RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 IGHV3OR16-13A0A075B7E8 117 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 IGHV3-74A0A0B4J1X5 117 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 H0YGX0 51 aa6.6□□□□□ -1.35
HPS4-217ENST00000496385 WNK2Q9Y3S1 2297 aa6.59□□□□□ -1.35
HPS4-217ENST00000496385 FAM223BA6NKX1 122 aa6.59□□□□□ -1.35
HPS4-217ENST00000496385 PRB3Q04118 309 aaPredicted RBP6.59□□□□□ -1.35
HPS4-217ENST00000496385 Q8N9W7 124 aa6.59□□□□□ -1.35
HPS4-217ENST00000496385 RS1O15537 224 aa6.59□□□□□ -1.35
HPS4-217ENST00000496385 GHRHP01286 108 aa6.59□□□□□ -1.35
HPS4-217ENST00000496385 DEFB104AQ8WTQ1 72 aa6.59□□□□□ -1.35
HPS4-217ENST00000496385 NIPBLQ6KC79 2804 aaeCLIP6.59□□□□□ -1.35
HPS4-217ENST00000496385 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 KNCNA6PVL3 124 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 FAM74A4Q5TZK3 123 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 FAM218AQ96MZ4 157 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 V9GYY9 64 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 A0A087WVE0 104 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 IGHV3-49A0A0A0MS15 119 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 IGHV3-16A0A0C4DH30 117 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 RPL35AP18077 110 aaKnown RBP6.58□□□□□ -1.36
HPS4-217ENST00000496385 XCL1P47992 114 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 SEC61GP60059 68 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 LYPD5Q6UWN5 251 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 XCL2Q9UBD3 114 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 ZFHX3Q15911 3703 aa6.58□□□□□ -1.36
HPS4-217ENST00000496385 NDUFA4O00483 81 aa6.57□□□□□ -1.36
HPS4-217ENST00000496385 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
HPS4-217ENST00000496385 A0A096LNT2 108 aa6.57□□□□□ -1.36
HPS4-217ENST00000496385 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
HPS4-217ENST00000496385 C16orf95Q9H693 158 aa6.57□□□□□ -1.36
HPS4-217ENST00000496385 CCKP06307 115 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 ECSCRQ19T08 205 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 FAM19A3Q7Z5A8 133 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 SETD2Q9BYW2 2564 aaPredicted RBP6.56□□□□□ -1.36
HPS4-217ENST00000496385 C14orf132Q9NPU4 83 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 A8MZ25 164 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 H7BZZ5 65 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 TRBV12-3P01733 135 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 DSCR9P59020 149 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 LMO4P61968 165 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 KLKP1Q107X0 134 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 Q9H8V8 135 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 CUBNO60494 3623 aa6.56□□□□□ -1.36
HPS4-217ENST00000496385 ATP6V0E1O15342 81 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 NDUFC1O43677 76 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.55□□□□□ -1.363e-7■■■■□ 19.5
HPS4-217ENST00000496385 MXRA5Q9NR99 2828 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 ZFP36P26651 326 aaKnown RBP6.55□□□□□ -1.36
HPS4-217ENST00000496385 C20orf197Q8N268 126 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 Q9HAA7 133 aa6.55□□□□□ -1.36
HPS4-217ENST00000496385 CRPP02741 224 aa6.54□□□□□ -1.36
HPS4-217ENST00000496385 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
HPS4-217ENST00000496385 LY6G6DO95868 133 aa6.54□□□□□ -1.36
HPS4-217ENST00000496385 IGHV4-31P0DP07 118 aa6.54□□□□□ -1.36
HPS4-217ENST00000496385 C1orf195Q5TG92 126 aa6.54□□□□□ -1.36
HPS4-217ENST00000496385 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
HPS4-217ENST00000496385 HIVEP2P31629 2446 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 PIK3CD-AS1Q5SR53 167 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 IGHV1OR15-1A0A075B7D0 117 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 F6UB75 175 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 KRTAP1-1Q07627 177 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 ZNF625Q96I27 306 aaPredicted RBP6.53□□□□□ -1.36
HPS4-217ENST00000496385 PKIGQ9Y2B9 76 aa6.53□□□□□ -1.36
HPS4-217ENST00000496385 FN1P02751 2386 aaKnown RBP6.52□□□□□ -1.37
HPS4-217ENST00000496385 NF1P21359 2839 aa6.52□□□□□ -1.37
HPS4-217ENST00000496385 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
HPS4-217ENST00000496385 MSMBP08118 114 aa6.51□□□□□ -1.37
HPS4-217ENST00000496385 JMJD1CQ15652 2540 aa6.51□□□□□ -1.37
HPS4-217ENST00000496385 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
HPS4-217ENST00000496385 INAFM1C9JVW0 142 aa6.51□□□□□ -1.37
HPS4-217ENST00000496385 DEFB1P60022 68 aa6.51□□□□□ -1.37
HPS4-217ENST00000496385 B4DSR2 109 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 G3V318 75 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 LINC01356Q8N9X3 169 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 UBL5Q9BZL1 73 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 ORMDL1Q9P0S3 153 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 A0A087WYN8 130 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 AVPP01185 164 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 C19orf54Q5BKX5 351 aa6.5□□□□□ -1.37
HPS4-217ENST00000496385 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
HPS4-217ENST00000496385 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
HPS4-217ENST00000496385 SMIM1B2RUZ4 78 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
HPS4-217ENST00000496385 UNQ9165/PRO28630Q6UXU0 137 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 USMG5Q96IX5 58 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 H3BUA1 57 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 HILS1P60008 231 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 CFHR3Q02985 330 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 SMIM11BQ8TCY0 68 aa6.49□□□□□ -1.37
HPS4-217ENST00000496385 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 LINC00242Q5T6M2 205 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 DGAT2L7PQ6IED9 249 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 LINC00167Q96N53 147 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 RHPN1-AS1Q9BWJ2 59 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 K7EMT4 169 aa6.48□□□□□ -1.37
HPS4-217ENST00000496385 LINC00337Q8N6G1 96 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms