RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CDC42SE2Q9NRR3 84 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 UBE2D4Q9Y2X8 147 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 ORAOV1Q8WV07 137 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 LINC00959A0A1B0GUT2 108 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 A0A1B0GV90 55 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 C5orf38Q86SI9 138 aa5.91□□□□□ -1.46
U2AF1-212ENST00000496462 PRSS29PA6NIE9 313 aa5.9□□□□□ -1.47
U2AF1-212ENST00000496462 IGKCP01834 107 aa5.9□□□□□ -1.47
U2AF1-212ENST00000496462 SPAG11BQ08648 103 aa5.9□□□□□ -1.47
U2AF1-212ENST00000496462 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.47
U2AF1-212ENST00000496462 NTN5Q8WTR8 489 aaPredicted RBP5.9□□□□□ -1.47
U2AF1-212ENST00000496462 F8VRH5 84 aa5.89□□□□□ -1.47
U2AF1-212ENST00000496462 IGLV4-3A0A075B6K6 122 aa5.89□□□□□ -1.47
U2AF1-212ENST00000496462 TRAV12-1A0A0B4J245 112 aa5.89□□□□□ -1.47
U2AF1-212ENST00000496462 LINC00694P0DN24 101 aa5.89□□□□□ -1.47
U2AF1-212ENST00000496462 NTM-AS1Q6ZSK4 140 aa5.89□□□□□ -1.47
U2AF1-212ENST00000496462 HUWE1Q7Z6Z7 4374 aaKnown RBP5.89□□□□□ -1.47
U2AF1-212ENST00000496462 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
U2AF1-212ENST00000496462 MYMXA0A1B0GTQ4 84 aa5.88□□□□□ -1.47
U2AF1-212ENST00000496462 CST9LQ9H4G1 147 aa5.88□□□□□ -1.47
U2AF1-212ENST00000496462 IGLV5-52A0A0A0MRZ9 124 aa5.88□□□□□ -1.47
U2AF1-212ENST00000496462 TINCRA0A1B0GVN0 87 aa5.88□□□□□ -1.47
U2AF1-212ENST00000496462 OR10D4PQ8NGN7 298 aa5.88□□□□□ -1.47
U2AF1-212ENST00000496462 PGPEP1Q9NXJ5 209 aa5.88□□□□□ -1.47
U2AF1-212ENST00000496462 C5orf52A6NGY3 159 aa5.87□□□□□ -1.47
U2AF1-212ENST00000496462 LINC01561Q8N1V8 128 aa5.87□□□□□ -1.47
U2AF1-212ENST00000496462 IGLV4-60A0A075B6I1 120 aa5.87□□□□□ -1.47
U2AF1-212ENST00000496462 LINC00474Q9P2X8 69 aa5.87□□□□□ -1.47
U2AF1-212ENST00000496462 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
U2AF1-212ENST00000496462 BAALCQ8WXS3 180 aa5.87□□□□□ -1.47
U2AF1-212ENST00000496462 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
U2AF1-212ENST00000496462 GAS8-AS1O95177 125 aa5.86□□□□□ -1.47
U2AF1-212ENST00000496462 SYCNQ0VAF6 134 aa5.86□□□□□ -1.47
U2AF1-212ENST00000496462 C14orf144Q96I85 54 aa5.86□□□□□ -1.47
U2AF1-212ENST00000496462 USP17L23D6RBM5 183 aa5.86□□□□□ -1.47
U2AF1-212ENST00000496462 CARD19Q96LW7 228 aa5.86□□□□□ -1.47
U2AF1-212ENST00000496462 IGLV4-69A0A075B6H9 119 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 SNCGO76070 127 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 HERV-K104P63124 156 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.85□□□□□ -1.47
U2AF1-212ENST00000496462 IGHV3-64A0A075B6Q5 118 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 COX7B2Q8TF08 81 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 LINC00158P58513 81 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 YPEL4Q96NS1 127 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 VAMP8Q9BV40 100 aa5.85□□□□□ -1.47
U2AF1-212ENST00000496462 NMUP48645 174 aa5.84□□□□□ -1.47
U2AF1-212ENST00000496462 COA6Q5JTJ3 125 aaKnown RBP5.84□□□□□ -1.47
U2AF1-212ENST00000496462 HIGD2BQ4VC39 106 aa5.84□□□□□ -1.47
U2AF1-212ENST00000496462 Q9UF83 564 aa5.84□□□□□ -1.47
U2AF1-212ENST00000496462 SMIM6P0DI80 62 aa5.84□□□□□ -1.47
U2AF1-212ENST00000496462 ZNF575Q86XF7 245 aa5.84□□□□□ -1.47
U2AF1-212ENST00000496462 C2orf48Q96LS8 159 aa5.84□□□□□ -1.47
U2AF1-212ENST00000496462 MRPL35Q9NZE8 188 aaKnown RBP5.84□□□□□ -1.47
U2AF1-212ENST00000496462 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
U2AF1-212ENST00000496462 OPRPNQ99935 248 aaPredicted RBP5.83□□□□□ -1.48
U2AF1-212ENST00000496462 UBE2D1P51668 147 aa5.83□□□□□ -1.48
U2AF1-212ENST00000496462 PRR34Q9NV39 138 aa5.83□□□□□ -1.48
U2AF1-212ENST00000496462 LECT2O14960 151 aa5.83□□□□□ -1.48
U2AF1-212ENST00000496462 PYY3Q5JQD4 70 aa5.83□□□□□ -1.48
U2AF1-212ENST00000496462 LOC107984640A0A0U1RRK4 108 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 SPINK8P0C7L1 97 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 RPL18AQ02543 176 aaKnown RBP5.82□□□□□ -1.48
U2AF1-212ENST00000496462 C16orf90A8MZG2 172 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 HINT1P49773 126 aaPredicted RBP5.82□□□□□ -1.48
U2AF1-212ENST00000496462 RPL24P83731 157 aaKnown RBP5.82□□□□□ -1.48
U2AF1-212ENST00000496462 SRSF9Q13242 221 aaKnown RBP eCLIP5.82□□□□□ -1.48
U2AF1-212ENST00000496462 ZC2HC1BQ5TFG8 222 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 AMELXQ99217 191 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 C11orf86A6NJI1 115 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 ENHOQ6UWT2 76 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 A0A087WZ39 114 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 LINC01546A6NGU7 62 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 IGLC3P0DOY3 106 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 NKAPP1Q8N9T2 125 aa5.82□□□□□ -1.48
U2AF1-212ENST00000496462 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
U2AF1-212ENST00000496462 C3orf79P0CE67 100 aa5.81□□□□□ -1.48
U2AF1-212ENST00000496462 GAGE2BQ13066 116 aa5.81□□□□□ -1.48
U2AF1-212ENST00000496462 JOSD1Q15040 202 aaPredicted RBP5.81□□□□□ -1.48
U2AF1-212ENST00000496462 C7orf33Q8WU49 177 aa5.81□□□□□ -1.48
U2AF1-212ENST00000496462 NDUFA12Q9UI09 145 aa5.81□□□□□ -1.48
U2AF1-212ENST00000496462 Q8IZM0 81 aa5.81□□□□□ -1.48
U2AF1-212ENST00000496462 A0A087WTM6 91 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 TMEM238C9JI98 176 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 LEPROTO15243 131 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 LINC00242Q5T6M2 205 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 HIST3H2BBQ8N257 126 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 TRBV30A0A0K0K1B3 111 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 CDKN2A-AS1Q9UH64 79 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 SPATA12Q7Z6I5 190 aa5.8□□□□□ -1.48
U2AF1-212ENST00000496462 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
U2AF1-212ENST00000496462 Q6ZR54 194 aa5.79□□□□□ -1.48
U2AF1-212ENST00000496462 J3QQQ9 107 aa5.79□□□□□ -1.48
U2AF1-212ENST00000496462 LBHQ53QV2 105 aaPredicted RBP5.79□□□□□ -1.48
U2AF1-212ENST00000496462 HIST1H2BLQ99880 126 aa5.79□□□□□ -1.48
U2AF1-212ENST00000496462 UBE2BP63146 152 aa5.78□□□□□ -1.48
U2AF1-212ENST00000496462 RTL8CO15255 209 aa5.78□□□□□ -1.48
U2AF1-212ENST00000496462 PFN2P35080 140 aa5.78□□□□□ -1.48
U2AF1-212ENST00000496462 TSTD3H0UI37 97 aa5.77□□□□□ -1.49
U2AF1-212ENST00000496462 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms