RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
PDLIM7-210ENST00000503827 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
PDLIM7-210ENST00000503827 PPDPFQ9H3Y8 114 aa9.14□□□□□ -0.95
PDLIM7-210ENST00000503827 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
PDLIM7-210ENST00000503827 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
PDLIM7-210ENST00000503827 LBHQ53QV2 105 aaPredicted RBP9.13□□□□□ -0.95
PDLIM7-210ENST00000503827 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
PDLIM7-210ENST00000503827 KIR2DL4Q99706 377 aa9.12□□□□□ -0.95
PDLIM7-210ENST00000503827 C22orf24Q9Y442 160 aa9.12□□□□□ -0.95
PDLIM7-210ENST00000503827 BCE1O60756 84 aa9.11□□□□□ -0.95
PDLIM7-210ENST00000503827 CTAG1AP78358 180 aa9.11□□□□□ -0.95
PDLIM7-210ENST00000503827 BORCS7Q96B45 105 aa9.11□□□□□ -0.95
PDLIM7-210ENST00000503827 PACRGQ96M98 296 aaPredicted RBP9.11□□□□□ -0.95
PDLIM7-210ENST00000503827 KIAA0087Q14695 138 aa9.1□□□□□ -0.95
PDLIM7-210ENST00000503827 TEX46H3BTG2 121 aa9.09□□□□□ -0.95
PDLIM7-210ENST00000503827 K7EN84 100 aa9.09□□□□□ -0.95
PDLIM7-210ENST00000503827 RAB4AP20338 218 aa9.09□□□□□ -0.95
PDLIM7-210ENST00000503827 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
PDLIM7-210ENST00000503827 LINC00337Q8N6G1 96 aa9.09□□□□□ -0.95
PDLIM7-210ENST00000503827 TMEM191AQ9H0A3 160 aa9.09□□□□□ -0.95
PDLIM7-210ENST00000503827 TGIF2-C20orf24A0A0A6YYL0 155 aa9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 A8MWL6 223 aa9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 GATCO43716 136 aaKnown RBP9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 PPP1R17O96001 155 aa9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 FAM229BQ4G0N7 80 aa9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 C2orf82Q6UX34 121 aa9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 OCC1Q8TAD7 63 aa9.08□□□□□ -0.96
PDLIM7-210ENST00000503827 SUMO2P61956 95 aaKnown RBP9.07□□□□□ -0.96
PDLIM7-210ENST00000503827 ZNF345Q14585 488 aa9.07□□□□□ -0.96
PDLIM7-210ENST00000503827 LINC00242Q5T6M2 205 aa9.07□□□□□ -0.96
PDLIM7-210ENST00000503827 IGKV2D-26A0A0A0MRZ7 120 aa9.06□□□□□ -0.96
PDLIM7-210ENST00000503827 IFITM10A6NMD0 228 aa9.06□□□□□ -0.96
PDLIM7-210ENST00000503827 AMN1Q8IY45 258 aa9.06□□□□□ -0.96
PDLIM7-210ENST00000503827 ZNF727A8MUV8 499 aa9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 SMKR1H3BMG3 65 aa9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 HBBP68871 147 aa9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 MRPL55Q7Z7F7 128 aaKnown RBP9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 KRTAP4-1Q9BYQ7 146 aa9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 TP73-AS1Q9UF72 201 aa9.05□□□□□ -0.96
PDLIM7-210ENST00000503827 A0A1B0GUT8 65 aa9.04□□□□□ -0.96
PDLIM7-210ENST00000503827 KANTRA0A1W2PQU2 76 aa9.04□□□□□ -0.96
PDLIM7-210ENST00000503827 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
PDLIM7-210ENST00000503827 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
PDLIM7-210ENST00000503827 FAM104AQ969W3 186 aa9.04□□□□□ -0.96
PDLIM7-210ENST00000503827 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
PDLIM7-210ENST00000503827 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
PDLIM7-210ENST00000503827 NRACQ8N912 160 aa9.03□□□□□ -0.96
PDLIM7-210ENST00000503827 XAGE1AQ9HD64 81 aa9.03□□□□□ -0.96
PDLIM7-210ENST00000503827 SPANXA1Q9NS26 97 aa9.03□□□□□ -0.96
PDLIM7-210ENST00000503827 FAM231DQ6ZW35 169 aa9.02□□□□□ -0.97
PDLIM7-210ENST00000503827 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.97
PDLIM7-210ENST00000503827 SMLR1H3BR10 107 aa9.01□□□□□ -0.97
PDLIM7-210ENST00000503827 TCAPO15273 167 aa9.01□□□□□ -0.97
PDLIM7-210ENST00000503827 UBE2AP49459 152 aa9.01□□□□□ -0.97
PDLIM7-210ENST00000503827 CT83Q5H943 113 aa9.01□□□□□ -0.97
PDLIM7-210ENST00000503827 RPL37AP8A6NKH3 93 aa9□□□□□ -0.97
PDLIM7-210ENST00000503827 HIGD1CA8MV81 97 aa8.99□□□□□ -0.97
PDLIM7-210ENST00000503827 PRSS2P07478 247 aa8.99□□□□□ -0.97
PDLIM7-210ENST00000503827 CKS1BP61024 79 aa8.99□□□□□ -0.97
PDLIM7-210ENST00000503827 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
PDLIM7-210ENST00000503827 LINC00167Q96N53 147 aa8.99□□□□□ -0.97
PDLIM7-210ENST00000503827 TAGLN2P37802 199 aaKnown RBP8.98□□□□□ -0.97
PDLIM7-210ENST00000503827 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
PDLIM7-210ENST00000503827 HMSDA8MTL9 139 aa8.97□□□□□ -0.97
PDLIM7-210ENST00000503827 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
PDLIM7-210ENST00000503827 LINC01561Q8N1V8 128 aa8.97□□□□□ -0.97
PDLIM7-210ENST00000503827 C20orf78Q9BR46 151 aa8.97□□□□□ -0.97
PDLIM7-210ENST00000503827 CFC1BP0CG36 223 aa8.96□□□□□ -0.98
PDLIM7-210ENST00000503827 RIGQ13278 110 aa8.96□□□□□ -0.98
PDLIM7-210ENST00000503827 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
PDLIM7-210ENST00000503827 RPL32P62910 135 aaKnown RBP8.95□□□□□ -0.98
PDLIM7-210ENST00000503827 C6orf226Q5I0X4 101 aa8.95□□□□□ -0.98
PDLIM7-210ENST00000503827 GAGE10A6NGK3 116 aa8.94□□□□□ -0.98
PDLIM7-210ENST00000503827 IFI27P40305 119 aaPredicted RBP8.94□□□□□ -0.98
PDLIM7-210ENST00000503827 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
PDLIM7-210ENST00000503827 TRBV24-1A0A075B6N3 115 aa8.93□□□□□ -0.98
PDLIM7-210ENST00000503827 LINC00862A6NCI5 91 aa8.93□□□□□ -0.98
PDLIM7-210ENST00000503827 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
PDLIM7-210ENST00000503827 Q6ZN92 141 aa8.93□□□□□ -0.98
PDLIM7-210ENST00000503827 KRTAP9-7A8MTY7 169 aa8.92□□□□□ -0.98
PDLIM7-210ENST00000503827 Q8IZM0 81 aa8.92□□□□□ -0.98
PDLIM7-210ENST00000503827 C3orf22Q8N5N4 141 aa8.92□□□□□ -0.98
PDLIM7-210ENST00000503827 SMIM2Q9BVW6 85 aa8.92□□□□□ -0.98
PDLIM7-210ENST00000503827 CKS2P33552 79 aa8.91□□□□□ -0.98
PDLIM7-210ENST00000503827 PNRC1Q12796 327 aaPredicted RBP8.91□□□□□ -0.98
PDLIM7-210ENST00000503827 C4orf48Q5BLP8 95 aa8.91□□□□□ -0.98
PDLIM7-210ENST00000503827 FAM104BQ5XKR9 115 aa8.91□□□□□ -0.98
PDLIM7-210ENST00000503827 ALKBH7Q9BT30 221 aaPredicted RBP8.91□□□□□ -0.98
PDLIM7-210ENST00000503827 IGLV4-3A0A075B6K6 122 aa8.9□□□□□ -0.98
PDLIM7-210ENST00000503827 TNFRSF6BO95407 300 aa8.9□□□□□ -0.98
PDLIM7-210ENST00000503827 TMEM141Q96I45 108 aa8.9□□□□□ -0.98
PDLIM7-210ENST00000503827 PYGO1Q9Y3Y4 419 aa8.9□□□□□ -0.98
PDLIM7-210ENST00000503827 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
PDLIM7-210ENST00000503827 F8VRH5 84 aa8.89□□□□□ -0.99
PDLIM7-210ENST00000503827 TMEM250H0YL14 139 aa8.89□□□□□ -0.99
PDLIM7-210ENST00000503827 MT1HP80294 61 aa8.89□□□□□ -0.99
PDLIM7-210ENST00000503827 TEX43Q6ZNM6 134 aa8.89□□□□□ -0.99
PDLIM7-210ENST00000503827 C2orf88Q9BSF0 95 aa8.89□□□□□ -0.99
PDLIM7-210ENST00000503827 PRLHP81277 87 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms