RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 TMEM89A2RUT3 159 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 NCR3O14931 201 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 MYO18BQ8IUG5 2567 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 FLNCQ14315 2725 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 CCKP06307 115 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 XCL1P47992 114 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 SMIM11BQ8TCY0 68 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
POLR2J3-209ENST00000504157 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
POLR2J3-209ENST00000504157 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
POLR2J3-209ENST00000504157 IGHV4-38-2P0DP08 117 aa12.73□□□□□ -0.37
POLR2J3-209ENST00000504157 C20orf197Q8N268 126 aa12.73□□□□□ -0.37
POLR2J3-209ENST00000504157 DGAT2L7PQ6IED9 249 aa12.73□□□□□ -0.37
POLR2J3-209ENST00000504157 SVEP1Q4LDE5 3571 aa12.72□□□□□ -0.37
POLR2J3-209ENST00000504157 KNCNA6PVL3 124 aa12.72□□□□□ -0.37
POLR2J3-209ENST00000504157 LYPD5Q6UWN5 251 aa12.72□□□□□ -0.37
POLR2J3-209ENST00000504157 TRAV23DV6A0A075B6W5 121 aa12.71□□□□□ -0.37
POLR2J3-209ENST00000504157 H7BZZ5 65 aa12.71□□□□□ -0.37
POLR2J3-209ENST00000504157 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
POLR2J3-209ENST00000504157 C1orf43Q9BWL3 253 aa12.7□□□□□ -0.38
POLR2J3-209ENST00000504157 IGHV3-38A0A0C4DH36 116 aa12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 LECT2O14960 151 aa12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 C16orf95Q9H693 158 aa12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 SS18Q15532 418 aa12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 USP9XQ93008 2570 aaPredicted RBP12.69□□□□□ -0.38
POLR2J3-209ENST00000504157 BCE1O60756 84 aa12.68□□□□□ -0.38
POLR2J3-209ENST00000504157 UBR5O95071 2799 aaPredicted RBP12.68□□□□□ -0.38
POLR2J3-209ENST00000504157 FAM19A1Q7Z5A9 133 aa12.68□□□□□ -0.38
POLR2J3-209ENST00000504157 MIR7-3HGQ8N6C7 128 aa12.68□□□□□ -0.38
POLR2J3-209ENST00000504157 HTN1P15515 57 aa12.67□□□□□ -0.38
POLR2J3-209ENST00000504157 C11orf72Q8NBR9 251 aa12.67□□□□□ -0.38
POLR2J3-209ENST00000504157 DOPEY2Q9Y3R5 2298 aa12.67□□□□□ -0.38
POLR2J3-209ENST00000504157 TMEM86BQ8N661 226 aa12.66□□□□□ -0.38
POLR2J3-209ENST00000504157 WFDC9Q8NEX5 89 aa12.66□□□□□ -0.38
POLR2J3-209ENST00000504157 SMIM26A0A096LP01 95 aa12.66□□□□□ -0.38
POLR2J3-209ENST00000504157 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
POLR2J3-209ENST00000504157 ENHOQ6UWT2 76 aa12.65□□□□□ -0.38
POLR2J3-209ENST00000504157 ORMDL1Q9P0S3 153 aa12.65□□□□□ -0.38
POLR2J3-209ENST00000504157 SPTAN1Q13813 2472 aaKnown RBP12.65□□□□□ -0.38
POLR2J3-209ENST00000504157 C19orf84I3L1E1 186 aa12.65□□□□□ -0.38
POLR2J3-209ENST00000504157 TRAV7A0A075B6U4 112 aa12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 IGHV4-61A0A0C4DH41 118 aa12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 PLA2G2AP14555 144 aa12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 DOPEY1Q5JWR5 2465 aa12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 FP248Q71RG6 208 aaPredicted RBP12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
POLR2J3-209ENST00000504157 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
POLR2J3-209ENST00000504157 SLPIP03973 132 aa12.63□□□□□ -0.39
POLR2J3-209ENST00000504157 KLKP1Q107X0 134 aa12.63□□□□□ -0.39
POLR2J3-209ENST00000504157 JMJD7-PLA2G4BH0Y9G9 81 aa12.62□□□□□ -0.39
POLR2J3-209ENST00000504157 J3QKU1 62 aa12.62□□□□□ -0.39
POLR2J3-209ENST00000504157 ZFHX3Q15911 3703 aa12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 DEFB131AP59861 70 aa12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 Q96MF0 132 aa12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 LRRK2Q5S007 2527 aa12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 PRM2P04554 102 aa12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 LINC00167Q96N53 147 aa12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 UTP20O75691 2785 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-209ENST00000504157 C10orf99Q6UWK7 81 aa12.6□□□□□ -0.39
POLR2J3-209ENST00000504157 CDC42SE2Q9NRR3 84 aa12.6□□□□□ -0.39
POLR2J3-209ENST00000504157 PKIGQ9Y2B9 76 aa12.6□□□□□ -0.39
POLR2J3-209ENST00000504157 CCL18P55774 89 aa12.6□□□□□ -0.39
POLR2J3-209ENST00000504157 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
POLR2J3-209ENST00000504157 TENM4Q6N022 2769 aa12.59□□□□□ -0.39
POLR2J3-209ENST00000504157 AVPP01185 164 aa12.58□□□□□ -0.39
POLR2J3-209ENST00000504157 UBL5Q9BZL1 73 aa12.58□□□□□ -0.4
POLR2J3-209ENST00000504157 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
POLR2J3-209ENST00000504157 HELZ2Q9BYK8 2649 aaKnown RBP12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 LY6G6DO95868 133 aa12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 INSP01308 110 aa12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 MSMBP08118 114 aa12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 UBE2E2Q96LR5 201 aa12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 LINC00158P58513 81 aa12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 NTM-AS1Q6ZSK4 140 aa12.56□□□□□ -0.4
POLR2J3-209ENST00000504157 WFDC11Q8NEX6 87 aa12.55□□□□□ -0.4
POLR2J3-209ENST00000504157 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
POLR2J3-209ENST00000504157 K7EQD1 137 aa12.53□□□□□ -0.4
POLR2J3-209ENST00000504157 TMEM256-PLSCR3K7ERE1 68 aa12.53□□□□□ -0.4
POLR2J3-209ENST00000504157 CRYBG3Q68DQ2 2970 aa12.53□□□□□ -0.4
POLR2J3-209ENST00000504157 IBA57-AS1B1ANH7 110 aa12.52□□□□□ -0.41
POLR2J3-209ENST00000504157 IGHV4-59P01825 116 aa12.52□□□□□ -0.41
POLR2J3-209ENST00000504157 TRBV6-4A0A1B0GX49 114 aa12.52□□□□□ -0.41
POLR2J3-209ENST00000504157 SORL1Q92673 2214 aa12.51□□□□□ -0.41
POLR2J3-209ENST00000504157 LINC00482Q8N8I6 264 aa12.51□□□□□ -0.41
POLR2J3-209ENST00000504157 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
POLR2J3-209ENST00000504157 USP9YO00507 2555 aaPredicted RBP12.51□□□□□ -0.41
POLR2J3-209ENST00000504157 F8WEM9 126 aa12.5□□□□□ -0.41
POLR2J3-209ENST00000504157 PAX4O43316 350 aa12.5□□□□□ -0.41
POLR2J3-209ENST00000504157 RMI2Q96E14 147 aa12.5□□□□□ -0.41
POLR2J3-209ENST00000504157 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
POLR2J3-209ENST00000504157 NDUFC1O43677 76 aa12.5□□□□□ -0.41
POLR2J3-209ENST00000504157 GCN1Q92616 2671 aaKnown RBP12.49□□□□□ -0.41
POLR2J3-209ENST00000504157 ATP5EP56381 51 aaPredicted RBP12.49□□□□□ -0.41
POLR2J3-209ENST00000504157 Q8N814 137 aa12.49□□□□□ -0.41
POLR2J3-209ENST00000504157 SNURFQ9Y675 71 aa12.49□□□□□ -0.41
POLR2J3-209ENST00000504157 SEC61GP60059 68 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms