RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
HLA-B-254ENST00000497377 ALKBH7Q9BT30 221 aaPredicted RBP7.44□□□□□ -1.22
HLA-B-254ENST00000497377 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
HLA-B-254ENST00000497377 GVQW2A0A096LPI5 108 aaPredicted RBP7.43□□□□□ -1.22
HLA-B-254ENST00000497377 TGIF2-C20orf24A0A0A6YYL0 155 aa7.43□□□□□ -1.22
HLA-B-254ENST00000497377 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
HLA-B-254ENST00000497377 LINC01549A6NIU2 74 aa7.43□□□□□ -1.22
HLA-B-254ENST00000497377 RNASE13Q5GAN3 156 aaKnown RBP7.43□□□□□ -1.22
HLA-B-254ENST00000497377 C2orf66Q6UXQ4 117 aa7.43□□□□□ -1.22
HLA-B-254ENST00000497377 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
HLA-B-254ENST00000497377 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
HLA-B-254ENST00000497377 IFITM10A6NMD0 228 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 COX7A2LO14548 114 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 LINC01620Q4KN68 170 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 Q6ZN92 141 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 FAM104AQ969W3 186 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 FAM30AQ9NZY2 134 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 TRAPPC1Q9Y5R8 145 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 RYR1P21817 5038 aa7.42□□□□□ -1.22
HLA-B-254ENST00000497377 IGLV4-3A0A075B6K6 122 aa7.41□□□□□ -1.22
HLA-B-254ENST00000497377 LINC01546A6NGU7 62 aa7.41□□□□□ -1.22
HLA-B-254ENST00000497377 MALP21145 153 aa7.41□□□□□ -1.22
HLA-B-254ENST00000497377 PAPPA-AS1Q5QFB9 102 aa7.41□□□□□ -1.22
HLA-B-254ENST00000497377 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 IGIPA6NJ69 53 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 APOMO95445 188 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 TEX43Q6ZNM6 134 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 FA2HQ7L5A8 372 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 SLC7A5P1Q8MH63 180 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.22
HLA-B-254ENST00000497377 C2orf88Q9BSF0 95 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 SMCO4Q9NRQ5 59 aa7.4□□□□□ -1.22
HLA-B-254ENST00000497377 ZNF561-AS1K7EIQ3 104 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 SLPIP03973 132 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 SDIM1Q6ZPB5 146 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 YPEL4Q96NS1 127 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 TIMM17AQ99595 171 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 CHAC1Q9BUX1 264 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 VCX2Q9H322 139 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
HLA-B-254ENST00000497377 IGHV3OR16-9A0A0B4J2B5 98 aa7.38□□□□□ -1.23
HLA-B-254ENST00000497377 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
HLA-B-254ENST00000497377 ERASQ7Z444 233 aa7.38□□□□□ -1.23
HLA-B-254ENST00000497377 C5orf38Q86SI9 138 aa7.38□□□□□ -1.23
HLA-B-254ENST00000497377 AMELXQ99217 191 aa7.38□□□□□ -1.23
HLA-B-254ENST00000497377 SEC11AP67812 179 aa7.37□□□□□ -1.23
HLA-B-254ENST00000497377 SCXQ7RTU7 201 aa7.37□□□□□ -1.23
HLA-B-254ENST00000497377 OR10D4PQ8NGN7 298 aa7.37□□□□□ -1.23
HLA-B-254ENST00000497377 SCGB3A1Q96QR1 104 aa7.37□□□□□ -1.23
HLA-B-254ENST00000497377 F8WDY8 70 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 UBE2D1P51668 147 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 RAB5BP61020 215 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 HAMPP81172 84 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 LINC00242Q5T6M2 205 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 LINC00173Q6ZV60 143 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 C18orf32Q8TCD1 76 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 C2orf48Q96LS8 159 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 CARD19Q96LW7 228 aa7.36□□□□□ -1.23
HLA-B-254ENST00000497377 A0A087WZ39 114 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 LINC00614P0C842 121 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 SYCNQ0VAF6 134 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 CIRBPQ14011 172 aaKnown RBP7.35□□□□□ -1.23
HLA-B-254ENST00000497377 FAM19A3Q7Z5A8 133 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 CBLN2Q8IUK8 224 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 LINC01561Q8N1V8 128 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 CIRBP-AS1Q8TBR5 109 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
HLA-B-254ENST00000497377 IGLV4-69A0A075B6H9 119 aa7.34□□□□□ -1.23
HLA-B-254ENST00000497377 SMR3BP02814 79 aaPredicted RBP7.34□□□□□ -1.23
HLA-B-254ENST00000497377 SPAG11BQ08648 103 aa7.34□□□□□ -1.23
HLA-B-254ENST00000497377 Q5VSD8 79 aa7.34□□□□□ -1.23
HLA-B-254ENST00000497377 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
HLA-B-254ENST00000497377 DNAH8Q96JB1 4490 aa7.34□□□□□ -1.23
HLA-B-254ENST00000497377 HERVK_113P63121 156 aa7.33□□□□□ -1.24
HLA-B-254ENST00000497377 COX6A2Q02221 97 aa7.33□□□□□ -1.24
HLA-B-254ENST00000497377 ORAOV1Q8WV07 137 aa7.33□□□□□ -1.24
HLA-B-254ENST00000497377 LINC00526Q96FQ7 95 aa7.33□□□□□ -1.24
HLA-B-254ENST00000497377 CAMK2N2Q96S95 79 aa7.33□□□□□ -1.24
HLA-B-254ENST00000497377 LINC00474Q9P2X8 69 aa7.33□□□□□ -1.24
HLA-B-254ENST00000497377 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.32□□□□□ -1.24
HLA-B-254ENST00000497377 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
HLA-B-254ENST00000497377 ZC2HC1BQ5TFG8 222 aa7.32□□□□□ -1.24
HLA-B-254ENST00000497377 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
HLA-B-254ENST00000497377 HBDP02042 147 aa7.31□□□□□ -1.24
HLA-B-254ENST00000497377 RNF151Q2KHN1 245 aa7.31□□□□□ -1.24
HLA-B-254ENST00000497377 Q6ZRU5 148 aa7.31□□□□□ -1.24
HLA-B-254ENST00000497377 DPH3Q96FX2 82 aa7.31□□□□□ -1.24
HLA-B-254ENST00000497377 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
HLA-B-254ENST00000497377 GEMIN7Q9H840 131 aaKnown RBP7.31□□□□□ -1.24
HLA-B-254ENST00000497377 LOC107984640A0A0U1RRK4 108 aa7.3□□□□□ -1.24
HLA-B-254ENST00000497377 PANO1I0J062 215 aa7.3□□□□□ -1.24
HLA-B-254ENST00000497377 NDUFA1O15239 70 aa7.3□□□□□ -1.24
HLA-B-254ENST00000497377 PMVKQ15126 192 aa7.3□□□□□ -1.24
HLA-B-254ENST00000497377 CHCHD1Q96BP2 118 aaKnown RBP7.3□□□□□ -1.24
HLA-B-254ENST00000497377 KRTAP9-3Q9BYQ3 159 aa7.3□□□□□ -1.24
HLA-B-254ENST00000497377 CST9LQ9H4G1 147 aa7.3□□□□□ -1.24
HLA-B-254ENST00000497377 MRPL35Q9NZE8 188 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms