RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 URB1-AS1Q96HZ7 61 aa6.38□□□□□ -1.39
PRPF3-207ENST00000496202 HECTD4Q9Y4D8 3996 aa6.38□□□□□ -1.39
PRPF3-207ENST00000496202 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
PRPF3-207ENST00000496202 COX7A2LO14548 114 aa6.37□□□□□ -1.39
PRPF3-207ENST00000496202 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
PRPF3-207ENST00000496202 FOXI1Q12951 378 aa6.37□□□□□ -1.39
PRPF3-207ENST00000496202 FAM104AQ969W3 186 aa6.37□□□□□ -1.39
PRPF3-207ENST00000496202 FAT2Q9NYQ8 4349 aa6.37□□□□□ -1.39
PRPF3-207ENST00000496202 hDV102S1A0JD36 115 aa6.36□□□□□ -1.39
PRPF3-207ENST00000496202 SERF1AO75920 110 aa6.36□□□□□ -1.39
PRPF3-207ENST00000496202 ATP5LO75964 103 aa6.36□□□□□ -1.39
PRPF3-207ENST00000496202 ZC2HC1BQ5TFG8 222 aa6.36□□□□□ -1.39
PRPF3-207ENST00000496202 AMELXQ99217 191 aa6.36□□□□□ -1.39
PRPF3-207ENST00000496202 A0A096LNJ9 63 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 IGHV1-58A0A0C4DH39 117 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 APOMO95445 188 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 FUSP35637 526 aaKnown RBP eCLIP6.35□□□□□ -1.39
PRPF3-207ENST00000496202 UBE2D1P51668 147 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 NDUFA6P56556 154 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 SEC11AP67812 179 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 LINC00173Q6ZV60 143 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 C5orf38Q86SI9 138 aa6.35□□□□□ -1.39
PRPF3-207ENST00000496202 GEMIN7Q9H840 131 aaKnown RBP6.35□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BKO60814 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BJP06899 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 PRSS1P07477 247 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BOP23527 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BBP33778 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BDP58876 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BCP62807 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 PMVKQ15126 192 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST2H2BEQ16778 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 PDZD11Q5EBL8 140 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.34□□□□□ -1.39
PRPF3-207ENST00000496202 LINC00242Q5T6M2 205 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 FAM19A2Q8N3H0 131 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 C15orf56Q8N910 161 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BHQ93079 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BNQ99877 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 HIST1H2BMQ99879 126 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
PRPF3-207ENST00000496202 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.33□□□□□ -1.4
PRPF3-207ENST00000496202 GCSHP23434 173 aa6.33□□□□□ -1.4
PRPF3-207ENST00000496202 HERVK_113P63121 156 aa6.33□□□□□ -1.4
PRPF3-207ENST00000496202 IFI27L1Q96BM0 104 aa6.33□□□□□ -1.4
PRPF3-207ENST00000496202 CST9LQ9H4G1 147 aa6.33□□□□□ -1.4
PRPF3-207ENST00000496202 GVQW2A0A096LPI5 108 aaPredicted RBP6.32□□□□□ -1.4
PRPF3-207ENST00000496202 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
PRPF3-207ENST00000496202 A0A0J9YXV3 536 aa6.32□□□□□ -1.4
PRPF3-207ENST00000496202 LEPROTL1O95214 131 aa6.32□□□□□ -1.4
PRPF3-207ENST00000496202 LINC00310P59036 64 aa6.32□□□□□ -1.4
PRPF3-207ENST00000496202 LINC00469Q8N7U9 141 aa6.32□□□□□ -1.4
PRPF3-207ENST00000496202 ORAOV1Q8WV07 137 aa6.32□□□□□ -1.4
PRPF3-207ENST00000496202 A0A087WZ39 114 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 TINCRA0A1B0GVN0 87 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 GAGE10A6NGK3 116 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 COX6A2Q02221 97 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 SPAG11BQ08648 103 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 FAM19A3Q7Z5A8 133 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 PACRGQ96M98 296 aaPredicted RBP6.31□□□□□ -1.4
PRPF3-207ENST00000496202 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 PKD1P98161 4303 aa6.31□□□□□ -1.4
PRPF3-207ENST00000496202 IGHV3-64A0A075B6Q5 118 aa6.3□□□□□ -1.4
PRPF3-207ENST00000496202 FABP4P15090 132 aa6.3□□□□□ -1.4
PRPF3-207ENST00000496202 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
PRPF3-207ENST00000496202 LINC00526Q96FQ7 95 aa6.3□□□□□ -1.4
PRPF3-207ENST00000496202 CHAC1Q9BUX1 264 aa6.3□□□□□ -1.4
PRPF3-207ENST00000496202 IGLV4-69A0A075B6H9 119 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 H0Y8G0 127 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 H3BRM9 83 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 NUPR1O60356 82 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 PRSS2P07478 247 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 LINC01561Q8N1V8 128 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 CARD19Q96LW7 228 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 CAMK2N2Q96S95 79 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
PRPF3-207ENST00000496202 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
PRPF3-207ENST00000496202 TRAV12-1A0A0B4J245 112 aa6.28□□□□□ -1.4
PRPF3-207ENST00000496202 IGLC3P0DOY3 106 aa6.28□□□□□ -1.4
PRPF3-207ENST00000496202 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
PRPF3-207ENST00000496202 SYCNQ0VAF6 134 aa6.28□□□□□ -1.4
PRPF3-207ENST00000496202 TOMM7Q9P0U1 55 aa6.28□□□□□ -1.4
PRPF3-207ENST00000496202 PKIGQ9Y2B9 76 aa6.28□□□□□ -1.4
PRPF3-207ENST00000496202 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 B5MCH6 92 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 NDUFA1O15239 70 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 COA6Q5JTJ3 125 aaKnown RBP6.27□□□□□ -1.41
PRPF3-207ENST00000496202 C9orf163Q8N9P6 203 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 EPPK1P58107 5090 aaKnown RBP6.27□□□□□ -1.41
PRPF3-207ENST00000496202 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
PRPF3-207ENST00000496202 F8WDY8 70 aa6.26□□□□□ -1.41
PRPF3-207ENST00000496202 S100A6P06703 90 aa6.26□□□□□ -1.41
PRPF3-207ENST00000496202 SPINK8P0C7L1 97 aa6.26□□□□□ -1.41
PRPF3-207ENST00000496202 C6orf226Q5I0X4 101 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 229.2 ms