RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
PDAP1-204ENST00000496335 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.94
PDAP1-204ENST00000496335 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
PDAP1-204ENST00000496335 Q6ZRU5 148 aa9.15□□□□□ -0.94
PDAP1-204ENST00000496335 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.94
PDAP1-204ENST00000496335 IGHV3OR16-9A0A0B4J2B5 98 aa9.14□□□□□ -0.95
PDAP1-204ENST00000496335 C2orf66Q6UXQ4 117 aa9.14□□□□□ -0.95
PDAP1-204ENST00000496335 STPG4Q8N801 248 aa9.14□□□□□ -0.95
PDAP1-204ENST00000496335 CAMK2N2Q96S95 79 aa9.14□□□□□ -0.95
PDAP1-204ENST00000496335 TRAV9-1A0A075B6T8 112 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 J3QL48 77 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 APOMO95445 188 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 S100PP25815 95 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 SPAG11BQ08648 103 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 C10orf91Q5T1B1 145 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 CYSLTR1Q9Y271 337 aa9.13□□□□□ -0.95
PDAP1-204ENST00000496335 FAT3Q8TDW7 4589 aa9.12□□□□□ -0.95
PDAP1-204ENST00000496335 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
PDAP1-204ENST00000496335 ORMDL2Q53FV1 153 aa9.12□□□□□ -0.95
PDAP1-204ENST00000496335 ORAOV1Q8WV07 137 aa9.12□□□□□ -0.95
PDAP1-204ENST00000496335 C2orf48Q96LS8 159 aa9.12□□□□□ -0.95
PDAP1-204ENST00000496335 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
PDAP1-204ENST00000496335 CARHSP1Q9Y2V2 147 aaKnown RBP9.12□□□□□ -0.95
PDAP1-204ENST00000496335 LINC00242Q5T6M2 205 aa9.11□□□□□ -0.95
PDAP1-204ENST00000496335 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
PDAP1-204ENST00000496335 OR10D4PQ8NGN7 298 aa9.11□□□□□ -0.95
PDAP1-204ENST00000496335 RPS10P5Q9NQ39 176 aa9.11□□□□□ -0.95
PDAP1-204ENST00000496335 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 A0A0J9YXV3 536 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 LOC107984640A0A0U1RRK4 108 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 K7EMI3 77 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 GAGE2BQ13066 116 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 LINC00173Q6ZV60 143 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 GNB1LQ9BYB4 327 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 PKIGQ9Y2B9 76 aa9.1□□□□□ -0.95
PDAP1-204ENST00000496335 IGIPA6NJ69 53 aa9.09□□□□□ -0.95
PDAP1-204ENST00000496335 UBE2D1P51668 147 aa9.09□□□□□ -0.95
PDAP1-204ENST00000496335 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
PDAP1-204ENST00000496335 RHEBQ15382 184 aa9.09□□□□□ -0.95
PDAP1-204ENST00000496335 A0A087WZ39 114 aa9.08□□□□□ -0.96
PDAP1-204ENST00000496335 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.08□□□□□ -0.96
PDAP1-204ENST00000496335 Q6ZN92 141 aa9.08□□□□□ -0.96
PDAP1-204ENST00000496335 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
PDAP1-204ENST00000496335 AMELXQ99217 191 aa9.08□□□□□ -0.96
PDAP1-204ENST00000496335 ALKBH7Q9BT30 221 aaPredicted RBP9.08□□□□□ -0.96
PDAP1-204ENST00000496335 VCX2Q9H322 139 aa9.08□□□□□ -0.96
PDAP1-204ENST00000496335 C10orf25Q5T742 122 aa9.07□□□□□ -0.96
PDAP1-204ENST00000496335 UNQ6190/PRO20217Q6UXQ8 127 aa9.07□□□□□ -0.96
PDAP1-204ENST00000496335 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
PDAP1-204ENST00000496335 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
PDAP1-204ENST00000496335 APOC3P02656 99 aa9.06□□□□□ -0.96
PDAP1-204ENST00000496335 RPL18AQ02543 176 aaKnown RBP9.06□□□□□ -0.96
PDAP1-204ENST00000496335 FABP9Q0Z7S8 132 aa9.06□□□□□ -0.96
PDAP1-204ENST00000496335 KIAA0087Q14695 138 aa9.06□□□□□ -0.96
PDAP1-204ENST00000496335 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
PDAP1-204ENST00000496335 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
PDAP1-204ENST00000496335 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
PDAP1-204ENST00000496335 NDUFA1O15239 70 aa9.05□□□□□ -0.96
PDAP1-204ENST00000496335 OXTP01178 125 aa9.05□□□□□ -0.96
PDAP1-204ENST00000496335 NPSP0C0P6 89 aa9.05□□□□□ -0.96
PDAP1-204ENST00000496335 COX19Q49B96 90 aa9.05□□□□□ -0.96
PDAP1-204ENST00000496335 MRPL35Q9NZE8 188 aaKnown RBP9.05□□□□□ -0.96
PDAP1-204ENST00000496335 F8WDY8 70 aa9.04□□□□□ -0.96
PDAP1-204ENST00000496335 MT-ND6P03923 174 aa9.04□□□□□ -0.96
PDAP1-204ENST00000496335 G0S2P27469 103 aa9.04□□□□□ -0.96
PDAP1-204ENST00000496335 TIMM17AQ99595 171 aa9.04□□□□□ -0.96
PDAP1-204ENST00000496335 C6orf48Q9UBA6 75 aa9.04□□□□□ -0.96
PDAP1-204ENST00000496335 PRR3P79522 188 aaKnown RBP9.03□□□□□ -0.96
PDAP1-204ENST00000496335 C2orf82Q6UX34 121 aa9.03□□□□□ -0.96
PDAP1-204ENST00000496335 ERASQ7Z444 233 aa9.03□□□□□ -0.96
PDAP1-204ENST00000496335 SCGB3A1Q96QR1 104 aa9.03□□□□□ -0.96
PDAP1-204ENST00000496335 LINC01546A6NGU7 62 aa9.02□□□□□ -0.97
PDAP1-204ENST00000496335 C9orf116Q5BN46 136 aaPredicted RBP9.02□□□□□ -0.97
PDAP1-204ENST00000496335 PAPPA-AS1Q5QFB9 102 aa9.02□□□□□ -0.97
PDAP1-204ENST00000496335 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
PDAP1-204ENST00000496335 Q6ZRP5 223 aa9.01□□□□□ -0.97
PDAP1-204ENST00000496335 FA2HQ7L5A8 372 aa9.01□□□□□ -0.97
PDAP1-204ENST00000496335 LINC01561Q8N1V8 128 aa9.01□□□□□ -0.97
PDAP1-204ENST00000496335 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
PDAP1-204ENST00000496335 SNAPINO95295 136 aa9□□□□□ -0.97
PDAP1-204ENST00000496335 NDUFA5Q16718 116 aa9□□□□□ -0.97
PDAP1-204ENST00000496335 SMCO4Q9NRQ5 59 aa9□□□□□ -0.97
PDAP1-204ENST00000496335 TOMM7Q9P0U1 55 aa9□□□□□ -0.97
PDAP1-204ENST00000496335 TRAPPC1Q9Y5R8 145 aa9□□□□□ -0.97
PDAP1-204ENST00000496335 HERVK_113P63121 156 aa8.99□□□□□ -0.97
PDAP1-204ENST00000496335 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
PDAP1-204ENST00000496335 SVBPQ8N300 66 aa8.99□□□□□ -0.97
PDAP1-204ENST00000496335 GEMIN7Q9H840 131 aaKnown RBP8.99□□□□□ -0.97
PDAP1-204ENST00000496335 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
PDAP1-204ENST00000496335 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
PDAP1-204ENST00000496335 TLX1NBP0CAT3 122 aa8.98□□□□□ -0.97
PDAP1-204ENST00000496335 SEC11AP67812 179 aa8.98□□□□□ -0.97
PDAP1-204ENST00000496335 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
PDAP1-204ENST00000496335 URB1-AS1Q96HZ7 61 aa8.98□□□□□ -0.97
PDAP1-204ENST00000496335 TRBV30A0A0K0K1B3 111 aa8.97□□□□□ -0.97
PDAP1-204ENST00000496335 LINC01549A6NIU2 74 aa8.97□□□□□ -0.97
PDAP1-204ENST00000496335 PRSS2P07478 247 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms