RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 INAFM2P0DMQ5 153 aa10.32□□□□□ -0.76
SATB1-217ENST00000493952 CIRBPQ14011 172 aaKnown RBP10.32□□□□□ -0.76
SATB1-217ENST00000493952 IGHV3OR16-9A0A0B4J2B5 98 aa10.31□□□□□ -0.76
SATB1-217ENST00000493952 COX6A2Q02221 97 aa10.31□□□□□ -0.76
SATB1-217ENST00000493952 FABP9Q0Z7S8 132 aa10.31□□□□□ -0.76
SATB1-217ENST00000493952 IGLV4-69A0A075B6H9 119 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 TEX43Q6ZNM6 134 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 LINC00173Q6ZV60 143 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 PRSS3P2Q8NHM4 247 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 CARD19Q96LW7 228 aa10.3□□□□□ -0.76
SATB1-217ENST00000493952 APOMO95445 188 aa10.29□□□□□ -0.76
SATB1-217ENST00000493952 PLA2G1BP04054 148 aaKnown RBP10.29□□□□□ -0.76
SATB1-217ENST00000493952 SYCNQ0VAF6 134 aa10.29□□□□□ -0.76
SATB1-217ENST00000493952 LINC00242Q5T6M2 205 aa10.29□□□□□ -0.76
SATB1-217ENST00000493952 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
SATB1-217ENST00000493952 SRRM2Q9UQ35 2752 aaKnown RBP10.29□□□□□ -0.76
SATB1-217ENST00000493952 NPSP0C0P6 89 aa10.28□□□□□ -0.76
SATB1-217ENST00000493952 UBE2D1P51668 147 aa10.28□□□□□ -0.76
SATB1-217ENST00000493952 Q6ZN92 141 aa10.28□□□□□ -0.76
SATB1-217ENST00000493952 TOMM6Q96B49 74 aa10.28□□□□□ -0.76
SATB1-217ENST00000493952 AMELXQ99217 191 aa10.28□□□□□ -0.76
SATB1-217ENST00000493952 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 LINC01546A6NGU7 62 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 G0S2P27469 103 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 Q6ZRU5 148 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 ORAOV1Q8WV07 137 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 C2orf88Q9BSF0 95 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 TRAPPC1Q9Y5R8 145 aa10.27□□□□□ -0.77
SATB1-217ENST00000493952 A0A087WYN8 130 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 A0A096LNI7 61 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 C2orf48Q96LS8 159 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 VCX2Q9H322 139 aa10.26□□□□□ -0.77
SATB1-217ENST00000493952 FLG2Q5D862 2391 aaPredicted RBP10.25□□□□□ -0.77
SATB1-217ENST00000493952 KRTAP10-4P60372 401 aaPredicted RBP10.25□□□□□ -0.77
SATB1-217ENST00000493952 DPH3Q96FX2 82 aa10.25□□□□□ -0.77
SATB1-217ENST00000493952 YPEL4Q96NS1 127 aa10.25□□□□□ -0.77
SATB1-217ENST00000493952 A0A087WZ39 114 aa10.24□□□□□ -0.77
SATB1-217ENST00000493952 MAJINQ3KP22 176 aa10.24□□□□□ -0.77
SATB1-217ENST00000493952 FA2HQ7L5A8 372 aa10.24□□□□□ -0.77
SATB1-217ENST00000493952 ERASQ7Z444 233 aa10.24□□□□□ -0.77
SATB1-217ENST00000493952 SLC7A5P1Q8MH63 180 aa10.24□□□□□ -0.77
SATB1-217ENST00000493952 SMCO4Q9NRQ5 59 aa10.24□□□□□ -0.77
SATB1-217ENST00000493952 C18orf32Q8TCD1 76 aa10.23□□□□□ -0.77
SATB1-217ENST00000493952 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
SATB1-217ENST00000493952 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
SATB1-217ENST00000493952 PKIGQ9Y2B9 76 aa10.23□□□□□ -0.77
SATB1-217ENST00000493952 PAPPA-AS1Q5QFB9 102 aa10.22□□□□□ -0.77
SATB1-217ENST00000493952 FAM19A3Q7Z5A8 133 aa10.22□□□□□ -0.77
SATB1-217ENST00000493952 URB1-AS1Q96HZ7 61 aa10.22□□□□□ -0.77
SATB1-217ENST00000493952 RPL37AP61513 92 aaKnown RBP10.21□□□□□ -0.77
SATB1-217ENST00000493952 CBLN2Q8IUK8 224 aa10.21□□□□□ -0.77
SATB1-217ENST00000493952 STPG4Q8N801 248 aa10.21□□□□□ -0.77
SATB1-217ENST00000493952 A0A0J9YXV3 536 aa10.2□□□□□ -0.78
SATB1-217ENST00000493952 LOC107984640A0A0U1RRK4 108 aa10.2□□□□□ -0.78
SATB1-217ENST00000493952 LINC01549A6NIU2 74 aa10.2□□□□□ -0.78
SATB1-217ENST00000493952 KIAA0087Q14695 138 aa10.2□□□□□ -0.78
SATB1-217ENST00000493952 A0A096LNJ9 63 aa10.19□□□□□ -0.78
SATB1-217ENST00000493952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.19□□□□□ -0.78
SATB1-217ENST00000493952 GAGE2BQ13066 116 aa10.19□□□□□ -0.78
SATB1-217ENST00000493952 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
SATB1-217ENST00000493952 LINC01561Q8N1V8 128 aa10.19□□□□□ -0.78
SATB1-217ENST00000493952 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
SATB1-217ENST00000493952 LINC00474Q9P2X8 69 aa10.19□□□□□ -0.78
SATB1-217ENST00000493952 F8WDY8 70 aa10.18□□□□□ -0.78
SATB1-217ENST00000493952 NDUFA1O15239 70 aa10.18□□□□□ -0.78
SATB1-217ENST00000493952 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
SATB1-217ENST00000493952 HERVK_113P63121 156 aa10.18□□□□□ -0.78
SATB1-217ENST00000493952 RNF151Q2KHN1 245 aa10.18□□□□□ -0.78
SATB1-217ENST00000493952 CDKN2A-AS1Q9UH64 79 aa10.18□□□□□ -0.78
SATB1-217ENST00000493952 MYCBP2O75592 4640 aa10.17□□□□□ -0.78
SATB1-217ENST00000493952 LINC00614P0C842 121 aa10.17□□□□□ -0.78
SATB1-217ENST00000493952 SEC11AP67812 179 aa10.17□□□□□ -0.78
SATB1-217ENST00000493952 UNQ6190/PRO20217Q6UXQ8 127 aa10.17□□□□□ -0.78
SATB1-217ENST00000493952 RPL18AQ02543 176 aaKnown RBP10.16□□□□□ -0.78
SATB1-217ENST00000493952 GEMIN7Q9H840 131 aaKnown RBP10.16□□□□□ -0.78
SATB1-217ENST00000493952 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
SATB1-217ENST00000493952 PMVKQ15126 192 aa10.15□□□□□ -0.78
SATB1-217ENST00000493952 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
SATB1-217ENST00000493952 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
SATB1-217ENST00000493952 CST9LQ9H4G1 147 aa10.15□□□□□ -0.78
SATB1-217ENST00000493952 HBDP02042 147 aa10.14□□□□□ -0.79
SATB1-217ENST00000493952 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
SATB1-217ENST00000493952 TINCRA0A1B0GVN0 87 aa10.13□□□□□ -0.79
SATB1-217ENST00000493952 RAB5BP61020 215 aa10.13□□□□□ -0.79
SATB1-217ENST00000493952 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
SATB1-217ENST00000493952 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
SATB1-217ENST00000493952 TOMM7Q9P0U1 55 aa10.13□□□□□ -0.79
SATB1-217ENST00000493952 PKHD1L1Q86WI1 4243 aa10.13□□□□□ -0.79
SATB1-217ENST00000493952 IGLV5-45A0A087WSX0 123 aa10.12□□□□□ -0.79
SATB1-217ENST00000493952 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
SATB1-217ENST00000493952 Q8IZM0 81 aa10.12□□□□□ -0.79
SATB1-217ENST00000493952 LINC00469Q8N7U9 141 aa10.12□□□□□ -0.79
SATB1-217ENST00000493952 DMBT1Q9UGM3 2413 aaPredicted RBP10.12□□□□□ -0.79
SATB1-217ENST00000493952 TRBV30A0A0K0K1B3 111 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms