Q53FV1	153 aa		10.05	□□□□□ -0.8
DDR1-256	ENST00000505066		M0QXV9	152 aa		10.04	□□□□□ -0.8
DDR1-256	ENST00000505066	SRSF3	P84103	164 aa	Known RBP	10.04	□□□□□ -0.8
DDR1-256	ENST00000505066	C6orf226	Q5I0X4	101 aa		10.04	□□□□□ -0.8
DDR1-256	ENST00000505066	LINC01561	Q8N1V8	128 aa		10.04	□□□□□ -0.8
DDR1-256	ENST00000505066	ANAPC16	Q96DE5	110 aa		10.04	□□□□□ -0.8
DDR1-256	ENST00000505066	C6orf48	Q9UBA6	75 aa		10.04	□□□□□ -0.8
DDR1-256	ENST00000505066	IGLV4-3	A0A075B6K6	122 aa		10.03	□□□□□ -0.8
DDR1-256	ENST00000505066	NDUFC2-KCTD14	E9PQ53	114 aa		10.03	□□□□□ -0.8
DDR1-256	ENST00000505066		K7EMI3	77 aa		10.03	□□□□□ -0.8
DDR1-256	ENST00000505066	TOMM7	Q9P0U1	55 aa		10.03	□□□□□ -0.8
DDR1-256	ENST00000505066	NPS	P0C0P6	89 aa		10.02	□□□□□ -0.81
DDR1-256	ENST00000505066	LINC00242	Q5T6M2	205 aa		10.02	□□□□□ -0.81
DDR1-256	ENST00000505066	C10orf25	Q5T742	122 aa		10.02	□□□□□ -0.81
DDR1-256	ENST00000505066	C2orf66	Q6UXQ4	117 aa		10.02	□□□□□ -0.81
DDR1-256	ENST00000505066	IGLV1-50	A0A075B6I6	118 aa		10.01	□□□□□ -0.81
DDR1-256	ENST00000505066		H0Y9J4	135 aa		10.01	□□□□□ -0.81
DDR1-256	ENST00000505066	LBH	Q53QV2	105 aa	Predicted RBP	10.01	□□□□□ -0.81
DDR1-256	ENST00000505066		Q8N8P6	123 aa		10.01	□□□□□ -0.81
DDR1-256	ENST00000505066	GEMIN7	Q9H840	131 aa	Known RBP	10.01	□□□□□ -0.81
DDR1-256	ENST00000505066	NXT2	Q9NPJ8	142 aa	Known RBP	10.01	□□□□□ -0.81
DDR1-256	ENST00000505066	FAM168B	A1KXE4	195 aa		10	□□□□□ -0.81
DDR1-256	ENST00000505066	RPL13A	P40429	203 aa	Known RBP	10	□□□□□ -0.81
DDR1-256	ENST00000505066	CTDSP1	Q9GZU7	261 aa		10	□□□□□ -0.81
DDR1-256	ENST00000505066	PRSS47	A8MTI9	375 aa		9.99	□□□□□ -0.81
DDR1-256	ENST00000505066	HERVK_113	P63121	156 aa		9.99	□□□□□ -0.81
DDR1-256	ENST00000505066	ALKBH7	Q9BT30	221 aa	Predicted RBP	9.99	□□□□□ -0.81
DDR1-256	ENST00000505066	C2orf82	Q6UX34	121 aa		9.98	□□□□□ -0.81
DDR1-256	ENST00000505066	PRR26	Q8N8Z3	221 aa		9.98	□□□□□ -0.81
DDR1-256	ENST00000505066	FAM104A	Q969W3	186 aa		9.97	□□□□□ -0.81
DDR1-256	ENST00000505066	KIAA0087	Q14695	138 aa		9.96	□□□□□ -0.82
DDR1-256	ENST00000505066		Q8IZM0	81 aa		9.96	□□□□□ -0.82
DDR1-256	ENST00000505066	LINC01549	A6NIU2	74 aa		9.95	□□□□□ -0.82
DDR1-256	ENST00000505066	CXCL5	P42830	114 aa		9.95	□□□□□ -0.82
DDR1-256	ENST00000505066	NUPR1	O60356	82 aa		9.94	□□□□□ -0.82
DDR1-256	ENST00000505066		F8VRH5	84 aa		9.93	□□□□□ -0.82
DDR1-256	ENST00000505066	AMELX	Q99217	191 aa		9.93	□□□□□ -0.82
DDR1-256	ENST00000505066	LINC00469	Q8N7U9	141 aa		9.92	□□□□□ -0.82
DDR1-256	ENST00000505066	CARHSP1	Q9Y2V2	147 aa	Known RBP	9.92	□□□□□ -0.82
DDR1-256	ENST00000505066	RPL28	P46779	137 aa	Known RBP	9.91	□□□□□ -0.82
DDR1-256	ENST00000505066	C9orf129	Q5T035	196 aa	Known RBP	9.91	□□□□□ -0.82
DDR1-256	ENST00000505066	SCGB3A1	Q96QR1	104 aa		9.91	□□□□□ -0.82

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