RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 RPL39P62891 51 aaKnown RBP7.72□□□□□ -1.17
SKA1-205ENST00000494518 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
SKA1-205ENST00000494518 C2orf48Q96LS8 159 aa7.72□□□□□ -1.17
SKA1-205ENST00000494518 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
SKA1-205ENST00000494518 KIR2DL4Q99706 377 aa7.72□□□□□ -1.17
SKA1-205ENST00000494518 FAM168BA1KXE4 195 aa7.71□□□□□ -1.18
SKA1-205ENST00000494518 SRP19P09132 144 aaKnown RBP7.71□□□□□ -1.18
SKA1-205ENST00000494518 SMAGPQ0VAQ4 97 aa7.71□□□□□ -1.18
SKA1-205ENST00000494518 PRR26Q8N8Z3 221 aa7.71□□□□□ -1.18
SKA1-205ENST00000494518 ORAOV1Q8WV07 137 aa7.71□□□□□ -1.18
SKA1-205ENST00000494518 CSDC2Q9Y534 153 aaKnown RBP7.71□□□□□ -1.18
SKA1-205ENST00000494518 hCG_2014768A0A024R1R8 64 aa7.7□□□□□ -1.18
SKA1-205ENST00000494518 C10orf25Q5T742 122 aa7.7□□□□□ -1.18
SKA1-205ENST00000494518 KRTAP11-1Q8IUC1 163 aa7.7□□□□□ -1.18
SKA1-205ENST00000494518 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
SKA1-205ENST00000494518 FAM19A5Q7Z5A7 132 aaPredicted RBP7.69□□□□□ -1.18
SKA1-205ENST00000494518 AKAP14Q86UN6 197 aa7.69□□□□□ -1.18
SKA1-205ENST00000494518 A0A087WZ39 114 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 PPP1R2P9O14990 202 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 PPP1R17O96001 155 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 IGLV7-43P04211 117 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 ADIRFQ15847 76 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 UNQ6190/PRO20217Q6UXQ8 127 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 OR10D4PQ8NGN7 298 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 TMEM18Q96B42 140 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 TIMM21Q9BVV7 248 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
SKA1-205ENST00000494518 NDUFA1O15239 70 aa7.67□□□□□ -1.18
SKA1-205ENST00000494518 CKS2P33552 79 aa7.67□□□□□ -1.18
SKA1-205ENST00000494518 RPL23P62829 140 aaKnown RBP7.67□□□□□ -1.18
SKA1-205ENST00000494518 RNF151Q2KHN1 245 aa7.67□□□□□ -1.18
SKA1-205ENST00000494518 DIRC1Q969H9 104 aa7.67□□□□□ -1.18
SKA1-205ENST00000494518 MRPL35Q9NZE8 188 aaKnown RBP7.67□□□□□ -1.18
SKA1-205ENST00000494518 C6orf48Q9UBA6 75 aa7.67□□□□□ -1.18
SKA1-205ENST00000494518 IFITM10A6NMD0 228 aa7.66□□□□□ -1.18
SKA1-205ENST00000494518 TCAPO15273 167 aa7.66□□□□□ -1.18
SKA1-205ENST00000494518 TNFRSF6BO95407 300 aa7.66□□□□□ -1.18
SKA1-205ENST00000494518 FAM74A3Q4VXF1 159 aa7.66□□□□□ -1.18
SKA1-205ENST00000494518 SMIM2Q9BVW6 85 aa7.66□□□□□ -1.18
SKA1-205ENST00000494518 KRTAP4-9Q9BYQ8 210 aa7.66□□□□□ -1.18
SKA1-205ENST00000494518 IGHV3OR16-9A0A0B4J2B5 98 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 D6R8Y8 96 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 NPYP01303 97 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 HBBP68871 147 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 TMEM241Q24JQ0 296 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 MRPL54Q6P161 138 aaKnown RBP7.65□□□□□ -1.18
SKA1-205ENST00000494518 IMMP2LQ96T52 175 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 C20orf78Q9BR46 151 aa7.65□□□□□ -1.18
SKA1-205ENST00000494518 SMIM27A0A1W2PRY6 76 aa7.64□□□□□ -1.19
SKA1-205ENST00000494518 C9JQL5 133 aa7.64□□□□□ -1.19
SKA1-205ENST00000494518 H0Y9J4 135 aa7.64□□□□□ -1.19
SKA1-205ENST00000494518 TRBV24-1A0A075B6N3 115 aa7.63□□□□□ -1.19
SKA1-205ENST00000494518 LINC00862A6NCI5 91 aa7.63□□□□□ -1.19
SKA1-205ENST00000494518 UBE2BP63146 152 aa7.63□□□□□ -1.19
SKA1-205ENST00000494518 KRTAP7-1Q8IUC3 87 aa7.63□□□□□ -1.19
SKA1-205ENST00000494518 SMDT1Q9H4I9 107 aa7.63□□□□□ -1.19
SKA1-205ENST00000494518 SPANXA1Q9NS26 97 aa7.63□□□□□ -1.19
SKA1-205ENST00000494518 M0QXV9 152 aa7.62□□□□□ -1.19
SKA1-205ENST00000494518 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
SKA1-205ENST00000494518 RPL32P62910 135 aaKnown RBP7.62□□□□□ -1.19
SKA1-205ENST00000494518 MRPS36P82909 103 aaKnown RBP7.62□□□□□ -1.19
SKA1-205ENST00000494518 NAT8Q9UHE5 227 aa7.62□□□□□ -1.19
SKA1-205ENST00000494518 TGIF2-C20orf24A0A0A6YYL0 155 aa7.61□□□□□ -1.19
SKA1-205ENST00000494518 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
SKA1-205ENST00000494518 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
SKA1-205ENST00000494518 KIAA0087Q14695 138 aa7.61□□□□□ -1.19
SKA1-205ENST00000494518 C2orf82Q6UX34 121 aa7.61□□□□□ -1.19
SKA1-205ENST00000494518 MUC2Q02817 5179 aa7.61□□□□□ -1.19
SKA1-205ENST00000494518 F8WDY8 70 aa7.6□□□□□ -1.19
SKA1-205ENST00000494518 ZC2HC1BQ5TFG8 222 aa7.6□□□□□ -1.19
SKA1-205ENST00000494518 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
SKA1-205ENST00000494518 A0A1B0GW15 77 aa7.59□□□□□ -1.19
SKA1-205ENST00000494518 A0A1B0GXF2 115 aa7.59□□□□□ -1.19
SKA1-205ENST00000494518 IFI27P40305 119 aaPredicted RBP7.59□□□□□ -1.19
SKA1-205ENST00000494518 UBE2D1P51668 147 aa7.59□□□□□ -1.19
SKA1-205ENST00000494518 PRR4Q16378 134 aa7.59□□□□□ -1.19
SKA1-205ENST00000494518 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
SKA1-205ENST00000494518 LINC00242Q5T6M2 205 aa7.59□□□□□ -1.19
SKA1-205ENST00000494518 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
SKA1-205ENST00000494518 LOC389332A0A1B0GUA5 103 aa7.58□□□□□ -1.2
SKA1-205ENST00000494518 F8W036 122 aa7.58□□□□□ -1.2
SKA1-205ENST00000494518 RAB5AP20339 215 aa7.58□□□□□ -1.2
SKA1-205ENST00000494518 LINC00469Q8N7U9 141 aa7.58□□□□□ -1.2
SKA1-205ENST00000494518 KRTAP4-2Q9BYR5 136 aa7.58□□□□□ -1.2
SKA1-205ENST00000494518 S100A8P05109 93 aa7.57□□□□□ -1.2
SKA1-205ENST00000494518 TMEM136Q6ZRR5 245 aa7.57□□□□□ -1.2
SKA1-205ENST00000494518 PACRGQ96M98 296 aaPredicted RBP7.57□□□□□ -1.2
SKA1-205ENST00000494518 PRELID3AQ96N28 172 aa7.57□□□□□ -1.2
SKA1-205ENST00000494518 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
SKA1-205ENST00000494518 TRBV30A0A0K0K1B3 111 aa7.56□□□□□ -1.2
SKA1-205ENST00000494518 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
SKA1-205ENST00000494518 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
SKA1-205ENST00000494518 TMEM141Q96I45 108 aa7.56□□□□□ -1.2
SKA1-205ENST00000494518 PPBPP02775 128 aa7.55□□□□□ -1.2
SKA1-205ENST00000494518 PEA15Q15121 130 aa7.55□□□□□ -1.2
SKA1-205ENST00000494518 TEX43Q6ZNM6 134 aa7.55□□□□□ -1.2
SKA1-205ENST00000494518 PYGO1Q9Y3Y4 419 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms