RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
HPS3-207ENST00000494327 Q8N8P6 123 aa14.01□□□□□ -0.17
HPS3-207ENST00000494327 FAM104AQ969W3 186 aa14.01□□□□□ -0.17
HPS3-207ENST00000494327 IFI27P40305 119 aaPredicted RBP14□□□□□ -0.17
HPS3-207ENST00000494327 ALKBH7Q9BT30 221 aaPredicted RBP14□□□□□ -0.17
HPS3-207ENST00000494327 MRPS36P82909 103 aaKnown RBP13.99□□□□□ -0.17
HPS3-207ENST00000494327 PRSS3P2Q8NHM4 247 aa13.99□□□□□ -0.17
HPS3-207ENST00000494327 IFITM10A6NMD0 228 aa13.98□□□□□ -0.17
HPS3-207ENST00000494327 VPS13BQ7Z7G8 4022 aa13.96□□□□□ -0.17
HPS3-207ENST00000494327 IGKV2-24A0A0C4DH68 120 aa13.96□□□□□ -0.17
HPS3-207ENST00000494327 CIRBPQ14011 172 aaKnown RBP13.96□□□□□ -0.17
HPS3-207ENST00000494327 CARD19Q96LW7 228 aa13.96□□□□□ -0.17
HPS3-207ENST00000494327 SRRM2Q9UQ35 2752 aaKnown RBP13.95□□□□□ -0.18
HPS3-207ENST00000494327 IGLV4-69A0A075B6H9 119 aa13.95□□□□□ -0.18
HPS3-207ENST00000494327 SYCNQ0VAF6 134 aa13.95□□□□□ -0.18
HPS3-207ENST00000494327 C2orf66Q6UXQ4 117 aa13.95□□□□□ -0.18
HPS3-207ENST00000494327 SPACA4Q8TDM5 124 aa13.95□□□□□ -0.18
HPS3-207ENST00000494327 CYSLTR1Q9Y271 337 aa13.95□□□□□ -0.18
HPS3-207ENST00000494327 PYGO1Q9Y3Y4 419 aa13.95□□□□□ -0.18
HPS3-207ENST00000494327 IGLV4-3A0A075B6K6 122 aa13.94□□□□□ -0.18
HPS3-207ENST00000494327 A0A087WYN8 130 aa13.94□□□□□ -0.18
HPS3-207ENST00000494327 APOMO95445 188 aa13.94□□□□□ -0.18
HPS3-207ENST00000494327 MAJINQ3KP22 176 aa13.94□□□□□ -0.18
HPS3-207ENST00000494327 ORMDL2Q53FV1 153 aa13.94□□□□□ -0.18
HPS3-207ENST00000494327 NXT2Q9NPJ8 142 aaKnown RBP13.94□□□□□ -0.18
HPS3-207ENST00000494327 TMEM141Q96I45 108 aa13.93□□□□□ -0.18
HPS3-207ENST00000494327 RPL37AP61513 92 aaKnown RBP13.92□□□□□ -0.18
HPS3-207ENST00000494327 C18orf32Q8TCD1 76 aa13.91□□□□□ -0.18
HPS3-207ENST00000494327 CAMK2N2Q96S95 79 aa13.91□□□□□ -0.18
HPS3-207ENST00000494327 A0A096LNI7 61 aa13.9□□□□□ -0.18
HPS3-207ENST00000494327 IGHV3OR16-9A0A0B4J2B5 98 aa13.9□□□□□ -0.18
HPS3-207ENST00000494327 K7EMI3 77 aa13.9□□□□□ -0.18
HPS3-207ENST00000494327 KRTAP10-4P60372 401 aaPredicted RBP13.9□□□□□ -0.18
HPS3-207ENST00000494327 SPAG11BQ08648 103 aa13.9□□□□□ -0.18
HPS3-207ENST00000494327 TEX43Q6ZNM6 134 aa13.9□□□□□ -0.18
HPS3-207ENST00000494327 Q6ZRU5 148 aa13.9□□□□□ -0.18
HPS3-207ENST00000494327 ZC2HC1BQ5TFG8 222 aa13.89□□□□□ -0.19
HPS3-207ENST00000494327 Q6ZN92 141 aa13.89□□□□□ -0.19
HPS3-207ENST00000494327 ORAOV1Q8WV07 137 aa13.88□□□□□ -0.19
HPS3-207ENST00000494327 VCX2Q9H322 139 aa13.88□□□□□ -0.19
HPS3-207ENST00000494327 PKIGQ9Y2B9 76 aa13.88□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BKO60814 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BJP06899 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BOP23527 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BBP33778 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BDP58876 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 RAB5BP61020 215 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BCP62807 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST2H2BEQ16778 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.87□□□□□ -0.19
HPS3-207ENST00000494327 LINC00242Q5T6M2 205 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 STPG4Q8N801 248 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BHQ93079 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 C2orf48Q96LS8 159 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BNQ99877 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 HIST1H2BMQ99879 126 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 C2orf88Q9BSF0 95 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 PLAC8Q9NZF1 115 aa13.87□□□□□ -0.19
HPS3-207ENST00000494327 FA2HQ7L5A8 372 aa13.86□□□□□ -0.19
HPS3-207ENST00000494327 BAGE3Q86Y29 109 aa13.86□□□□□ -0.19
HPS3-207ENST00000494327 OR10D4PQ8NGN7 298 aa13.86□□□□□ -0.19
HPS3-207ENST00000494327 IGIPA6NJ69 53 aa13.85□□□□□ -0.19
HPS3-207ENST00000494327 G0S2P27469 103 aa13.85□□□□□ -0.19
HPS3-207ENST00000494327 UBE2D1P51668 147 aa13.85□□□□□ -0.19
HPS3-207ENST00000494327 LINC00614P0C842 121 aa13.84□□□□□ -0.19
HPS3-207ENST00000494327 GAGE2BQ13066 116 aa13.84□□□□□ -0.19
HPS3-207ENST00000494327 LINC00173Q6ZV60 143 aa13.84□□□□□ -0.19
HPS3-207ENST00000494327 AMELXQ99217 191 aa13.84□□□□□ -0.19
HPS3-207ENST00000494327 LINC00474Q9P2X8 69 aa13.84□□□□□ -0.19
HPS3-207ENST00000494327 FLG2Q5D862 2391 aaPredicted RBP13.83□□□□□ -0.19
HPS3-207ENST00000494327 LOC107984640A0A0U1RRK4 108 aa13.83□□□□□ -0.2
HPS3-207ENST00000494327 TOMM6Q96B49 74 aa13.83□□□□□ -0.2
HPS3-207ENST00000494327 A0A087WZ39 114 aa13.82□□□□□ -0.2
HPS3-207ENST00000494327 A0A0J9YXV3 536 aa13.82□□□□□ -0.2
HPS3-207ENST00000494327 LINC01546A6NGU7 62 aa13.81□□□□□ -0.2
HPS3-207ENST00000494327 NPSP0C0P6 89 aa13.81□□□□□ -0.2
HPS3-207ENST00000494327 C7orf33Q8WU49 177 aa13.81□□□□□ -0.2
HPS3-207ENST00000494327 SCGB3A1Q96QR1 104 aa13.81□□□□□ -0.2
HPS3-207ENST00000494327 J3QL48 77 aa13.8□□□□□ -0.2
HPS3-207ENST00000494327 PTTG1IPP53801 180 aa13.8□□□□□ -0.2
HPS3-207ENST00000494327 NDUFA6P56556 154 aa13.8□□□□□ -0.2
HPS3-207ENST00000494327 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
HPS3-207ENST00000494327 CHCHD1Q96BP2 118 aaKnown RBP13.8□□□□□ -0.2
HPS3-207ENST00000494327 URB1-AS1Q96HZ7 61 aa13.8□□□□□ -0.2
HPS3-207ENST00000494327 TIMM17AQ99595 171 aa13.8□□□□□ -0.2
HPS3-207ENST00000494327 NDUFA1O15239 70 aa13.79□□□□□ -0.2
HPS3-207ENST00000494327 RPL18AQ02543 176 aaKnown RBP13.79□□□□□ -0.2
HPS3-207ENST00000494327 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.78□□□□□ -0.2
HPS3-207ENST00000494327 HNRNPA3P51991 378 aaKnown RBP13.78□□□□□ -0.2
HPS3-207ENST00000494327 UNQ6190/PRO20217Q6UXQ8 127 aa13.78□□□□□ -0.2
HPS3-207ENST00000494327 ERASQ7Z444 233 aa13.78□□□□□ -0.2
HPS3-207ENST00000494327 F8WDY8 70 aa13.77□□□□□ -0.21
HPS3-207ENST00000494327 RNF151Q2KHN1 245 aa13.77□□□□□ -0.21
HPS3-207ENST00000494327 C10orf25Q5T742 122 aa13.77□□□□□ -0.21
HPS3-207ENST00000494327 MRPL35Q9NZE8 188 aaKnown RBP13.77□□□□□ -0.21
HPS3-207ENST00000494327 MYCBP2O75592 4640 aa13.77□□□□□ -0.21
HPS3-207ENST00000494327 SERF1AO75920 110 aa13.76□□□□□ -0.21
HPS3-207ENST00000494327 HSBP1O75506 76 aa13.75□□□□□ -0.21
HPS3-207ENST00000494327 KIAA0087Q14695 138 aa13.75□□□□□ -0.21
HPS3-207ENST00000494327 COA6Q5JTJ3 125 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms