RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
MUC1-220ENST00000498431 I3L3M4 83 aa9.89□□□□□ -0.83
MUC1-220ENST00000498431 VCYO14598 125 aa9.89□□□□□ -0.83
MUC1-220ENST00000498431 FGF6P10767 208 aa9.89□□□□□ -0.83
MUC1-220ENST00000498431 PMCHP20382 165 aa9.89□□□□□ -0.83
MUC1-220ENST00000498431 RPL32P62910 135 aaKnown RBP9.89□□□□□ -0.83
MUC1-220ENST00000498431 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
MUC1-220ENST00000498431 RAB5AP20339 215 aa9.88□□□□□ -0.83
MUC1-220ENST00000498431 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
MUC1-220ENST00000498431 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
MUC1-220ENST00000498431 PRSS47A8MTI9 375 aa9.87□□□□□ -0.83
MUC1-220ENST00000498431 CCL25O15444 150 aa9.87□□□□□ -0.83
MUC1-220ENST00000498431 OR5A1Q8NGJ0 315 aa9.87□□□□□ -0.83
MUC1-220ENST00000498431 ALKBH7Q9BT30 221 aaPredicted RBP9.87□□□□□ -0.83
MUC1-220ENST00000498431 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
MUC1-220ENST00000498431 IGHV1-58A0A0C4DH39 117 aa9.86□□□□□ -0.83
MUC1-220ENST00000498431 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
MUC1-220ENST00000498431 KIR2DL4Q99706 377 aa9.86□□□□□ -0.83
MUC1-220ENST00000498431 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
MUC1-220ENST00000498431 H7C423 109 aa9.85□□□□□ -0.83
MUC1-220ENST00000498431 FCER1GP30273 86 aa9.85□□□□□ -0.83
MUC1-220ENST00000498431 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
MUC1-220ENST00000498431 A0A1W2PNN7 141 aa9.84□□□□□ -0.83
MUC1-220ENST00000498431 TCAPO15273 167 aa9.84□□□□□ -0.83
MUC1-220ENST00000498431 TSHBP01222 138 aa9.84□□□□□ -0.83
MUC1-220ENST00000498431 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
MUC1-220ENST00000498431 PKIGQ9Y2B9 76 aa9.84□□□□□ -0.83
MUC1-220ENST00000498431 MUC2Q02817 5179 aa9.83□□□□□ -0.84
MUC1-220ENST00000498431 TRGC2P03986 189 aa9.83□□□□□ -0.84
MUC1-220ENST00000498431 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
MUC1-220ENST00000498431 GAGE2BQ13066 116 aa9.83□□□□□ -0.84
MUC1-220ENST00000498431 Q8N8P6 123 aa9.83□□□□□ -0.84
MUC1-220ENST00000498431 NXT2Q9NPJ8 142 aaKnown RBP9.83□□□□□ -0.84
MUC1-220ENST00000498431 PSORS1C2Q9UIG4 136 aa9.83□□□□□ -0.84
MUC1-220ENST00000498431 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
MUC1-220ENST00000498431 IFI27P40305 119 aaPredicted RBP9.81□□□□□ -0.84
MUC1-220ENST00000498431 IGLV4-69A0A075B6H9 119 aa9.8□□□□□ -0.84
MUC1-220ENST00000498431 LOC107984640A0A0U1RRK4 108 aa9.8□□□□□ -0.84
MUC1-220ENST00000498431 K7EMI3 77 aa9.8□□□□□ -0.84
MUC1-220ENST00000498431 ESDP10768 282 aa9.8□□□□□ -0.84
MUC1-220ENST00000498431 CD164L2Q6UWJ8 174 aa9.8□□□□□ -0.84
MUC1-220ENST00000498431 TMEM101Q96IK0 257 aa9.8□□□□□ -0.84
MUC1-220ENST00000498431 SS18Q15532 418 aa9.79□□□□□ -0.84
MUC1-220ENST00000498431 PRR26Q8N8Z3 221 aa9.79□□□□□ -0.84
MUC1-220ENST00000498431 C18orf32Q8TCD1 76 aa9.79□□□□□ -0.84
MUC1-220ENST00000498431 ORMDL2Q53FV1 153 aa9.78□□□□□ -0.84
MUC1-220ENST00000498431 C9orf116Q5BN46 136 aaPredicted RBP9.78□□□□□ -0.84
MUC1-220ENST00000498431 FA2HQ7L5A8 372 aa9.78□□□□□ -0.84
MUC1-220ENST00000498431 PHF5AQ7RTV0 110 aaKnown RBP9.78□□□□□ -0.84
MUC1-220ENST00000498431 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
MUC1-220ENST00000498431 CDC42SE2Q9NRR3 84 aa9.78□□□□□ -0.84
MUC1-220ENST00000498431 C1orf137Q5JT78 98 aa9.77□□□□□ -0.85
MUC1-220ENST00000498431 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
MUC1-220ENST00000498431 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.76□□□□□ -0.85
MUC1-220ENST00000498431 RAB5BP61020 215 aa9.76□□□□□ -0.85
MUC1-220ENST00000498431 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
MUC1-220ENST00000498431 MRPL52Q86TS9 123 aaKnown RBP9.76□□□□□ -0.85
MUC1-220ENST00000498431 ZNF664Q8N3J9 261 aa9.76□□□□□ -0.85
MUC1-220ENST00000498431 LINC00614P0C842 121 aa9.75□□□□□ -0.85
MUC1-220ENST00000498431 G0S2P27469 103 aa9.75□□□□□ -0.85
MUC1-220ENST00000498431 APOMO95445 188 aa9.74□□□□□ -0.85
MUC1-220ENST00000498431 MALP21145 153 aa9.74□□□□□ -0.85
MUC1-220ENST00000498431 RPL18AQ02543 176 aaKnown RBP9.74□□□□□ -0.85
MUC1-220ENST00000498431 BAGE3Q86Y29 109 aa9.74□□□□□ -0.85
MUC1-220ENST00000498431 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
MUC1-220ENST00000498431 COX7A2LO14548 114 aa9.73□□□□□ -0.85
MUC1-220ENST00000498431 RNASE13Q5GAN3 156 aaKnown RBP9.73□□□□□ -0.85
MUC1-220ENST00000498431 KRTAP11-1Q8IUC1 163 aa9.73□□□□□ -0.85
MUC1-220ENST00000498431 URB1-AS1Q96HZ7 61 aa9.73□□□□□ -0.85
MUC1-220ENST00000498431 OPRPNQ99935 248 aaPredicted RBP9.73□□□□□ -0.85
MUC1-220ENST00000498431 TIMM21Q9BVV7 248 aa9.73□□□□□ -0.85
MUC1-220ENST00000498431 CYSLTR1Q9Y271 337 aa9.73□□□□□ -0.85
MUC1-220ENST00000498431 C1orf196B1AJZ1 125 aa9.72□□□□□ -0.85
MUC1-220ENST00000498431 RPL39P62891 51 aaKnown RBP9.72□□□□□ -0.85
MUC1-220ENST00000498431 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
MUC1-220ENST00000498431 CHCHD1Q96BP2 118 aaKnown RBP9.72□□□□□ -0.85
MUC1-220ENST00000498431 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
MUC1-220ENST00000498431 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
MUC1-220ENST00000498431 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
MUC1-220ENST00000498431 IGLV7-43P04211 117 aa9.71□□□□□ -0.86
MUC1-220ENST00000498431 C5orf38Q86SI9 138 aa9.71□□□□□ -0.86
MUC1-220ENST00000498431 C2orf48Q96LS8 159 aa9.71□□□□□ -0.86
MUC1-220ENST00000498431 LINC01549A6NIU2 74 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BKO60814 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BJP06899 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BOP23527 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BBP33778 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BDP58876 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BCP62807 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST2H2BEQ16778 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BHQ93079 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 DIRC1Q969H9 104 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 TOMM6Q96B49 74 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BNQ99877 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 HIST1H2BMQ99879 126 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
MUC1-220ENST00000498431 TRAV13-1A0A0B4J241 112 aa9.69□□□□□ -0.86
MUC1-220ENST00000498431 FAM168BA1KXE4 195 aa9.69□□□□□ -0.86
MUC1-220ENST00000498431 H0Y9J4 135 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms