RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 NPYP01303 97 aa7.49□□□□□ -1.21
MED28-203ENST00000503945 MT-ND4LP03901 98 aa7.49□□□□□ -1.21
MED28-203ENST00000503945 Q6ZUT4 128 aa7.49□□□□□ -1.21
MED28-203ENST00000503945 PRELID3AQ96N28 172 aa7.49□□□□□ -1.21
MED28-203ENST00000503945 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
MED28-203ENST00000503945 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
MED28-203ENST00000503945 MRPS36P82909 103 aaKnown RBP7.48□□□□□ -1.21
MED28-203ENST00000503945 PNRC1Q12796 327 aaPredicted RBP7.48□□□□□ -1.21
MED28-203ENST00000503945 Q6ZRP5 223 aa7.48□□□□□ -1.21
MED28-203ENST00000503945 ANAPC16Q96DE5 110 aa7.48□□□□□ -1.21
MED28-203ENST00000503945 OPRPNQ99935 248 aaPredicted RBP7.48□□□□□ -1.21
MED28-203ENST00000503945 F8WDY8 70 aa7.47□□□□□ -1.21
MED28-203ENST00000503945 IFI27P40305 119 aaPredicted RBP7.47□□□□□ -1.21
MED28-203ENST00000503945 PRR3P79522 188 aaKnown RBP7.47□□□□□ -1.21
MED28-203ENST00000503945 RNF151Q2KHN1 245 aa7.47□□□□□ -1.21
MED28-203ENST00000503945 OR10D4PQ8NGN7 298 aa7.47□□□□□ -1.21
MED28-203ENST00000503945 IGHV3OR16-9A0A0B4J2B5 98 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 LOC389332A0A1B0GUA5 103 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 SPINK6Q6UWN8 80 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 IMMP2LQ96T52 175 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 PYGO1Q9Y3Y4 419 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 TNXBP22105 4242 aa7.46□□□□□ -1.22
MED28-203ENST00000503945 IFITM10A6NMD0 228 aa7.45□□□□□ -1.22
MED28-203ENST00000503945 SPAG11BQ08648 103 aa7.45□□□□□ -1.22
MED28-203ENST00000503945 ORAOV1Q8WV07 137 aa7.45□□□□□ -1.22
MED28-203ENST00000503945 MAP1LC3AQ9H492 121 aa7.45□□□□□ -1.22
MED28-203ENST00000503945 TGIF2-C20orf24A0A0A6YYL0 155 aa7.44□□□□□ -1.22
MED28-203ENST00000503945 A0A1W2PNN7 141 aa7.44□□□□□ -1.22
MED28-203ENST00000503945 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
MED28-203ENST00000503945 RPL18AQ02543 176 aaKnown RBP7.44□□□□□ -1.22
MED28-203ENST00000503945 REG3GQ6UW15 175 aa7.44□□□□□ -1.22
MED28-203ENST00000503945 LINC01600Q96MT4 127 aa7.44□□□□□ -1.22
MED28-203ENST00000503945 MRPL35Q9NZE8 188 aaKnown RBP7.44□□□□□ -1.22
MED28-203ENST00000503945 A0A0J9YXV3 536 aa7.43□□□□□ -1.22
MED28-203ENST00000503945 NDUFA1O15239 70 aa7.43□□□□□ -1.22
MED28-203ENST00000503945 SRSF9Q13242 221 aaKnown RBP eCLIP7.43□□□□□ -1.22
MED28-203ENST00000503945 C9orf116Q5BN46 136 aaPredicted RBP7.43□□□□□ -1.22
MED28-203ENST00000503945 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
MED28-203ENST00000503945 LRP2P98164 4655 aa7.43□□□□□ -1.22
MED28-203ENST00000503945 G0S2P27469 103 aa7.42□□□□□ -1.22
MED28-203ENST00000503945 ODF1Q14990 250 aa7.42□□□□□ -1.22
MED28-203ENST00000503945 TEX43Q6ZNM6 134 aa7.42□□□□□ -1.22
MED28-203ENST00000503945 Q8N8P6 123 aa7.42□□□□□ -1.22
MED28-203ENST00000503945 CTDSP1Q9GZU7 261 aa7.42□□□□□ -1.22
MED28-203ENST00000503945 VCX2Q9H322 139 aa7.42□□□□□ -1.22
MED28-203ENST00000503945 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 A0A087WZ39 114 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 K7EMI3 77 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 SMCPP49901 116 aaPredicted RBP7.41□□□□□ -1.22
MED28-203ENST00000503945 ORMDL2Q53FV1 153 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 UNQ6190/PRO20217Q6UXQ8 127 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 Q6ZN92 141 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 C2orf88Q9BSF0 95 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 CYSLTR1Q9Y271 337 aa7.41□□□□□ -1.22
MED28-203ENST00000503945 MT-ND6P03923 174 aa7.4□□□□□ -1.22
MED28-203ENST00000503945 C2orf66Q6UXQ4 117 aa7.4□□□□□ -1.22
MED28-203ENST00000503945 CLLU1Q5K131 121 aa7.39□□□□□ -1.23
MED28-203ENST00000503945 C10orf25Q5T742 122 aa7.39□□□□□ -1.23
MED28-203ENST00000503945 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
MED28-203ENST00000503945 NPSP0C0P6 89 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 TLX1NBP0CAT3 122 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 UBE2D1P51668 147 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 GAGE2EQ4V326 116 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 C1orf137Q5JT78 98 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 PAPPA-AS1Q5QFB9 102 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
MED28-203ENST00000503945 LINC01561Q8N1V8 128 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 PACRGQ96M98 296 aaPredicted RBP7.38□□□□□ -1.23
MED28-203ENST00000503945 GAGE2DQ9UEU5 116 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 PSORS1C2Q9UIG4 136 aa7.38□□□□□ -1.23
MED28-203ENST00000503945 TRBV30A0A0K0K1B3 111 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 IGIPA6NJ69 53 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 PRSS2P07478 247 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 KRTAP10-8P60410 259 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 KIAA0087Q14695 138 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 C6orf226Q5I0X4 101 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 UQCC3Q6UW78 93 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 AMELXQ99217 191 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 C6orf48Q9UBA6 75 aa7.37□□□□□ -1.23
MED28-203ENST00000503945 TMEM218A2RU14 115 aa7.36□□□□□ -1.23
MED28-203ENST00000503945 CKS1BP61024 79 aa7.36□□□□□ -1.23
MED28-203ENST00000503945 SEC11AP67812 179 aa7.36□□□□□ -1.23
MED28-203ENST00000503945 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
MED28-203ENST00000503945 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
MED28-203ENST00000503945 C2orf82Q6UX34 121 aa7.35□□□□□ -1.23
MED28-203ENST00000503945 TRAV9-1A0A075B6T8 112 aa7.34□□□□□ -1.23
MED28-203ENST00000503945 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
MED28-203ENST00000503945 NDUFC2-KCTD14E9PQ53 114 aa7.34□□□□□ -1.23
MED28-203ENST00000503945 S100PP25815 95 aa7.34□□□□□ -1.23
MED28-203ENST00000503945 HERVK_113P63121 156 aa7.34□□□□□ -1.23
MED28-203ENST00000503945 GEMIN7Q9H840 131 aaKnown RBP7.34□□□□□ -1.23
MED28-203ENST00000503945 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
MED28-203ENST00000503945 LINC00173Q6ZV60 143 aa7.33□□□□□ -1.24
MED28-203ENST00000503945 FAM19A5Q7Z5A7 132 aaPredicted RBP7.33□□□□□ -1.24
MED28-203ENST00000503945 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
MED28-203ENST00000503945 TOMM6Q96B49 74 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms