RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 CKS2P33552 79 aa7.33□□□□□ -1.24
NUDCD3-211ENST00000497978 PEA15Q15121 130 aa7.33□□□□□ -1.24
NUDCD3-211ENST00000497978 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
NUDCD3-211ENST00000497978 F8W036 122 aa7.32□□□□□ -1.24
NUDCD3-211ENST00000497978 RPL32P62910 135 aaKnown RBP7.32□□□□□ -1.24
NUDCD3-211ENST00000497978 Q6ZUT4 128 aa7.32□□□□□ -1.24
NUDCD3-211ENST00000497978 C5orf38Q86SI9 138 aa7.32□□□□□ -1.24
NUDCD3-211ENST00000497978 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
NUDCD3-211ENST00000497978 TNFRSF6BO95407 300 aa7.31□□□□□ -1.24
NUDCD3-211ENST00000497978 SMDT1Q9H4I9 107 aa7.31□□□□□ -1.24
NUDCD3-211ENST00000497978 A0A0J9YXV3 536 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 C9JQL5 133 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 LINC00310P59036 64 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 HBBP68871 147 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 RPL18AQ02543 176 aaKnown RBP7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 SPAG11BQ08648 103 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 SMIM2Q9BVW6 85 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 SPANXA1Q9NS26 97 aa7.3□□□□□ -1.24
NUDCD3-211ENST00000497978 D6R8Y8 96 aa7.29□□□□□ -1.24
NUDCD3-211ENST00000497978 F8WDY8 70 aa7.29□□□□□ -1.24
NUDCD3-211ENST00000497978 PPBPP02775 128 aa7.29□□□□□ -1.24
NUDCD3-211ENST00000497978 RPL39P62891 51 aaKnown RBP7.29□□□□□ -1.24
NUDCD3-211ENST00000497978 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
NUDCD3-211ENST00000497978 MRPL54Q6P161 138 aaKnown RBP7.29□□□□□ -1.24
NUDCD3-211ENST00000497978 A0A1W2PNN7 141 aa7.28□□□□□ -1.24
NUDCD3-211ENST00000497978 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.28□□□□□ -1.24
NUDCD3-211ENST00000497978 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
NUDCD3-211ENST00000497978 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
NUDCD3-211ENST00000497978 C9orf116Q5BN46 136 aaPredicted RBP7.28□□□□□ -1.24
NUDCD3-211ENST00000497978 ORAOV1Q8WV07 137 aa7.28□□□□□ -1.24
NUDCD3-211ENST00000497978 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 NDUFA1O15239 70 aa7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 NPYP01303 97 aa7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 MT-ND6P03923 174 aa7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 RAB5AP20339 215 aa7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 IMMP2LQ96T52 175 aa7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 OPRPNQ99935 248 aaPredicted RBP7.27□□□□□ -1.25
NUDCD3-211ENST00000497978 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
NUDCD3-211ENST00000497978 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
NUDCD3-211ENST00000497978 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
NUDCD3-211ENST00000497978 MRPL35Q9NZE8 188 aaKnown RBP7.26□□□□□ -1.25
NUDCD3-211ENST00000497978 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 A0A1B0GVG6 124 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 IFI27P40305 119 aaPredicted RBP7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 KRTAP10-8P60410 259 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 TMEM136Q6ZRR5 245 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 ATP5L2Q7Z4Y8 100 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 PSORS1C2Q9UIG4 136 aa7.25□□□□□ -1.25
NUDCD3-211ENST00000497978 C1orf137Q5JT78 98 aa7.24□□□□□ -1.25
NUDCD3-211ENST00000497978 FAM104AQ969W3 186 aa7.24□□□□□ -1.25
NUDCD3-211ENST00000497978 PHF5AQ7RTV0 110 aaKnown RBP7.23□□□□□ -1.25
NUDCD3-211ENST00000497978 PYGO1Q9Y3Y4 419 aa7.23□□□□□ -1.25
NUDCD3-211ENST00000497978 TLX1NBP0CAT3 122 aa7.22□□□□□ -1.25
NUDCD3-211ENST00000497978 ODF1Q14990 250 aa7.22□□□□□ -1.25
NUDCD3-211ENST00000497978 UNQ6190/PRO20217Q6UXQ8 127 aa7.22□□□□□ -1.25
NUDCD3-211ENST00000497978 TMEM141Q96I45 108 aa7.22□□□□□ -1.25
NUDCD3-211ENST00000497978 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
NUDCD3-211ENST00000497978 IGLV4-3A0A075B6K6 122 aa7.21□□□□□ -1.26
NUDCD3-211ENST00000497978 A0A087WZ39 114 aa7.21□□□□□ -1.26
NUDCD3-211ENST00000497978 C10orf25Q5T742 122 aa7.21□□□□□ -1.26
NUDCD3-211ENST00000497978 TEX43Q6ZNM6 134 aa7.21□□□□□ -1.26
NUDCD3-211ENST00000497978 MAP1LC3AQ9H492 121 aa7.21□□□□□ -1.26
NUDCD3-211ENST00000497978 C6orf48Q9UBA6 75 aa7.21□□□□□ -1.26
NUDCD3-211ENST00000497978 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 PRSS47A8MTI9 375 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 PNRC1Q12796 327 aaPredicted RBP7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 GAGE2EQ4V326 116 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 LINC00242Q5T6M2 205 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 Q6ZN92 141 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 DIRC1Q969H9 104 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 C2orf88Q9BSF0 95 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 GAGE2DQ9UEU5 116 aa7.2□□□□□ -1.26
NUDCD3-211ENST00000497978 TRBV30A0A0K0K1B3 111 aa7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 FAM168BA1KXE4 195 aa7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 MT-ND4LP03901 98 aa7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 IGLV7-43P04211 117 aa7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 FAM19A5Q7Z5A7 132 aaPredicted RBP7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 PACRGQ96M98 296 aaPredicted RBP7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 CYSLTR1Q9Y271 337 aa7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 TNXBP22105 4242 aa7.19□□□□□ -1.26
NUDCD3-211ENST00000497978 KIAA0087Q14695 138 aa7.18□□□□□ -1.26
NUDCD3-211ENST00000497978 ORMDL2Q53FV1 153 aa7.18□□□□□ -1.26
NUDCD3-211ENST00000497978 LINC01561Q8N1V8 128 aa7.18□□□□□ -1.26
NUDCD3-211ENST00000497978 Q8N8P6 123 aa7.18□□□□□ -1.26
NUDCD3-211ENST00000497978 VCX2Q9H322 139 aa7.18□□□□□ -1.26
NUDCD3-211ENST00000497978 PRSS2P07478 247 aa7.17□□□□□ -1.26
NUDCD3-211ENST00000497978 UBE2D1P51668 147 aa7.17□□□□□ -1.26
NUDCD3-211ENST00000497978 RAB14P61106 215 aa7.17□□□□□ -1.26
NUDCD3-211ENST00000497978 UBE2BP63146 152 aa7.17□□□□□ -1.26
NUDCD3-211ENST00000497978 C2orf66Q6UXQ4 117 aa7.17□□□□□ -1.26
NUDCD3-211ENST00000497978 C9orf118A6NHY6 69 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 NDUFC2-KCTD14E9PQ53 114 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 K7EMI3 77 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 M0QXV9 152 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 NPSP0C0P6 89 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 C2orf82Q6UX34 121 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
NUDCD3-211ENST00000497978 LRP2P98164 4655 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms