RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
MRPL55-234ENST00000497758 CHAC1Q9BUX1 264 aa7.58□□□□□ -1.2
MRPL55-234ENST00000497758 FAT1Q14517 4588 aa7.58□□□□□ -1.2
MRPL55-234ENST00000497758 FAM229AH3BQW9 127 aa7.57□□□□□ -1.2
MRPL55-234ENST00000497758 SCXQ7RTU7 201 aa7.57□□□□□ -1.2
MRPL55-234ENST00000497758 TOMM6Q96B49 74 aa7.57□□□□□ -1.2
MRPL55-234ENST00000497758 LINC00526Q96FQ7 95 aa7.57□□□□□ -1.2
MRPL55-234ENST00000497758 LINC01549A6NIU2 74 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 IGIPA6NJ69 53 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 Q5VSD8 79 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 SDIM1Q6ZPB5 146 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 CBLN2Q8IUK8 224 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 CARD19Q96LW7 228 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
MRPL55-234ENST00000497758 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
MRPL55-234ENST00000497758 LINC01546A6NGU7 62 aa7.55□□□□□ -1.2
MRPL55-234ENST00000497758 SYCNQ0VAF6 134 aa7.55□□□□□ -1.2
MRPL55-234ENST00000497758 ERASQ7Z444 233 aa7.55□□□□□ -1.2
MRPL55-234ENST00000497758 DPH3Q96FX2 82 aa7.55□□□□□ -1.2
MRPL55-234ENST00000497758 PKIGQ9Y2B9 76 aa7.55□□□□□ -1.2
MRPL55-234ENST00000497758 IGLV4-69A0A075B6H9 119 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 UBE2D1P51668 147 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 SPAG11BQ08648 103 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 LINC00242Q5T6M2 205 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 ZC2HC1BQ5TFG8 222 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 LINC00173Q6ZV60 143 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 OR10D4PQ8NGN7 298 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 CIRBP-AS1Q8TBR5 109 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 YPEL4Q96NS1 127 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 CAMK2N2Q96S95 79 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 AMELXQ99217 191 aa7.54□□□□□ -1.2
MRPL55-234ENST00000497758 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
MRPL55-234ENST00000497758 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
MRPL55-234ENST00000497758 RAB5BP61020 215 aa7.53□□□□□ -1.2
MRPL55-234ENST00000497758 SEC11AP67812 179 aa7.53□□□□□ -1.2
MRPL55-234ENST00000497758 COX6A2Q02221 97 aa7.53□□□□□ -1.2
MRPL55-234ENST00000497758 LINC00528Q8N1L1 170 aa7.53□□□□□ -1.2
MRPL55-234ENST00000497758 A0A087WZ39 114 aa7.52□□□□□ -1.21
MRPL55-234ENST00000497758 LINC00614P0C842 121 aa7.52□□□□□ -1.21
MRPL55-234ENST00000497758 C2orf48Q96LS8 159 aa7.52□□□□□ -1.21
MRPL55-234ENST00000497758 GEMIN7Q9H840 131 aaKnown RBP7.52□□□□□ -1.21
MRPL55-234ENST00000497758 IGKV2-24A0A0C4DH68 120 aa7.51□□□□□ -1.21
MRPL55-234ENST00000497758 PANO1I0J062 215 aa7.51□□□□□ -1.21
MRPL55-234ENST00000497758 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
MRPL55-234ENST00000497758 CHTF8P0CG12 524 aa7.51□□□□□ -1.21
MRPL55-234ENST00000497758 HERVK_113P63121 156 aa7.51□□□□□ -1.21
MRPL55-234ENST00000497758 F8WDY8 70 aa7.5□□□□□ -1.21
MRPL55-234ENST00000497758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.5□□□□□ -1.21
MRPL55-234ENST00000497758 HBDP02042 147 aa7.5□□□□□ -1.21
MRPL55-234ENST00000497758 MAJINQ3KP22 176 aa7.5□□□□□ -1.21
MRPL55-234ENST00000497758 Q6ZRU5 148 aa7.5□□□□□ -1.21
MRPL55-234ENST00000497758 SPACA4Q8TDM5 124 aa7.5□□□□□ -1.21
MRPL55-234ENST00000497758 LINC00474Q9P2X8 69 aa7.5□□□□□ -1.21
MRPL55-234ENST00000497758 NDUFA1O15239 70 aa7.49□□□□□ -1.21
MRPL55-234ENST00000497758 CIRBPQ14011 172 aaKnown RBP7.49□□□□□ -1.21
MRPL55-234ENST00000497758 PMCHL1Q16048 86 aa7.49□□□□□ -1.21
MRPL55-234ENST00000497758 LINC01561Q8N1V8 128 aa7.49□□□□□ -1.21
MRPL55-234ENST00000497758 PACRGQ96M98 296 aaPredicted RBP7.49□□□□□ -1.21
MRPL55-234ENST00000497758 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
MRPL55-234ENST00000497758 VPS13BQ7Z7G8 4022 aa7.49□□□□□ -1.21
MRPL55-234ENST00000497758 A0A087WYN8 130 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 A0A096LNI7 61 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 A0A0J9YXV3 536 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 LOC107984640A0A0U1RRK4 108 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 PRSS2P07478 247 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 NDUFA6P56556 154 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 PMVKQ15126 192 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 FAM19A3Q7Z5A8 133 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 LINC00469Q8N7U9 141 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 URB1-AS1Q96HZ7 61 aa7.48□□□□□ -1.21
MRPL55-234ENST00000497758 TRGC2P03986 189 aa7.47□□□□□ -1.21
MRPL55-234ENST00000497758 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
MRPL55-234ENST00000497758 GAGE2BQ13066 116 aa7.47□□□□□ -1.21
MRPL55-234ENST00000497758 BAGE3Q86Y29 109 aa7.47□□□□□ -1.21
MRPL55-234ENST00000497758 CHCHD1Q96BP2 118 aaKnown RBP7.47□□□□□ -1.21
MRPL55-234ENST00000497758 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
MRPL55-234ENST00000497758 TOMM7Q9P0U1 55 aa7.47□□□□□ -1.21
MRPL55-234ENST00000497758 CDKN2A-AS1Q9UH64 79 aa7.47□□□□□ -1.21
MRPL55-234ENST00000497758 A0A096LNJ9 63 aa7.46□□□□□ -1.22
MRPL55-234ENST00000497758 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
MRPL55-234ENST00000497758 ATP5LO75964 103 aa7.46□□□□□ -1.22
MRPL55-234ENST00000497758 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.22
MRPL55-234ENST00000497758 RNF151Q2KHN1 245 aa7.46□□□□□ -1.22
MRPL55-234ENST00000497758 STPG4Q8N801 248 aa7.46□□□□□ -1.22
MRPL55-234ENST00000497758 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
MRPL55-234ENST00000497758 CKS1BP61024 79 aa7.45□□□□□ -1.22
MRPL55-234ENST00000497758 RPL37AP61513 92 aaKnown RBP7.45□□□□□ -1.22
MRPL55-234ENST00000497758 PDZD11Q5EBL8 140 aa7.45□□□□□ -1.22
MRPL55-234ENST00000497758 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
MRPL55-234ENST00000497758 PLAC8Q9NZF1 115 aa7.45□□□□□ -1.22
MRPL55-234ENST00000497758 COLCA2A8K830 154 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 H3BRM9 83 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 HSBP1O75506 76 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 KIAA0087Q14695 138 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
MRPL55-234ENST00000497758 C10orf25Q5T742 122 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms