RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 A6NDX4 124 aa9.22□□□□□ -0.93
VEGFA-215ENST00000497139 CCL18P55774 89 aa9.22□□□□□ -0.93
VEGFA-215ENST00000497139 MED13LQ71F56 2210 aa9.22□□□□□ -0.93
VEGFA-215ENST00000497139 CCL21O00585 134 aa9.22□□□□□ -0.93
VEGFA-215ENST00000497139 FAM19A1Q7Z5A9 133 aa9.22□□□□□ -0.93
VEGFA-215ENST00000497139 TRBV10-1A0A0K0K1A3 114 aa9.21□□□□□ -0.93
VEGFA-215ENST00000497139 TMEM89A2RUT3 159 aa9.21□□□□□ -0.94
VEGFA-215ENST00000497139 TMEM86BQ8N661 226 aa9.21□□□□□ -0.94
VEGFA-215ENST00000497139 CACNA1AO00555 2505 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 COL6A6A6NMZ7 2263 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 TRBV6-4A0A1B0GX49 114 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 LINC00158P58513 81 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 C11orf72Q8NBR9 251 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 ADGRG4Q8IZF6 3080 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 CSMD1Q96PZ7 3565 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 HTN1P15515 57 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 Q96MF0 132 aa9.2□□□□□ -0.94
VEGFA-215ENST00000497139 ADORA2A-AS1P86434 159 aa9.19□□□□□ -0.94
VEGFA-215ENST00000497139 K7EQD1 137 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 CACNA1BQ00975 2339 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 A0A1W2PRX2 142 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 SLPIP03973 132 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 DOPEY2Q9Y3R5 2298 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 BLCAPP62952 87 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 CDSNQ15517 529 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 FP248Q71RG6 208 aaPredicted RBP9.18□□□□□ -0.94
VEGFA-215ENST00000497139 LINC00482Q8N8I6 264 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 WFDC9Q8NEX5 89 aa9.18□□□□□ -0.94
VEGFA-215ENST00000497139 ACACBO00763 2458 aa9.17□□□□□ -0.94
VEGFA-215ENST00000497139 ANKHD1Q8IWZ3 2542 aaKnown RBP9.17□□□□□ -0.94
VEGFA-215ENST00000497139 RPL35AP18077 110 aaKnown RBP9.17□□□□□ -0.94
VEGFA-215ENST00000497139 Q8N814 137 aa9.17□□□□□ -0.94
VEGFA-215ENST00000497139 PAX4O43316 350 aa9.16□□□□□ -0.94
VEGFA-215ENST00000497139 LY6EQ16553 131 aa9.16□□□□□ -0.94
VEGFA-215ENST00000497139 H3BUX3 64 aa9.16□□□□□ -0.94
VEGFA-215ENST00000497139 NTM-AS1Q6ZSK4 140 aa9.15□□□□□ -0.94
VEGFA-215ENST00000497139 BPESC1Q9GZL8 116 aa9.15□□□□□ -0.94
VEGFA-215ENST00000497139 PKD1L2Q7Z442 2459 aa9.15□□□□□ -0.94
VEGFA-215ENST00000497139 UBE2L6O14933 153 aa9.15□□□□□ -0.95
VEGFA-215ENST00000497139 LOC110117498A0A087WWA1 95 aa9.14□□□□□ -0.95
VEGFA-215ENST00000497139 BRD3OSQ6XYD6 125 aa9.14□□□□□ -0.95
VEGFA-215ENST00000497139 CXCL6P80162 114 aa9.13□□□□□ -0.95
VEGFA-215ENST00000497139 DCHS2Q6V1P9 2916 aa9.13□□□□□ -0.95
VEGFA-215ENST00000497139 INSP01308 110 aa9.13□□□□□ -0.95
VEGFA-215ENST00000497139 F8WEM9 126 aa9.12□□□□□ -0.95
VEGFA-215ENST00000497139 TOMM7Q9P0U1 55 aa9.12□□□□□ -0.95
VEGFA-215ENST00000497139 RELNP78509 3460 aa9.12□□□□□ -0.95
VEGFA-215ENST00000497139 TRBV7-6A0A0J9YX20 115 aa9.12□□□□□ -0.95
VEGFA-215ENST00000497139 DEFB131AP59861 70 aa9.12□□□□□ -0.95
VEGFA-215ENST00000497139 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
VEGFA-215ENST00000497139 Q6ZQT0 140 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 V9GYY9 64 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 A0A087WZ39 114 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 PDE6GP18545 87 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 C11orf44Q8N8P7 122 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 IL17DQ8TAD2 202 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 H3BQ85 93 aa9.11□□□□□ -0.95
VEGFA-215ENST00000497139 LINC01547P58512 204 aaPredicted RBP9.11□□□□□ -0.95
VEGFA-215ENST00000497139 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
VEGFA-215ENST00000497139 ERC2-IT1O76042 136 aa9.1□□□□□ -0.95
VEGFA-215ENST00000497139 RBM3P98179 157 aaKnown RBP9.1□□□□□ -0.95
VEGFA-215ENST00000497139 PRM2P04554 102 aa9.1□□□□□ -0.95
VEGFA-215ENST00000497139 C1orf195Q5TG92 126 aa9.1□□□□□ -0.95
VEGFA-215ENST00000497139 RMI2Q96E14 147 aa9.09□□□□□ -0.95
VEGFA-215ENST00000497139 ZNF561-AS1K7EIQ3 104 aa9.09□□□□□ -0.95
VEGFA-215ENST00000497139 AVPP01185 164 aa9.09□□□□□ -0.95
VEGFA-215ENST00000497139 WFDC11Q8NEX6 87 aa9.09□□□□□ -0.95
VEGFA-215ENST00000497139 IGHV4-38-2P0DP08 117 aa9.08□□□□□ -0.96
VEGFA-215ENST00000497139 LRBAP50851 2863 aa9.08□□□□□ -0.96
VEGFA-215ENST00000497139 C6orf223Q8N319 242 aa9.08□□□□□ -0.96
VEGFA-215ENST00000497139 SNURFQ9Y675 71 aa9.08□□□□□ -0.96
VEGFA-215ENST00000497139 TRBV7-4A0A0J9YYF1 115 aa9.07□□□□□ -0.96
VEGFA-215ENST00000497139 NANOS2P60321 138 aaKnown RBP9.07□□□□□ -0.96
VEGFA-215ENST00000497139 A0A096LNT2 108 aa9.07□□□□□ -0.96
VEGFA-215ENST00000497139 A0A1W2PPR1 153 aa9.07□□□□□ -0.96
VEGFA-215ENST00000497139 SEC61GP60059 68 aa9.07□□□□□ -0.96
VEGFA-215ENST00000497139 SPTBN1Q01082 2364 aaKnown RBP9.07□□□□□ -0.96
VEGFA-215ENST00000497139 ZFYVE26Q68DK2 2539 aa9.07□□□□□ -0.96
VEGFA-215ENST00000497139 MIFP14174 115 aa9.06□□□□□ -0.96
VEGFA-215ENST00000497139 Q6ZVQ6 151 aa9.06□□□□□ -0.96
VEGFA-215ENST00000497139 TRAV10A0A0B4J240 114 aa9.06□□□□□ -0.96
VEGFA-215ENST00000497139 C9orf66Q5T8R8 295 aa9.06□□□□□ -0.96
VEGFA-215ENST00000497139 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
VEGFA-215ENST00000497139 TRGV1A0A0A0MS02 117 aa9.05□□□□□ -0.96
VEGFA-215ENST00000497139 Q6ZTI0 123 aa9.05□□□□□ -0.96
VEGFA-215ENST00000497139 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
VEGFA-215ENST00000497139 HAMPP81172 84 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 C6orf226Q5I0X4 101 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 Q8IZM0 81 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 MAP6D1Q9H9H5 199 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 HIVEP3Q5T1R4 2406 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 LINC00575Q6W349 94 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 LINC00474Q9P2X8 69 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 USP24Q9UPU5 2620 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 HRNRQ86YZ3 2850 aaPredicted RBP9.03□□□□□ -0.96
VEGFA-215ENST00000497139 COX17Q14061 63 aa9.03□□□□□ -0.96
VEGFA-215ENST00000497139 Q8N3U1 123 aa9.02□□□□□ -0.97
VEGFA-215ENST00000497139 EPG5Q9HCE0 2579 aa9.01□□□□□ -0.97
VEGFA-215ENST00000497139 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms