RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 ERASQ7Z444 233 aa5.07□□□□□ -1.6
SKP2-203ENST00000504386 LINC01561Q8N1V8 128 aa5.07□□□□□ -1.6
SKP2-203ENST00000504386 C15orf56Q8N910 161 aa5.07□□□□□ -1.6
SKP2-203ENST00000504386 TOMM6Q96B49 74 aa5.07□□□□□ -1.6
SKP2-203ENST00000504386 CHAC1Q9BUX1 264 aa5.07□□□□□ -1.6
SKP2-203ENST00000504386 EPPK1P58107 5090 aaKnown RBP5.07□□□□□ -1.6
SKP2-203ENST00000504386 IGLV4-3A0A075B6K6 122 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 LINC01546A6NGU7 62 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 FUSP35637 526 aaKnown RBP eCLIP5.06□□□□□ -1.6
SKP2-203ENST00000504386 XGP55808 180 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 HERVK_113P63121 156 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 DPH3Q96FX2 82 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 C2orf48Q96LS8 159 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 CARD19Q96LW7 228 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 SCGB3A1Q96QR1 104 aa5.06□□□□□ -1.6
SKP2-203ENST00000504386 IGLV4-69A0A075B6H9 119 aa5.05□□□□□ -1.6
SKP2-203ENST00000504386 IGIPA6NJ69 53 aa5.05□□□□□ -1.6
SKP2-203ENST00000504386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.05□□□□□ -1.6
SKP2-203ENST00000504386 SYCNQ0VAF6 134 aa5.05□□□□□ -1.6
SKP2-203ENST00000504386 HIGD2BQ4VC39 106 aa5.05□□□□□ -1.6
SKP2-203ENST00000504386 RNASE13Q5GAN3 156 aaKnown RBP5.05□□□□□ -1.6
SKP2-203ENST00000504386 CAMK2N2Q96S95 79 aa5.05□□□□□ -1.6
SKP2-203ENST00000504386 AMELXQ99217 191 aa5.05□□□□□ -1.6
SKP2-203ENST00000504386 GEMIN7Q9H840 131 aaKnown RBP5.05□□□□□ -1.6
SKP2-203ENST00000504386 A0A087WZ39 114 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 IGHV3OR16-9A0A0B4J2B5 98 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 NDUFA1O15239 70 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 ATP5LO75964 103 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 PRSS2P07478 247 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 LINC00614P0C842 121 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 SPAG11BQ08648 103 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 RNF151Q2KHN1 245 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 SDIM1Q6ZPB5 146 aa5.04□□□□□ -1.6
SKP2-203ENST00000504386 PACRGQ96M98 296 aaPredicted RBP5.04□□□□□ -1.6
SKP2-203ENST00000504386 LOC107984640A0A0U1RRK4 108 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 HBDP02042 147 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 UBE2D1P51668 147 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 CIRBPQ14011 172 aaKnown RBP5.03□□□□□ -1.6
SKP2-203ENST00000504386 LINC00242Q5T6M2 205 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 SCXQ7RTU7 201 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 FAM19A3Q7Z5A8 133 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 C5orf38Q86SI9 138 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 C18orf32Q8TCD1 76 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 ORAOV1Q8WV07 137 aa5.03□□□□□ -1.6
SKP2-203ENST00000504386 CHCHD1Q96BP2 118 aaKnown RBP5.03□□□□□ -1.6
SKP2-203ENST00000504386 OPRPNQ99935 248 aaPredicted RBP5.03□□□□□ -1.6
SKP2-203ENST00000504386 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 H3BRM9 83 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 CXCL5P42830 114 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 PMVKQ15126 192 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 LINC01620Q4KN68 170 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 Q5VSD8 79 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 CIRBP-AS1Q8TBR5 109 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 C7orf33Q8WU49 177 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 MRPL35Q9NZE8 188 aaKnown RBP5.02□□□□□ -1.61
SKP2-203ENST00000504386 FAM30AQ9NZY2 134 aa5.02□□□□□ -1.61
SKP2-203ENST00000504386 TRBV30A0A0K0K1B3 111 aa5.01□□□□□ -1.61
SKP2-203ENST00000504386 TINCRA0A1B0GVN0 87 aa5.01□□□□□ -1.61
SKP2-203ENST00000504386 CKS1BP61024 79 aa5.01□□□□□ -1.61
SKP2-203ENST00000504386 COX6A2Q02221 97 aa5.01□□□□□ -1.61
SKP2-203ENST00000504386 SPACA4Q8TDM5 124 aa5.01□□□□□ -1.61
SKP2-203ENST00000504386 FAM104AQ969W3 186 aa5.01□□□□□ -1.61
SKP2-203ENST00000504386 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
SKP2-203ENST00000504386 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
SKP2-203ENST00000504386 SLPIP03973 132 aa5□□□□□ -1.61
SKP2-203ENST00000504386 MAJINQ3KP22 176 aa5□□□□□ -1.61
SKP2-203ENST00000504386 SFTA2Q6UW10 78 aa5□□□□□ -1.61
SKP2-203ENST00000504386 BAGE3Q86Y29 109 aa5□□□□□ -1.61
SKP2-203ENST00000504386 CBLN2Q8IUK8 224 aa5□□□□□ -1.61
SKP2-203ENST00000504386 Q8IZM0 81 aa5□□□□□ -1.61
SKP2-203ENST00000504386 SLC7A5P1Q8MH63 180 aa5□□□□□ -1.61
SKP2-203ENST00000504386 LINC00469Q8N7U9 141 aa5□□□□□ -1.61
SKP2-203ENST00000504386 YPEL4Q96NS1 127 aa5□□□□□ -1.61
SKP2-203ENST00000504386 PLAC8Q9NZF1 115 aa5□□□□□ -1.61
SKP2-203ENST00000504386 IGKV2-24A0A0C4DH68 120 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 HSBP1O75506 76 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 SMR3BP02814 79 aaPredicted RBP4.99□□□□□ -1.61
SKP2-203ENST00000504386 PDZD11Q5EBL8 140 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 C6orf226Q5I0X4 101 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 Q6ZRU5 148 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 LINC00173Q6ZV60 143 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 CST9LQ9H4G1 147 aa4.99□□□□□ -1.61
SKP2-203ENST00000504386 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 A0A087WYN8 130 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 TLX1NBP0CAT3 122 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 INAFM2P0DMQ5 153 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 PTTG1IPP53801 180 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 NDUFA6P56556 154 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 RPL37AP61513 92 aaKnown RBP4.98□□□□□ -1.61
SKP2-203ENST00000504386 RPL18AQ02543 176 aaKnown RBP4.98□□□□□ -1.61
SKP2-203ENST00000504386 TOMM7Q9P0U1 55 aa4.98□□□□□ -1.61
SKP2-203ENST00000504386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
SKP2-203ENST00000504386 FRAS1Q86XX4 4008 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 DNAH17Q9UFH2 4485 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 A0A0J9YXV3 536 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 F8VRH5 84 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 HAMPP81172 84 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 GAGE2BQ13066 116 aa4.97□□□□□ -1.61
SKP2-203ENST00000504386 STPG4Q8N801 248 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms