RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ESRGQ1W209 222 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 ORMDL2Q53FV1 153 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 NTM-AS1Q6ZSK4 140 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 NIT1Q86X76 327 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 BAGE3Q86Y29 109 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 TMEM243Q9BU79 118 aa3.38□□□□□ -1.87
FXN-205ENST00000498653 MRPS16Q9Y3D3 137 aaKnown RBP3.38□□□□□ -1.87
FXN-205ENST00000498653 TMEM262E9PQX1 116 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 UBE2L6O14933 153 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BKO60814 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BJP06899 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BOP23527 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 G0S2P27469 103 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BBP33778 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BDP58876 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 PKIAP61925 76 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BCP62807 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 SMAGPQ0VAQ4 97 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 LAGE3Q14657 143 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST2H2BEQ16778 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.37□□□□□ -1.87
FXN-205ENST00000498653 C10orf25Q5T742 122 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 DGAT2L7PQ6IED9 249 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 RNASEKQ6P5S7 137 aaKnown RBP3.37□□□□□ -1.87
FXN-205ENST00000498653 MPLKIPQ8TAP9 179 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BHQ93079 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 TMEM18Q96B42 140 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 CHCHD1Q96BP2 118 aaKnown RBP3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BNQ99877 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 HIST1H2BMQ99879 126 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 CHCHD5Q9BSY4 110 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 CHCHD7Q9BUK0 85 aa3.37□□□□□ -1.87
FXN-205ENST00000498653 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.36□□□□□ -1.87
FXN-205ENST00000498653 IGKV2-29A2NJV5 120 aaPredicted RBP3.36□□□□□ -1.87
FXN-205ENST00000498653 LINC01546A6NGU7 62 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 LINC01549A6NIU2 74 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 H7C423 109 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 HSBP1O75506 76 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 SERF1AO75920 110 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 ESDP10768 282 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 NDUFA6P56556 154 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 GAGE6Q13070 117 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 AMMECR1LQ6DCA0 310 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 C20orf203Q8NBC4 194 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 URB1-AS1Q96HZ7 61 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 UPK3BQ9BT76 320 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 CYSLTR1Q9Y271 337 aa3.36□□□□□ -1.87
FXN-205ENST00000498653 A0A087WX48 190 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 SIVA1O15304 175 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 HBDP02042 147 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 S100A6P06703 90 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 FGF6P10767 208 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 RPL39P62891 51 aaKnown RBP3.35□□□□□ -1.87
FXN-205ENST00000498653 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 MRPL52Q86TS9 123 aaKnown RBP3.35□□□□□ -1.87
FXN-205ENST00000498653 WFDC10BQ8IUB3 73 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 TMEM101Q96IK0 257 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 TIMM21Q9BVV7 248 aa3.35□□□□□ -1.87
FXN-205ENST00000498653 TRAV9-2A0A087WT02 112 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 A0A0J9YXV3 536 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 A0A1B0GUV1 79 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 IGHV3-30P01768 117 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 IGHV3-33P01772 117 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 IGHV3-30-3P0DP02 117 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 IGHV3-30-5P0DP03 117 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 ZNF25P17030 456 aaPredicted RBP3.34□□□□□ -1.87
FXN-205ENST00000498653 RBX1P62877 108 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 PMCHL1Q16048 86 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 LINC01556Q5JQF7 62 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 COA6Q5JTJ3 125 aaKnown RBP3.34□□□□□ -1.87
FXN-205ENST00000498653 OR5A1Q8NGJ0 315 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 TOMM6Q96B49 74 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 SPANXA1Q9NS26 97 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 UBE2D4Q9Y2X8 147 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 PYGO1Q9Y3Y4 419 aa3.34□□□□□ -1.87
FXN-205ENST00000498653 IGLV4-60A0A075B6I1 120 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.33□□□□□ -1.88
FXN-205ENST00000498653 K7EP13 123 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 NUPR1O60356 82 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 ATP5LO75964 103 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 ANGP03950 147 aaKnown RBP3.33□□□□□ -1.88
FXN-205ENST00000498653 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
FXN-205ENST00000498653 MPV17L2Q567V2 206 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 PDZD11Q5EBL8 140 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 Q6ZN92 141 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 ERASQ7Z444 233 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 FAM19A2Q8N3H0 131 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 Q8N976 141 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 TMEM141Q96I45 108 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 TIMM17AQ99595 171 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 CHAC1Q9BUX1 264 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
FXN-205ENST00000498653 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
FXN-205ENST00000498653 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms