RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 CKS2P33552 79 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 RHOHQ15669 191 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 FAM222AQ5U5X8 452 aa8.44□□□□□ -1.06
BRCA1-222ENST00000493919 TRAV13-2A0A0B4J235 113 aa8.43□□□□□ -1.06
BRCA1-222ENST00000493919 I3L2K1 104 aa8.43□□□□□ -1.06
BRCA1-222ENST00000493919 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 INAFM2P0DMQ5 153 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 ORMDL3Q8N138 153 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 TRAV12-1A0A0B4J245 112 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 TMEM256-PLSCR3K7ERE1 68 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 NXPH4O95158 308 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 UBE2BP63146 152 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 C9orf66Q5T8R8 295 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 TIMM17AQ99595 171 aa8.42□□□□□ -1.06
BRCA1-222ENST00000493919 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
BRCA1-222ENST00000493919 DNAH3Q8TD57 4116 aa8.41□□□□□ -1.06
BRCA1-222ENST00000493919 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
BRCA1-222ENST00000493919 LCA10Q71F78 164 aa8.41□□□□□ -1.06
BRCA1-222ENST00000493919 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
BRCA1-222ENST00000493919 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
BRCA1-222ENST00000493919 TIMM21Q9BVV7 248 aa8.41□□□□□ -1.06
BRCA1-222ENST00000493919 IGHV3-30P01768 117 aa8.41□□□□□ -1.06
BRCA1-222ENST00000493919 IGHV3-30-5P0DP03 117 aa8.41□□□□□ -1.06
BRCA1-222ENST00000493919 AGRNO00468 2067 aa8.4□□□□□ -1.06
BRCA1-222ENST00000493919 F6UB75 175 aa8.4□□□□□ -1.06
BRCA1-222ENST00000493919 PRB2P02812 416 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-222ENST00000493919 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.06
BRCA1-222ENST00000493919 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
BRCA1-222ENST00000493919 MRPL36Q9P0J6 103 aaKnown RBP8.4□□□□□ -1.06
BRCA1-222ENST00000493919 IGHV3OR16-8A0A075B7F1 116 aa8.39□□□□□ -1.07
BRCA1-222ENST00000493919 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
BRCA1-222ENST00000493919 LST1O00453 97 aa8.39□□□□□ -1.07
BRCA1-222ENST00000493919 GHRHP01286 108 aa8.39□□□□□ -1.07
BRCA1-222ENST00000493919 UBE2D4Q9Y2X8 147 aa8.39□□□□□ -1.07
BRCA1-222ENST00000493919 TRAV7A0A075B6U4 112 aa8.38□□□□□ -1.07
BRCA1-222ENST00000493919 CTSGP08311 255 aa8.38□□□□□ -1.07
BRCA1-222ENST00000493919 PAPPA-AS1Q5QFB9 102 aa8.38□□□□□ -1.07
BRCA1-222ENST00000493919 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
BRCA1-222ENST00000493919 GPHB5Q86YW7 130 aa8.38□□□□□ -1.07
BRCA1-222ENST00000493919 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
BRCA1-222ENST00000493919 Q1T7F1 81 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 ESRGQ1W209 222 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 A0A0J9YY99 117 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 F8VRH5 84 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 NDUFA4O00483 81 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 ZNF876PQ49A33 203 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 TOMM6Q96B49 74 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 FXYD5Q96DB9 178 aa8.37□□□□□ -1.07
BRCA1-222ENST00000493919 PRKDCP78527 4128 aaKnown RBP8.36□□□□□ -1.07
BRCA1-222ENST00000493919 TMEM223A0PJW6 202 aa8.36□□□□□ -1.07
BRCA1-222ENST00000493919 A8MUN3 132 aa8.36□□□□□ -1.07
BRCA1-222ENST00000493919 KRTAP10-11P60412 298 aa8.36□□□□□ -1.07
BRCA1-222ENST00000493919 KPRPQ5T749 579 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-222ENST00000493919 LOC389332A0A1B0GUA5 103 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
BRCA1-222ENST00000493919 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
BRCA1-222ENST00000493919 EGFEM1PQ0D2K5 195 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 Q1RN00 199 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 MPLKIPQ8TAP9 179 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 D6R8Y8 96 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 IGLV1-51P01701 117 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 PRR25Q96S07 402 aa8.35□□□□□ -1.07
BRCA1-222ENST00000493919 IGHV3-49A0A0A0MS15 119 aa8.34□□□□□ -1.07
BRCA1-222ENST00000493919 IGKV1-17P01599 117 aa8.34□□□□□ -1.07
BRCA1-222ENST00000493919 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-222ENST00000493919 IGHV3OR16-13A0A075B7E8 117 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 IGHV3-74A0A0B4J1X5 117 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 OVOL2Q9BRP0 275 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 M0R381 172 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 TRIAP1O43715 76 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 PRSS2P07478 247 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 S100A7L2Q5SY68 101 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 ZFAND3Q9H8U3 227 aa8.33□□□□□ -1.08
BRCA1-222ENST00000493919 IGHV3-66A0A0C4DH42 116 aa8.32□□□□□ -1.08
BRCA1-222ENST00000493919 IGKV1OR2-108A0A075B7D4 117 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 DEFB114Q30KQ6 69 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 MIR17HGQ75NE6 70 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 TMEM61Q8N0U2 210 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 ICOSQ9Y6W8 199 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 SORL1Q92673 2214 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 IGKV1D-37A0A075B6S9 117 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 A0A0A0MQY5 61 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 IGHV7-4-1A0A0J9YVY3 117 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 F8WEM9 126 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 RHPN1-AS1Q9BWJ2 59 aa8.31□□□□□ -1.08
BRCA1-222ENST00000493919 IGKV3-7A0A075B6H7 116 aa8.3□□□□□ -1.08
BRCA1-222ENST00000493919 LYZP61626 148 aa8.3□□□□□ -1.08
BRCA1-222ENST00000493919 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
BRCA1-222ENST00000493919 X6R8D5 127 aa8.3□□□□□ -1.08
BRCA1-222ENST00000493919 K7EIL1 84 aa8.29□□□□□ -1.08
BRCA1-222ENST00000493919 MRPL51Q4U2R6 128 aaKnown RBP8.29□□□□□ -1.08
BRCA1-222ENST00000493919 DIRC1Q969H9 104 aa8.29□□□□□ -1.08
BRCA1-222ENST00000493919 TRBV6-1A0A0K0K1D8 114 aa8.28□□□□□ -1.08
BRCA1-222ENST00000493919 ARMS2P0C7Q2 107 aa8.28□□□□□ -1.08
BRCA1-222ENST00000493919 FUSP35637 526 aaKnown RBP eCLIP8.28□□□□□ -1.08
BRCA1-222ENST00000493919 ATP11AUNQ6ZP68 121 aa8.28□□□□□ -1.08
BRCA1-222ENST00000493919 TRAV8-3A0A0A6YYJ7 113 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms