RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 G0S2P27469 103 aa13.23□□□□□ -0.29
PDGFRA-203ENST00000503856 ZC2HC1BQ5TFG8 222 aa13.23□□□□□ -0.29
PDGFRA-203ENST00000503856 TEX43Q6ZNM6 134 aa13.23□□□□□ -0.29
PDGFRA-203ENST00000503856 LINC01546A6NGU7 62 aa13.22□□□□□ -0.29
PDGFRA-203ENST00000503856 FAM229AH3BQW9 127 aa13.22□□□□□ -0.29
PDGFRA-203ENST00000503856 LINC00173Q6ZV60 143 aa13.22□□□□□ -0.29
PDGFRA-203ENST00000503856 TOMM6Q96B49 74 aa13.22□□□□□ -0.29
PDGFRA-203ENST00000503856 YPEL4Q96NS1 127 aa13.22□□□□□ -0.29
PDGFRA-203ENST00000503856 NPSP0C0P6 89 aa13.21□□□□□ -0.29
PDGFRA-203ENST00000503856 LINC00242Q5T6M2 205 aa13.21□□□□□ -0.29
PDGFRA-203ENST00000503856 Q6ZN92 141 aa13.21□□□□□ -0.29
PDGFRA-203ENST00000503856 AMELXQ99217 191 aa13.21□□□□□ -0.29
PDGFRA-203ENST00000503856 VCX2Q9H322 139 aa13.21□□□□□ -0.29
PDGFRA-203ENST00000503856 FAT1Q14517 4588 aa13.21□□□□□ -0.29
PDGFRA-203ENST00000503856 IGLV4-69A0A075B6H9 119 aa13.2□□□□□ -0.3
PDGFRA-203ENST00000503856 APOMO95445 188 aa13.2□□□□□ -0.3
PDGFRA-203ENST00000503856 COX6A2Q02221 97 aa13.2□□□□□ -0.3
PDGFRA-203ENST00000503856 FA2HQ7L5A8 372 aa13.2□□□□□ -0.3
PDGFRA-203ENST00000503856 C2orf88Q9BSF0 95 aa13.2□□□□□ -0.3
PDGFRA-203ENST00000503856 CHTF8P0CG12 524 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 UBE2D1P51668 147 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 SYCNQ0VAF6 134 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 LINC00528Q8N1L1 170 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 TIMM17AQ99595 171 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 SMCO4Q9NRQ5 59 aa13.19□□□□□ -0.3
PDGFRA-203ENST00000503856 CIRBPQ14011 172 aaKnown RBP13.18□□□□□ -0.3
PDGFRA-203ENST00000503856 ERASQ7Z444 233 aa13.18□□□□□ -0.3
PDGFRA-203ENST00000503856 C18orf32Q8TCD1 76 aa13.18□□□□□ -0.3
PDGFRA-203ENST00000503856 CARD19Q96LW7 228 aa13.18□□□□□ -0.3
PDGFRA-203ENST00000503856 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
PDGFRA-203ENST00000503856 SPAG11BQ08648 103 aa13.16□□□□□ -0.3
PDGFRA-203ENST00000503856 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
PDGFRA-203ENST00000503856 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
PDGFRA-203ENST00000503856 DPH3Q96FX2 82 aa13.16□□□□□ -0.3
PDGFRA-203ENST00000503856 URB1-AS1Q96HZ7 61 aa13.16□□□□□ -0.3
PDGFRA-203ENST00000503856 A0A087WZ39 114 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 Q6ZRU5 148 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 OR10D4PQ8NGN7 298 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 C2orf48Q96LS8 159 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 CAMK2N2Q96S95 79 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 ABCA13Q86UQ4 5058 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 PCLOQ9Y6V0 5065 aa13.15□□□□□ -0.3
PDGFRA-203ENST00000503856 LINC01549A6NIU2 74 aa13.14□□□□□ -0.31
PDGFRA-203ENST00000503856 SPACA4Q8TDM5 124 aa13.14□□□□□ -0.31
PDGFRA-203ENST00000503856 SRRM2Q9UQ35 2752 aaKnown RBP13.14□□□□□ -0.31
PDGFRA-203ENST00000503856 IGKV2-24A0A0C4DH68 120 aa13.13□□□□□ -0.31
PDGFRA-203ENST00000503856 LINC00614P0C842 121 aa13.13□□□□□ -0.31
PDGFRA-203ENST00000503856 A0A087WYN8 130 aa13.12□□□□□ -0.31
PDGFRA-203ENST00000503856 A0A096LNI7 61 aa13.12□□□□□ -0.31
PDGFRA-203ENST00000503856 INAFM2P0DMQ5 153 aa13.12□□□□□ -0.31
PDGFRA-203ENST00000503856 FAM19A3Q7Z5A8 133 aa13.12□□□□□ -0.31
PDGFRA-203ENST00000503856 PLA2G1BP04054 148 aaKnown RBP13.11□□□□□ -0.31
PDGFRA-203ENST00000503856 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
PDGFRA-203ENST00000503856 FLG2Q5D862 2391 aaPredicted RBP13.11□□□□□ -0.31
PDGFRA-203ENST00000503856 A0A096LNJ9 63 aa13.1□□□□□ -0.31
PDGFRA-203ENST00000503856 A0A0J9YXV3 536 aa13.09□□□□□ -0.31
PDGFRA-203ENST00000503856 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
PDGFRA-203ENST00000503856 RAB5BP61020 215 aa13.08□□□□□ -0.32
PDGFRA-203ENST00000503856 SEC11AP67812 179 aa13.08□□□□□ -0.32
PDGFRA-203ENST00000503856 KIAA0087Q14695 138 aa13.08□□□□□ -0.32
PDGFRA-203ENST00000503856 LINC01561Q8N1V8 128 aa13.08□□□□□ -0.32
PDGFRA-203ENST00000503856 LOC107984640A0A0U1RRK4 108 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 F8WDY8 70 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 HERVK_113P63121 156 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 PMCHL1Q16048 86 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 CST9LQ9H4G1 147 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 PLAC8Q9NZF1 115 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
PDGFRA-203ENST00000503856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
PDGFRA-203ENST00000503856 NDUFA1O15239 70 aa13.06□□□□□ -0.32
PDGFRA-203ENST00000503856 HBDP02042 147 aa13.06□□□□□ -0.32
PDGFRA-203ENST00000503856 RNF151Q2KHN1 245 aa13.06□□□□□ -0.32
PDGFRA-203ENST00000503856 C10orf25Q5T742 122 aa13.06□□□□□ -0.32
PDGFRA-203ENST00000503856 UNQ6190/PRO20217Q6UXQ8 127 aa13.06□□□□□ -0.32
PDGFRA-203ENST00000503856 VPS13BQ7Z7G8 4022 aa13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 KRTAP10-4P60372 401 aaPredicted RBP13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 GAGE2BQ13066 116 aa13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 PMVKQ15126 192 aa13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 STPG4Q8N801 248 aa13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 MRPL35Q9NZE8 188 aaKnown RBP13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 LINC00474Q9P2X8 69 aa13.05□□□□□ -0.32
PDGFRA-203ENST00000503856 TRGC2P03986 189 aa13.04□□□□□ -0.32
PDGFRA-203ENST00000503856 PTTG1IPP53801 180 aa13.04□□□□□ -0.32
PDGFRA-203ENST00000503856 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
PDGFRA-203ENST00000503856 RPL37AP61513 92 aaKnown RBP13.02□□□□□ -0.33
PDGFRA-203ENST00000503856 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
PDGFRA-203ENST00000503856 C2orf82Q6UX34 121 aa13.02□□□□□ -0.33
PDGFRA-203ENST00000503856 LINC00469Q8N7U9 141 aa13.02□□□□□ -0.33
PDGFRA-203ENST00000503856 TOMM7Q9P0U1 55 aa13.02□□□□□ -0.33
PDGFRA-203ENST00000503856 C6orf48Q9UBA6 75 aa13.02□□□□□ -0.33
PDGFRA-203ENST00000503856 COLCA2A8K830 154 aa13.01□□□□□ -0.33
PDGFRA-203ENST00000503856 RPL18AQ02543 176 aaKnown RBP13.01□□□□□ -0.33
PDGFRA-203ENST00000503856 PACRGQ96M98 296 aaPredicted RBP13.01□□□□□ -0.33
PDGFRA-203ENST00000503856 PRSS2P07478 247 aa13□□□□□ -0.33
PDGFRA-203ENST00000503856 NDUFA6P56556 154 aa13□□□□□ -0.33
PDGFRA-203ENST00000503856 CHCHD1Q96BP2 118 aaKnown RBP13□□□□□ -0.33
PDGFRA-203ENST00000503856 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
PDGFRA-203ENST00000503856 ATP5LO75964 103 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms