RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 C9orf163Q8N9P6 203 aa13.08□□□□□ -0.32
HERC6-205ENST00000504905 C2orf88Q9BSF0 95 aa13.08□□□□□ -0.32
HERC6-205ENST00000504905 VCX2Q9H322 139 aa13.08□□□□□ -0.32
HERC6-205ENST00000504905 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
HERC6-205ENST00000504905 INAFM2P0DMQ5 153 aa13.07□□□□□ -0.32
HERC6-205ENST00000504905 PAPPA-AS1Q5QFB9 102 aa13.07□□□□□ -0.32
HERC6-205ENST00000504905 C5orf38Q86SI9 138 aa13.07□□□□□ -0.32
HERC6-205ENST00000504905 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
HERC6-205ENST00000504905 LINC01549A6NIU2 74 aa13.06□□□□□ -0.32
HERC6-205ENST00000504905 SLPIP03973 132 aa13.06□□□□□ -0.32
HERC6-205ENST00000504905 Q6ZSA8 131 aa13.06□□□□□ -0.32
HERC6-205ENST00000504905 SCGB3A1Q96QR1 104 aa13.06□□□□□ -0.32
HERC6-205ENST00000504905 AMELXQ99217 191 aa13.06□□□□□ -0.32
HERC6-205ENST00000504905 HAMPP81172 84 aa13.05□□□□□ -0.32
HERC6-205ENST00000504905 ZC2HC1BQ5TFG8 222 aa13.05□□□□□ -0.32
HERC6-205ENST00000504905 ZNF561-AS1K7EIQ3 104 aa13.04□□□□□ -0.32
HERC6-205ENST00000504905 APOMO95445 188 aa13.04□□□□□ -0.32
HERC6-205ENST00000504905 TRGC2P03986 189 aa13.04□□□□□ -0.32
HERC6-205ENST00000504905 LINC00614P0C842 121 aa13.04□□□□□ -0.32
HERC6-205ENST00000504905 LINC00173Q6ZV60 143 aa13.04□□□□□ -0.32
HERC6-205ENST00000504905 ERASQ7Z444 233 aa13.04□□□□□ -0.32
HERC6-205ENST00000504905 IGHV3OR16-9A0A0B4J2B5 98 aa13.03□□□□□ -0.32
HERC6-205ENST00000504905 UBE2D1P51668 147 aa13.03□□□□□ -0.32
HERC6-205ENST00000504905 RAB5BP61020 215 aa13.03□□□□□ -0.32
HERC6-205ENST00000504905 FAT1Q14517 4588 aa13.03□□□□□ -0.32
HERC6-205ENST00000504905 IGHV3-64A0A075B6Q5 118 aa13.02□□□□□ -0.33
HERC6-205ENST00000504905 LINC00242Q5T6M2 205 aa13.02□□□□□ -0.33
HERC6-205ENST00000504905 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
HERC6-205ENST00000504905 URB1-AS1Q96HZ7 61 aa13.01□□□□□ -0.33
HERC6-205ENST00000504905 VPS13BQ7Z7G8 4022 aa13.01□□□□□ -0.33
HERC6-205ENST00000504905 COX6A2Q02221 97 aa13□□□□□ -0.33
HERC6-205ENST00000504905 MYCBP2O75592 4640 aa13□□□□□ -0.33
HERC6-205ENST00000504905 SDIM1Q6ZPB5 146 aa12.99□□□□□ -0.33
HERC6-205ENST00000504905 IGLV4-69A0A075B6H9 119 aa12.98□□□□□ -0.33
HERC6-205ENST00000504905 Q5VSD8 79 aa12.98□□□□□ -0.33
HERC6-205ENST00000504905 OR10D4PQ8NGN7 298 aa12.98□□□□□ -0.33
HERC6-205ENST00000504905 ORAOV1Q8WV07 137 aa12.98□□□□□ -0.33
HERC6-205ENST00000504905 CARD19Q96LW7 228 aa12.98□□□□□ -0.33
HERC6-205ENST00000504905 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
HERC6-205ENST00000504905 A0A087WZ39 114 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 HBDP02042 147 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 SEC11AP67812 179 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 SPAG11BQ08648 103 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 SYCNQ0VAF6 134 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 PMCHL1Q16048 86 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 SCXQ7RTU7 201 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 FAM19A3Q7Z5A8 133 aa12.97□□□□□ -0.33
HERC6-205ENST00000504905 SRRM2Q9UQ35 2752 aaKnown RBP12.96□□□□□ -0.33
HERC6-205ENST00000504905 A0A096LNJ9 63 aa12.96□□□□□ -0.33
HERC6-205ENST00000504905 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.96□□□□□ -0.33
HERC6-205ENST00000504905 SMR3BP02814 79 aaPredicted RBP12.96□□□□□ -0.33
HERC6-205ENST00000504905 HERVK_113P63121 156 aa12.95□□□□□ -0.34
HERC6-205ENST00000504905 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
HERC6-205ENST00000504905 CAMK2N2Q96S95 79 aa12.95□□□□□ -0.34
HERC6-205ENST00000504905 GEMIN7Q9H840 131 aaKnown RBP12.95□□□□□ -0.34
HERC6-205ENST00000504905 DNAH8Q96JB1 4490 aa12.94□□□□□ -0.34
HERC6-205ENST00000504905 PMVKQ15126 192 aa12.94□□□□□ -0.34
HERC6-205ENST00000504905 CHCHD1Q96BP2 118 aaKnown RBP12.94□□□□□ -0.34
HERC6-205ENST00000504905 CST9LQ9H4G1 147 aa12.94□□□□□ -0.34
HERC6-205ENST00000504905 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
HERC6-205ENST00000504905 A0A0J9YXV3 536 aa12.93□□□□□ -0.34
HERC6-205ENST00000504905 BAGE3Q86Y29 109 aa12.93□□□□□ -0.34
HERC6-205ENST00000504905 LINC01561Q8N1V8 128 aa12.93□□□□□ -0.34
HERC6-205ENST00000504905 CIRBP-AS1Q8TBR5 109 aa12.93□□□□□ -0.34
HERC6-205ENST00000504905 PKIGQ9Y2B9 76 aa12.93□□□□□ -0.34
HERC6-205ENST00000504905 PDZD11Q5EBL8 140 aa12.92□□□□□ -0.34
HERC6-205ENST00000504905 Q6ZRU5 148 aa12.92□□□□□ -0.34
HERC6-205ENST00000504905 PANO1I0J062 215 aa12.91□□□□□ -0.34
HERC6-205ENST00000504905 TINCRA0A1B0GVN0 87 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 F8WDY8 70 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 ATP5LO75964 103 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 CHTF8P0CG12 524 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 NDUFA6P56556 154 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 DPH3Q96FX2 82 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 CDKN2A-AS1Q9UH64 79 aa12.9□□□□□ -0.34
HERC6-205ENST00000504905 FAM229AH3BQW9 127 aa12.89□□□□□ -0.35
HERC6-205ENST00000504905 CIRBPQ14011 172 aaKnown RBP12.89□□□□□ -0.35
HERC6-205ENST00000504905 LINC00469Q8N7U9 141 aa12.89□□□□□ -0.35
HERC6-205ENST00000504905 PACRGQ96M98 296 aaPredicted RBP12.89□□□□□ -0.35
HERC6-205ENST00000504905 IGKV2-24A0A0C4DH68 120 aa12.88□□□□□ -0.35
HERC6-205ENST00000504905 NDUFA1O15239 70 aa12.88□□□□□ -0.35
HERC6-205ENST00000504905 HSBP1O75506 76 aa12.88□□□□□ -0.35
HERC6-205ENST00000504905 SPACA4Q8TDM5 124 aa12.88□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BHQ93079 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BNQ99877 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 HIST1H2BMQ99879 126 aa12.87□□□□□ -0.35
HERC6-205ENST00000504905 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
HERC6-205ENST00000504905 A0A096LNI7 61 aa12.86□□□□□ -0.35
HERC6-205ENST00000504905 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
HERC6-205ENST00000504905 PRSS2P07478 247 aa12.86□□□□□ -0.35
HERC6-205ENST00000504905 KIAA0087Q14695 138 aa12.86□□□□□ -0.35
HERC6-205ENST00000504905 LINC00528Q8N1L1 170 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms