RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 LINC00242Q5T6M2 205 aa8.72□□□□□ -1.01
PDLIM7-212ENST00000504380 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
PDLIM7-212ENST00000504380 SPATA12Q7Z6I5 190 aa8.72□□□□□ -1.01
PDLIM7-212ENST00000504380 CST9LQ9H4G1 147 aa8.72□□□□□ -1.01
PDLIM7-212ENST00000504380 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 A0A0J9YXV3 536 aa8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 EREGO14944 169 aa8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 ATP5LO75964 103 aa8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 PMVKQ15126 192 aa8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 Q8N814 137 aa8.71□□□□□ -1.02
PDLIM7-212ENST00000504380 PRSS1P07477 247 aa8.7□□□□□ -1.02
PDLIM7-212ENST00000504380 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
PDLIM7-212ENST00000504380 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
PDLIM7-212ENST00000504380 IFI27L1Q96BM0 104 aa8.7□□□□□ -1.02
PDLIM7-212ENST00000504380 COX7A2LO14548 114 aa8.69□□□□□ -1.02
PDLIM7-212ENST00000504380 LEPROTL1O95214 131 aa8.69□□□□□ -1.02
PDLIM7-212ENST00000504380 LINC00526Q96FQ7 95 aa8.69□□□□□ -1.02
PDLIM7-212ENST00000504380 DNAH11Q96DT5 4516 aa8.69□□□□□ -1.02
PDLIM7-212ENST00000504380 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
PDLIM7-212ENST00000504380 H0Y8G0 127 aa8.68□□□□□ -1.02
PDLIM7-212ENST00000504380 MALP21145 153 aa8.68□□□□□ -1.02
PDLIM7-212ENST00000504380 COA6Q5JTJ3 125 aaKnown RBP8.68□□□□□ -1.02
PDLIM7-212ENST00000504380 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
PDLIM7-212ENST00000504380 NTN5Q8WTR8 489 aaPredicted RBP8.67□□□□□ -1.02
PDLIM7-212ENST00000504380 ABCA13Q86UQ4 5058 aa8.67□□□□□ -1.02
PDLIM7-212ENST00000504380 PKD1P98161 4303 aa8.67□□□□□ -1.02
PDLIM7-212ENST00000504380 IGHV1-58A0A0C4DH39 117 aa8.66□□□□□ -1.02
PDLIM7-212ENST00000504380 CFAP161Q6P656 301 aa8.66□□□□□ -1.02
PDLIM7-212ENST00000504380 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
PDLIM7-212ENST00000504380 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
PDLIM7-212ENST00000504380 IGLV4-69A0A075B6H9 119 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 IGLV5-52A0A0A0MRZ9 124 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 TINCRA0A1B0GVN0 87 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 SLPIP03973 132 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 LINC01620Q4KN68 170 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 C14orf177Q52M58 125 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 HSPB8Q9UJY1 196 aa8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.02
PDLIM7-212ENST00000504380 PKHD1P08F94 4074 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 A0A087WZ39 114 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 IGLC3P0DOY3 106 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 HERVK_113P63121 156 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 LINC00469Q8N7U9 141 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 ORAOV1Q8WV07 137 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
PDLIM7-212ENST00000504380 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 GVQW2A0A096LPI5 108 aaPredicted RBP8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 TRAV12-1A0A0B4J245 112 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 C11orf86A6NJI1 115 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 SEC11AP67812 179 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 CHAC1Q9BUX1 264 aa8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
PDLIM7-212ENST00000504380 APOMO95445 188 aa8.62□□□□□ -1.03
PDLIM7-212ENST00000504380 SPINK8P0C7L1 97 aa8.62□□□□□ -1.03
PDLIM7-212ENST00000504380 SPAG11BQ08648 103 aa8.62□□□□□ -1.03
PDLIM7-212ENST00000504380 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 S100A6P06703 90 aa8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 ODF1Q14990 250 aa8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
PDLIM7-212ENST00000504380 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
PDLIM7-212ENST00000504380 KRTAP10-1P60331 282 aa8.6□□□□□ -1.03
PDLIM7-212ENST00000504380 TOMM7Q9P0U1 55 aa8.6□□□□□ -1.03
PDLIM7-212ENST00000504380 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 F8VRH5 84 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 SYS1-DBNDD2H3BUS1 97 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 GCSHP23434 173 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 TMEM170BQ5T4T1 132 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 LINC01561Q8N1V8 128 aa8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 PACRGQ96M98 296 aaPredicted RBP8.59□□□□□ -1.03
PDLIM7-212ENST00000504380 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 KRTDAPP60985 99 aa8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 CNBPP62633 177 aaKnown RBP8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 CDPF1Q6NVV7 123 aa8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 Q6ZRU5 148 aa8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 OR10D4PQ8NGN7 298 aa8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 TMA7Q9Y2S6 64 aaKnown RBP8.58□□□□□ -1.04
PDLIM7-212ENST00000504380 H3BRM9 83 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 S100A2P29034 98 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 C10orf25Q5T742 122 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 C2orf82Q6UX34 121 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 UNQ6190/PRO20217Q6UXQ8 127 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 CAMK2N2Q96S95 79 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
PDLIM7-212ENST00000504380 C5orf52A6NGY3 159 aa8.56□□□□□ -1.04
PDLIM7-212ENST00000504380 PRSS2P07478 247 aa8.56□□□□□ -1.04
PDLIM7-212ENST00000504380 C9orf163Q8N9P6 203 aa8.56□□□□□ -1.04
PDLIM7-212ENST00000504380 CARD19Q96LW7 228 aa8.56□□□□□ -1.04
PDLIM7-212ENST00000504380 DNAH5Q8TE73 4624 aa8.56□□□□□ -1.04
PDLIM7-212ENST00000504380 DPM2O94777 84 aa8.55□□□□□ -1.04
PDLIM7-212ENST00000504380 C6orf226Q5I0X4 101 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms