RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 TEX48A0A1B0GUV7 120 aa9.62□□□□□ -0.87
TFE3-205ENST00000495940 TSPAN13O95857 204 aa9.62□□□□□ -0.87
TFE3-205ENST00000495940 IFITM1P13164 125 aa9.62□□□□□ -0.87
TFE3-205ENST00000495940 TIRAPP58753 221 aa9.62□□□□□ -0.87
TFE3-205ENST00000495940 SIGMAR1Q99720 223 aa9.62□□□□□ -0.87
TFE3-205ENST00000495940 MAP6D1Q9H9H5 199 aa9.62□□□□□ -0.87
TFE3-205ENST00000495940 IGHV1-58A0A0C4DH39 117 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 DEFB4AO15263 64 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 CFAP126Q5VTH2 177 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 LINC01600Q96MT4 127 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 LINC01587Q99440 93 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
TFE3-205ENST00000495940 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
TFE3-205ENST00000495940 WFDC2Q14508 124 aa9.6□□□□□ -0.87
TFE3-205ENST00000495940 C11orf72Q8NBR9 251 aa9.6□□□□□ -0.87
TFE3-205ENST00000495940 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
TFE3-205ENST00000495940 C11orf68Q9H3H3 251 aaKnown RBP9.6□□□□□ -0.87
TFE3-205ENST00000495940 ERG28Q9UKR5 140 aa9.6□□□□□ -0.87
TFE3-205ENST00000495940 CSDC2Q9Y534 153 aaKnown RBP9.6□□□□□ -0.87
TFE3-205ENST00000495940 CFC1BP0CG36 223 aa9.59□□□□□ -0.87
TFE3-205ENST00000495940 CFC1P0CG37 223 aa9.59□□□□□ -0.87
TFE3-205ENST00000495940 ODF3L2Q3SX64 289 aa9.59□□□□□ -0.87
TFE3-205ENST00000495940 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
TFE3-205ENST00000495940 KIR2DL5BQ8NHK3 375 aa9.59□□□□□ -0.87
TFE3-205ENST00000495940 IGLV5-45A0A087WSX0 123 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 LOC107984156A0A0G2JMH3 177 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 A0A0J9YXV3 536 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 APOMO95445 188 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 DAZ2Q13117 558 aaKnown RBP9.58□□□□□ -0.88
TFE3-205ENST00000495940 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
TFE3-205ENST00000495940 ARL17AQ8IVW1 177 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
TFE3-205ENST00000495940 UBE2D4Q9Y2X8 147 aa9.58□□□□□ -0.88
TFE3-205ENST00000495940 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 TMEM262E9PQX1 116 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 H7C423 109 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 RBMY1A1P0DJD3 496 aaKnown RBP9.57□□□□□ -0.88
TFE3-205ENST00000495940 RBMY1CP0DJD4 496 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 IGHV3-30-3P0DP02 117 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 PSMB2P49721 201 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 CIRBPQ14011 172 aaKnown RBP9.57□□□□□ -0.88
TFE3-205ENST00000495940 RBMY1FQ15415 496 aaKnown RBP9.57□□□□□ -0.88
TFE3-205ENST00000495940 ETDBQ3ZM63 59 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 TEN1Q86WV5 123 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 STHQ8IWL8 128 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 CHCHD7Q9BUK0 85 aa9.57□□□□□ -0.88
TFE3-205ENST00000495940 GEMIN7Q9H840 131 aaKnown RBP9.57□□□□□ -0.88
TFE3-205ENST00000495940 TRBV30A0A0K0K1B3 111 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 CDK2AP2O75956 126 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 IGHV3-33P01772 117 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 SCGB1C2P0DMR2 95 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 EMP1P54849 157 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 HERVK_113P63121 156 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 FOXI1Q12951 378 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 TMEM263Q8WUH6 116 aaKnown RBP9.56□□□□□ -0.88
TFE3-205ENST00000495940 VSIG2Q96IQ7 327 aa9.56□□□□□ -0.88
TFE3-205ENST00000495940 A4D1N5 150 aa9.55□□□□□ -0.88
TFE3-205ENST00000495940 COX6CP09669 75 aa9.55□□□□□ -0.88
TFE3-205ENST00000495940 RPL36AP83881 106 aaKnown RBP9.55□□□□□ -0.88
TFE3-205ENST00000495940 ATXN8Q156A1 80 aa9.55□□□□□ -0.88
TFE3-205ENST00000495940 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
TFE3-205ENST00000495940 Q8N1X5 172 aa9.55□□□□□ -0.88
TFE3-205ENST00000495940 RPL36ALQ969Q0 106 aaKnown RBP9.55□□□□□ -0.88
TFE3-205ENST00000495940 DMBT1Q9UGM3 2413 aaPredicted RBP9.54□□□□□ -0.88
TFE3-205ENST00000495940 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
TFE3-205ENST00000495940 C16orf90A8MZG2 172 aa9.54□□□□□ -0.88
TFE3-205ENST00000495940 MTURNQ8N3F0 131 aa9.54□□□□□ -0.88
TFE3-205ENST00000495940 NDUFA12Q9UI09 145 aa9.54□□□□□ -0.88
TFE3-205ENST00000495940 NDUFA1O15239 70 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 MIAQ16674 131 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 C21orf62-AS1Q17RA5 79 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 Q6ZTC4 211 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 MUSTN1Q8IVN3 82 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 GTSF1LQ9H1H1 148 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 DNAH5Q8TE73 4624 aa9.53□□□□□ -0.88
TFE3-205ENST00000495940 HTN1P15515 57 aa9.52□□□□□ -0.89
TFE3-205ENST00000495940 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
TFE3-205ENST00000495940 TCL1BO95988 128 aa9.51□□□□□ -0.89
TFE3-205ENST00000495940 AZU1P20160 251 aa9.51□□□□□ -0.89
TFE3-205ENST00000495940 HERV-K104P63124 156 aa9.51□□□□□ -0.89
TFE3-205ENST00000495940 FAM104AQ969W3 186 aa9.51□□□□□ -0.89
TFE3-205ENST00000495940 C16orf74Q96GX8 76 aa9.51□□□□□ -0.89
TFE3-205ENST00000495940 TRAV10A0A0B4J240 114 aa9.5□□□□□ -0.89
TFE3-205ENST00000495940 K7EQD1 137 aa9.5□□□□□ -0.89
TFE3-205ENST00000495940 SH2D6Q7Z4S9 175 aa9.5□□□□□ -0.89
TFE3-205ENST00000495940 Q8NAQ8 132 aa9.5□□□□□ -0.89
TFE3-205ENST00000495940 LITAFQ99732 161 aa9.5□□□□□ -0.89
TFE3-205ENST00000495940 IGLV5-39A0A0G2JS06 123 aa9.49□□□□□ -0.89
TFE3-205ENST00000495940 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
TFE3-205ENST00000495940 Q6ZR54 194 aa9.49□□□□□ -0.89
TFE3-205ENST00000495940 NACAE9PAV3 2078 aa9.49□□□□□ -0.89
TFE3-205ENST00000495940 IGHV3-73A0A0B4J1V6 119 aa9.48□□□□□ -0.89
TFE3-205ENST00000495940 SMCPP49901 116 aaPredicted RBP9.48□□□□□ -0.89
TFE3-205ENST00000495940 Q1RN00 199 aa9.48□□□□□ -0.89
TFE3-205ENST00000495940 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
TFE3-205ENST00000495940 TMEM101Q96IK0 257 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms