RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FABP4P15090 132 aa8.34□□□□□ -1.07
SNX17-208ENST00000493711 HIST3H2BBQ8N257 126 aa8.34□□□□□ -1.07
SNX17-208ENST00000493711 Q9HAA7 133 aa8.34□□□□□ -1.07
SNX17-208ENST00000493711 RYR1P21817 5038 aa8.34□□□□□ -1.08
SNX17-208ENST00000493711 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
SNX17-208ENST00000493711 IGKV3OR2-268A0A0C4DH90 116 aa8.33□□□□□ -1.08
SNX17-208ENST00000493711 C5orf52A6NGY3 159 aa8.33□□□□□ -1.08
SNX17-208ENST00000493711 SNRPEP62304 92 aaKnown RBP8.33□□□□□ -1.08
SNX17-208ENST00000493711 RNASE13Q5GAN3 156 aaKnown RBP8.33□□□□□ -1.08
SNX17-208ENST00000493711 CLPSL2Q6UWE3 100 aa8.33□□□□□ -1.08
SNX17-208ENST00000493711 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
SNX17-208ENST00000493711 ALMS1Q8TCU4 4167 aa8.32□□□□□ -1.08
SNX17-208ENST00000493711 PRSS29PA6NIE9 313 aa8.32□□□□□ -1.08
SNX17-208ENST00000493711 PSCAO43653 123 aa8.32□□□□□ -1.08
SNX17-208ENST00000493711 UBE2D1P51668 147 aa8.32□□□□□ -1.08
SNX17-208ENST00000493711 CD164L2Q6UWJ8 174 aa8.32□□□□□ -1.08
SNX17-208ENST00000493711 LINC00173Q6ZV60 143 aa8.32□□□□□ -1.08
SNX17-208ENST00000493711 CHCHD10Q8WYQ3 142 aaPredicted RBP8.32□□□□□ -1.08
SNX17-208ENST00000493711 AKR1D1P51857 326 aa8.31□□□□□ -1.08
SNX17-208ENST00000493711 HERVK_113P63121 156 aa8.31□□□□□ -1.08
SNX17-208ENST00000493711 SPATA12Q7Z6I5 190 aa8.31□□□□□ -1.08
SNX17-208ENST00000493711 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
SNX17-208ENST00000493711 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
SNX17-208ENST00000493711 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
SNX17-208ENST00000493711 TINCRA0A1B0GVN0 87 aa8.3□□□□□ -1.08
SNX17-208ENST00000493711 PET117Q6UWS5 81 aa8.3□□□□□ -1.08
SNX17-208ENST00000493711 HIST1H2BLQ99880 126 aa8.3□□□□□ -1.08
SNX17-208ENST00000493711 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
SNX17-208ENST00000493711 CHTOPQ9Y3Y2 248 aaKnown RBP8.3□□□□□ -1.08
SNX17-208ENST00000493711 C20orf202A1L168 122 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 SYS1-DBNDD2H3BUS1 97 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 XCL1P47992 114 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 LINC00242Q5T6M2 205 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
SNX17-208ENST00000493711 F8VRH5 84 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 COX7A2LO14548 114 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 IGLC3P0DOY3 106 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 PLNP26678 52 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 ZC2HC1BQ5TFG8 222 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 KRTAP26-1Q6PEX3 210 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
SNX17-208ENST00000493711 KRTAP9-9Q9BYP9 154 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 KRTAP9-4Q9BYQ2 154 aa8.28□□□□□ -1.08
SNX17-208ENST00000493711 A0A0J9YXV3 536 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 H3BRM9 83 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 APOMO95445 188 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 MALP21145 153 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 KRTDAPP60985 99 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 FOXI1Q12951 378 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 VPS13DQ5THJ4 4388 aa8.27□□□□□ -1.09
SNX17-208ENST00000493711 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 IGLV5-45A0A087WSX0 123 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 A0A087WZ39 114 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 H0Y8G0 127 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 C3orf79P0CE67 100 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 ODF1Q14990 250 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
SNX17-208ENST00000493711 DPM2O94777 84 aa8.25□□□□□ -1.09
SNX17-208ENST00000493711 LINC01545Q5VT33 79 aa8.25□□□□□ -1.09
SNX17-208ENST00000493711 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
SNX17-208ENST00000493711 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
SNX17-208ENST00000493711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.25□□□□□ -1.09
SNX17-208ENST00000493711 IGLV4-69A0A075B6H9 119 aa8.24□□□□□ -1.09
SNX17-208ENST00000493711 IGHV1-58A0A0C4DH39 117 aa8.24□□□□□ -1.09
SNX17-208ENST00000493711 RTL8CO15255 209 aa8.23□□□□□ -1.09
SNX17-208ENST00000493711 IGKCP01834 107 aa8.23□□□□□ -1.09
SNX17-208ENST00000493711 COX6A2Q02221 97 aa8.23□□□□□ -1.09
SNX17-208ENST00000493711 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
SNX17-208ENST00000493711 OR10D4PQ8NGN7 298 aa8.23□□□□□ -1.09
SNX17-208ENST00000493711 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
SNX17-208ENST00000493711 C11orf86A6NJI1 115 aa8.22□□□□□ -1.09
SNX17-208ENST00000493711 TMEM170BQ5T4T1 132 aa8.22□□□□□ -1.09
SNX17-208ENST00000493711 MAPKAPK5-AS1Q8N8E1 139 aa8.22□□□□□ -1.09
SNX17-208ENST00000493711 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.1
SNX17-208ENST00000493711 LRCOL1A6NCL2 159 aa8.21□□□□□ -1.1
SNX17-208ENST00000493711 USP17L23D6RBM5 183 aa8.21□□□□□ -1.1
SNX17-208ENST00000493711 F8WDY8 70 aa8.21□□□□□ -1.1
SNX17-208ENST00000493711 ZNF22P17026 224 aaPredicted RBP8.21□□□□□ -1.1
SNX17-208ENST00000493711 A0A087WTM6 91 aa8.2□□□□□ -1.1
SNX17-208ENST00000493711 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
SNX17-208ENST00000493711 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
SNX17-208ENST00000493711 HERVK_113P61574 105 aa8.2□□□□□ -1.1
SNX17-208ENST00000493711 DNAH6Q9C0G6 4158 aa8.19□□□□□ -1.1
SNX17-208ENST00000493711 PRSS2P07478 247 aa8.19□□□□□ -1.1
SNX17-208ENST00000493711 ORAOV1Q8WV07 137 aa8.19□□□□□ -1.1
SNX17-208ENST00000493711 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 H3BS24 57 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 Q8IZM0 81 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 C15orf56Q8N910 161 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 NTN5Q8WTR8 489 aaPredicted RBP8.18□□□□□ -1.1
SNX17-208ENST00000493711 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 PMCHL2Q9BQD1 86 aa8.18□□□□□ -1.1
SNX17-208ENST00000493711 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
SNX17-208ENST00000493711 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms