RNA–Protein interactions for RNA: ENST00000498724.5

TNC-208, Transcript of tenascin C, humanhuman

TSL 2

Gene TNC, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-208ENST00000498724 DEFB131AP59861 70 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 HERV-K104P63124 156 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 KRTAP1-1Q07627 177 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 PIK3CD-AS1Q5SR53 167 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 C9orf153Q5TBE3 101 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 Q6ZSN1 163 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 C10orf105Q8TEF2 133 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 LINC01587Q99440 93 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 CITED2Q99967 270 aaPredicted RBP3.22□□□□□ -1.89
TNC-208ENST00000498724 CDKN2A-AS1Q9UH64 79 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 CSPG4Q6UVK1 2322 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 HIVEP2P31629 2446 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 JMJD1CQ15652 2540 aa3.22□□□□□ -1.89
TNC-208ENST00000498724 IGLV5-39A0A0G2JS06 123 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 A0A0U1RRA0 63 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 RBMY1BA6NDE4 496 aaKnown RBP3.21□□□□□ -1.9
TNC-208ENST00000498724 RBMY1EA6NEQ0 496 aaKnown RBP3.21□□□□□ -1.9
TNC-208ENST00000498724 A8MTW9 85 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 INSP01308 110 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 IGHV3-53P01767 116 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 IGHV4-59P01825 116 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 ATP5G1P05496 136 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 RBMY1DP0C7P1 496 aaKnown RBP3.21□□□□□ -1.9
TNC-208ENST00000498724 INAFM2P0DMQ5 153 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 HOXD3P31249 432 aaPredicted RBP3.21□□□□□ -1.9
TNC-208ENST00000498724 CXCL5P42830 114 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 FAM222AQ5U5X8 452 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 C10orf99Q6UWK7 81 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 C3orf22Q8N5N4 141 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 ZNF625Q96I27 306 aaPredicted RBP3.21□□□□□ -1.9
TNC-208ENST00000498724 OVOL2Q9BRP0 275 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 PEMTQ9UBM1 199 aa3.21□□□□□ -1.9
TNC-208ENST00000498724 CR1P17927 2039 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 IGHV4-30-2A0A087WSY4 118 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 TRAV13-2A0A0B4J235 113 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 SMIM1B2RUZ4 78 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 B4DSR2 109 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 UQCRQO14949 82 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 CRPP02741 224 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 COX6A2Q02221 97 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 DAZ2Q13117 558 aaKnown RBP3.2□□□□□ -1.9
TNC-208ENST00000498724 DEFB112Q30KQ8 113 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 BEAN1Q3B7T3 259 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 GAGE2AQ6NT46 116 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 CFAP161Q6P656 301 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 SOSTDC1Q6X4U4 206 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 SDIM1Q6ZPB5 146 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 FAM19A3Q7Z5A8 133 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 DAZ4Q86SG3 579 aaKnown RBP3.2□□□□□ -1.9
TNC-208ENST00000498724 C3orf56Q8N813 242 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 SMCR5Q8TEV8 140 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 DYNLRB2Q8TF09 96 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 PPDPFQ9H3Y8 114 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 DAZ3Q9NR90 486 aaKnown RBP3.2□□□□□ -1.9
TNC-208ENST00000498724 ZANQ9Y493 2812 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 CUBNO60494 3623 aa3.2□□□□□ -1.9
TNC-208ENST00000498724 TRAV13-1A0A0B4J241 112 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 NDUFA7O95182 113 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 DNAL4O96015 105 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 MALP21145 153 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 SLURP1P55000 103 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 DSCR9P59020 149 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 RPL36AP83881 106 aaKnown RBP3.19□□□□□ -1.9
TNC-208ENST00000498724 Q8N2B8 174 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 C11orf72Q8NBR9 251 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 RPL36ALQ969Q0 106 aaKnown RBP3.19□□□□□ -1.9
TNC-208ENST00000498724 LINC00526Q96FQ7 95 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 UBE2E2Q96LR5 201 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 MAP6D1Q9H9H5 199 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 Q9UF83 564 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 VPREB3Q9UKI3 123 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 TLN2Q9Y4G6 2542 aa3.19□□□□□ -1.9
TNC-208ENST00000498724 NSD1Q96L73 2696 aaPredicted RBP3.18□□□□□ -1.9
TNC-208ENST00000498724 TRGV1A0A0A0MS02 117 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 TRBV10-1A0A0K0K1A3 114 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 J3QLI3 93 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 K7EQD1 137 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 ATOX1O00244 68 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 UBE2L6O14933 153 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 PRM2P04554 102 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 LINC00694P0DN24 101 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 COX7CP15954 63 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 RPL28P46779 137 aaKnown RBP3.18□□□□□ -1.9
TNC-208ENST00000498724 KRTAP24-1Q3LI83 254 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 HIST2H2BDQ6DRA6 164 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 Q6JHZ5 121 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 C5orf38Q86SI9 138 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.18□□□□□ -1.9
TNC-208ENST00000498724 COX7B2Q8TF08 81 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 FAM218AQ96MZ4 157 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 TMEM243Q9BU79 118 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 ZNF702PQ9H963 129 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 CSDC2Q9Y534 153 aaKnown RBP3.18□□□□□ -1.9
TNC-208ENST00000498724 FBN3Q75N90 2809 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
TNC-208ENST00000498724 SONP18583 2426 aaKnown RBP3.17□□□□□ -1.9
TNC-208ENST00000498724 F5H768 121 aa3.17□□□□□ -1.9
TNC-208ENST00000498724 H0YGX0 51 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms