RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 IGLV10-54A0A075B6I4 117 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 IGLV4-3A0A075B6K6 122 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 J3QL48 77 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 ATP5LO75964 103 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 HBDP02042 147 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 CHAC1Q9BUX1 264 aa8.08□□□□□ -1.12
PDGFRA-204ENST00000504461 TRAV13-1A0A0B4J241 112 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 GAGE12HA6NDE8 117 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 HSBP1O75506 76 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 KRTAP26-1Q6PEX3 210 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 Q6ZUT4 128 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 AMELXQ99217 191 aa8.07□□□□□ -1.12
PDGFRA-204ENST00000504461 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
PDGFRA-204ENST00000504461 XCL1P47992 114 aa8.06□□□□□ -1.12
PDGFRA-204ENST00000504461 CIRBP-AS1Q8TBR5 109 aa8.06□□□□□ -1.12
PDGFRA-204ENST00000504461 FAM104AQ969W3 186 aa8.06□□□□□ -1.12
PDGFRA-204ENST00000504461 URB1-AS1Q96HZ7 61 aa8.06□□□□□ -1.12
PDGFRA-204ENST00000504461 COX7A2LO14548 114 aa8.05□□□□□ -1.12
PDGFRA-204ENST00000504461 APOMO95445 188 aa8.05□□□□□ -1.12
PDGFRA-204ENST00000504461 PRSS1P07477 247 aa8.05□□□□□ -1.12
PDGFRA-204ENST00000504461 FOXI1Q12951 378 aa8.05□□□□□ -1.12
PDGFRA-204ENST00000504461 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
PDGFRA-204ENST00000504461 FAT1Q14517 4588 aa8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 MALP21145 153 aa8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 PMVKQ15126 192 aa8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 PDZD11Q5EBL8 140 aa8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 CST9LQ9H4G1 147 aa8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 FLG2Q5D862 2391 aaPredicted RBP8.04□□□□□ -1.12
PDGFRA-204ENST00000504461 IGHV1-58A0A0C4DH39 117 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BKO60814 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BJP06899 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BOP23527 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BBP33778 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 UBE2D1P51668 147 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BDP58876 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BCP62807 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HERVK_113P63121 156 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST2H2BEQ16778 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 LINC01561Q8N1V8 128 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BHQ93079 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BNQ99877 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 HIST1H2BMQ99879 126 aa8.03□□□□□ -1.12
PDGFRA-204ENST00000504461 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 A0A096LNJ9 63 aa8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 IGHV3OR16-9A0A0B4J2B5 98 aa8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 SERF1AO75920 110 aa8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 C9orf163Q8N9P6 203 aa8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 HSPB8Q9UJY1 196 aa8.02□□□□□ -1.13
PDGFRA-204ENST00000504461 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-204ENST00000504461 hDV102S1A0JD36 115 aa8.01□□□□□ -1.13
PDGFRA-204ENST00000504461 F8WDY8 70 aa8.01□□□□□ -1.13
PDGFRA-204ENST00000504461 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
PDGFRA-204ENST00000504461 A0A087WZ39 114 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 TINCRA0A1B0GVN0 87 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 KRTAP29-1A8MX34 341 aaPredicted RBP8□□□□□ -1.13
PDGFRA-204ENST00000504461 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 LEPROTL1O95214 131 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 PMCHL1Q16048 86 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 COA6Q5JTJ3 125 aaKnown RBP8□□□□□ -1.13
PDGFRA-204ENST00000504461 LINC00173Q6ZV60 143 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 IFI27L1Q96BM0 104 aa8□□□□□ -1.13
PDGFRA-204ENST00000504461 PACRGQ96M98 296 aaPredicted RBP8□□□□□ -1.13
PDGFRA-204ENST00000504461 GVQW2A0A096LPI5 108 aaPredicted RBP7.99□□□□□ -1.13
PDGFRA-204ENST00000504461 TRAV12-1A0A0B4J245 112 aa7.99□□□□□ -1.13
PDGFRA-204ENST00000504461 NDUFA6P56556 154 aa7.99□□□□□ -1.13
PDGFRA-204ENST00000504461 CNBPP62633 177 aaKnown RBP7.99□□□□□ -1.13
PDGFRA-204ENST00000504461 OR10D4PQ8NGN7 298 aa7.99□□□□□ -1.13
PDGFRA-204ENST00000504461 DPH3Q96FX2 82 aa7.99□□□□□ -1.13
PDGFRA-204ENST00000504461 H3BRM9 83 aa7.98□□□□□ -1.13
PDGFRA-204ENST00000504461 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
PDGFRA-204ENST00000504461 C5orf38Q86SI9 138 aa7.98□□□□□ -1.13
PDGFRA-204ENST00000504461 FAM19A2Q8N3H0 131 aa7.98□□□□□ -1.13
PDGFRA-204ENST00000504461 PKIGQ9Y2B9 76 aa7.98□□□□□ -1.13
PDGFRA-204ENST00000504461 IGHV3-64A0A075B6Q5 118 aa7.97□□□□□ -1.13
PDGFRA-204ENST00000504461 SDIM1Q6ZPB5 146 aa7.97□□□□□ -1.13
PDGFRA-204ENST00000504461 C2orf48Q96LS8 159 aa7.97□□□□□ -1.13
PDGFRA-204ENST00000504461 KRTAP10-4P60372 401 aaPredicted RBP7.96□□□□□ -1.14
PDGFRA-204ENST00000504461 COX6A2Q02221 97 aa7.96□□□□□ -1.14
PDGFRA-204ENST00000504461 C15orf56Q8N910 161 aa7.96□□□□□ -1.14
PDGFRA-204ENST00000504461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.96□□□□□ -1.14
PDGFRA-204ENST00000504461 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 NUPR1O60356 82 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 IGLC3P0DOY3 106 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 LINC00310P59036 64 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 ZC2HC1BQ5TFG8 222 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 MAP1LC3CQ9BXW4 147 aa7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 CHTOPQ9Y3Y2 248 aaKnown RBP7.95□□□□□ -1.14
PDGFRA-204ENST00000504461 OXTP01178 125 aa7.94□□□□□ -1.14
PDGFRA-204ENST00000504461 LINC00469Q8N7U9 141 aa7.94□□□□□ -1.14
PDGFRA-204ENST00000504461 CDKN2A-AS1Q9UH64 79 aa7.94□□□□□ -1.14
PDGFRA-204ENST00000504461 MYCBP2O75592 4640 aa7.93□□□□□ -1.14
PDGFRA-204ENST00000504461 PANO1I0J062 215 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms