RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 C15orf53Q8NAA6 179 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 NHP2Q9NX24 153 aaKnown RBP1.58□□□□□ -2.16
SMC4-224ENST00000494612 TAS2R4Q9NYW5 299 aa1.58□□□□□ -2.16
SMC4-224ENST00000494612 TRBV7-1A0A0A6YYK4 115 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 NBDYA0A0U1RRE5 68 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 A0A1B0GW64 132 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 J3QLW9 94 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 CD2P06729 351 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 GPX1P07203 203 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 CXCL1P09341 107 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 NBEAP1P0C6P0 100 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 SNRPGP62308 76 aaKnown RBP1.57□□□□□ -2.16
SMC4-224ENST00000494612 SURF2Q15527 256 aaPredicted RBP1.57□□□□□ -2.16
SMC4-224ENST00000494612 HMGN3Q15651 99 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 MSMO1Q15800 293 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 VMA21Q3ZAQ7 101 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 RNASE10Q5GAN6 216 aaKnown RBP1.57□□□□□ -2.16
SMC4-224ENST00000494612 IDO2Q6ZQW0 420 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 TTC9CQ8N5M4 171 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 OR5AK2Q8NH90 309 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 SLC25A21Q9BQT8 299 aaPredicted RBP1.57□□□□□ -2.16
SMC4-224ENST00000494612 SLC50A1Q9BRV3 221 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 TMEM126AQ9H061 195 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 BANF2Q9H503 90 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 TMEM138Q9NPI0 162 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 TMEM14BQ9NUH8 114 aa1.57□□□□□ -2.16
SMC4-224ENST00000494612 TRAV1-1A0A0B4J248 108 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 LOC105371267A0A1B0GV96 52 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 OR2T8A6NH00 312 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 TIMM17BO60830 172 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 SMR3BP02814 79 aaPredicted RBP1.56□□□□□ -2.16
SMC4-224ENST00000494612 ZNF705BP0CI00 300 aaPredicted RBP1.56□□□□□ -2.16
SMC4-224ENST00000494612 SPART-AS1P0CW21 52 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 HIST1H1BP16401 226 aaKnown RBP1.56□□□□□ -2.16
SMC4-224ENST00000494612 DEFB131AP59861 70 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 SPANXN5Q5MJ07 72 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 C10orf55Q5SWW7 151 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 GLIPR1L1Q6UWM5 242 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 Q6ZRN7 208 aaPredicted RBP1.56□□□□□ -2.16
SMC4-224ENST00000494612 DEFB107AQ8IZN7 70 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 C9orf163Q8N9P6 203 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.56□□□□□ -2.16
SMC4-224ENST00000494612 CARD19Q96LW7 228 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 LAMTOR2Q9Y2Q5 125 aa1.56□□□□□ -2.16
SMC4-224ENST00000494612 DMBT1Q9UGM3 2413 aaPredicted RBP1.56□□□□□ -2.16
SMC4-224ENST00000494612 TMEM189A5PLL7 270 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 NDUFA4O00483 81 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 CST7O76096 145 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 CRPP02741 224 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 SAA1P0DJI8 122 aaPredicted RBP1.55□□□□□ -2.16
SMC4-224ENST00000494612 BCL2P10415 239 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 S100A11P31949 105 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 CCL18P55774 89 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 HAMPP81172 84 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 ZNF846Q147U1 533 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 ELOBQ15370 118 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 ESRGQ1W209 222 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 Q56UQ5 140 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 C12orf73Q69YU5 71 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 TOMM20LQ6UXN7 152 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 C6orf201Q7Z4U5 140 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 ACBD7Q8N6N7 88 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 OR2T35Q8NGX2 323 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 VSTM2AQ8TAG5 236 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 RHPN1-AS1Q9BWJ2 59 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 NAT8BQ9UHF3 227 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 RABAC1Q9UI14 185 aa1.55□□□□□ -2.16
SMC4-224ENST00000494612 FAT1Q14517 4588 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 TRAV14DV4A0A0A6YYC5 116 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 A8MWV9 139 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 E7EUB6 86 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 BAALC-AS2P0C853 105 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 GTF2A1P52655 376 aaPredicted RBP1.54□□□□□ -2.16
SMC4-224ENST00000494612 COA5Q86WW8 74 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 DEFB104AQ8WTQ1 72 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 ZC2HC1AQ96GY0 325 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 FAM107BQ9H098 131 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 OTORQ9NRC9 128 aa1.54□□□□□ -2.16
SMC4-224ENST00000494612 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 TRAV2A0A0B4J234 112 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 K7ERJ3 54 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 GNG7O60262 68 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 PRB4P10163 310 aaPredicted RBP1.53□□□□□ -2.16
SMC4-224ENST00000494612 FABP2P12104 132 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 RPL7P18124 248 aaKnown RBP1.53□□□□□ -2.16
SMC4-224ENST00000494612 AKR1C3P42330 323 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 NDUFA6P56556 154 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 HBBP68871 147 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 Q1T7F1 81 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 CCDC58Q4VC31 144 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 PSMG4Q5JS54 123 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 HRCT1Q6UXD1 115 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 TMEM167AQ8TBQ9 72 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 SPANXA1Q9NS26 97 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 LY96Q9Y6Y9 160 aa1.53□□□□□ -2.16
SMC4-224ENST00000494612 FAT3Q8TDW7 4589 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 SRRM2Q9UQ35 2752 aaKnown RBP1.52□□□□□ -2.17
SMC4-224ENST00000494612 TRBV6-7A0A0A0MS04 114 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 PNMA8CA0A1B0GUJ8 204 aa1.52□□□□□ -2.17
SMC4-224ENST00000494612 TRDV1A0A1B0GX56 115 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms