RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 LINC00242Q5T6M2 205 aa9.55□□□□□ -0.88
NECAB3-214ENST00000493590 MED9Q9NWA0 146 aa9.55□□□□□ -0.88
NECAB3-214ENST00000493590 C2orf82Q6UX34 121 aa9.54□□□□□ -0.88
NECAB3-214ENST00000493590 LINC00337Q8N6G1 96 aa9.54□□□□□ -0.88
NECAB3-214ENST00000493590 C22orf24Q9Y442 160 aa9.54□□□□□ -0.88
NECAB3-214ENST00000493590 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
NECAB3-214ENST00000493590 BCE1O60756 84 aa9.53□□□□□ -0.88
NECAB3-214ENST00000493590 LINC00469Q8N7U9 141 aa9.53□□□□□ -0.88
NECAB3-214ENST00000493590 BATF3Q9NR55 127 aa9.53□□□□□ -0.88
NECAB3-214ENST00000493590 VCYO14598 125 aa9.52□□□□□ -0.89
NECAB3-214ENST00000493590 ASB16-AS1Q495Z4 193 aa9.52□□□□□ -0.89
NECAB3-214ENST00000493590 LBHQ53QV2 105 aaPredicted RBP9.52□□□□□ -0.89
NECAB3-214ENST00000493590 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
NECAB3-214ENST00000493590 TRBV30A0A0K0K1B3 111 aa9.51□□□□□ -0.89
NECAB3-214ENST00000493590 SMKR1H3BMG3 65 aa9.51□□□□□ -0.89
NECAB3-214ENST00000493590 IGKV2D-26A0A0A0MRZ7 120 aa9.5□□□□□ -0.89
NECAB3-214ENST00000493590 K7EN84 100 aa9.5□□□□□ -0.89
NECAB3-214ENST00000493590 KIR2DL4Q99706 377 aa9.5□□□□□ -0.89
NECAB3-214ENST00000493590 PDE6DO43924 150 aa9.49□□□□□ -0.89
NECAB3-214ENST00000493590 KIAA0087Q14695 138 aa9.49□□□□□ -0.89
NECAB3-214ENST00000493590 TMEM18Q96B42 140 aa9.49□□□□□ -0.89
NECAB3-214ENST00000493590 BORCS7Q96B45 105 aa9.49□□□□□ -0.89
NECAB3-214ENST00000493590 XAGE1AQ9HD64 81 aa9.49□□□□□ -0.89
NECAB3-214ENST00000493590 TGIF2-C20orf24A0A0A6YYL0 155 aa9.48□□□□□ -0.89
NECAB3-214ENST00000493590 IFITM10A6NMD0 228 aa9.48□□□□□ -0.89
NECAB3-214ENST00000493590 RAB4AP20338 218 aa9.48□□□□□ -0.89
NECAB3-214ENST00000493590 AMN1Q8IY45 258 aa9.48□□□□□ -0.89
NECAB3-214ENST00000493590 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
NECAB3-214ENST00000493590 RPL39P62891 51 aaKnown RBP9.47□□□□□ -0.89
NECAB3-214ENST00000493590 FAM229BQ4G0N7 80 aa9.47□□□□□ -0.89
NECAB3-214ENST00000493590 MRPL55Q7Z7F7 128 aaKnown RBP9.47□□□□□ -0.89
NECAB3-214ENST00000493590 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
NECAB3-214ENST00000493590 ZNF727A8MUV8 499 aa9.46□□□□□ -0.9
NECAB3-214ENST00000493590 GATCO43716 136 aaKnown RBP9.46□□□□□ -0.9
NECAB3-214ENST00000493590 UBE2AP49459 152 aa9.46□□□□□ -0.9
NECAB3-214ENST00000493590 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.9
NECAB3-214ENST00000493590 HBBP68871 147 aa9.46□□□□□ -0.9
NECAB3-214ENST00000493590 OCC1Q8TAD7 63 aa9.46□□□□□ -0.9
NECAB3-214ENST00000493590 SMLR1H3BR10 107 aa9.45□□□□□ -0.9
NECAB3-214ENST00000493590 SEC61BP60468 96 aaKnown RBP9.45□□□□□ -0.9
NECAB3-214ENST00000493590 TMEM191AQ9H0A3 160 aa9.45□□□□□ -0.9
NECAB3-214ENST00000493590 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
NECAB3-214ENST00000493590 FAM104AQ969W3 186 aa9.44□□□□□ -0.9
NECAB3-214ENST00000493590 KRTAP9-7A8MTY7 169 aa9.43□□□□□ -0.9
NECAB3-214ENST00000493590 A8MWL6 223 aa9.43□□□□□ -0.9
NECAB3-214ENST00000493590 NRACQ8N912 160 aa9.43□□□□□ -0.9
NECAB3-214ENST00000493590 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
NECAB3-214ENST00000493590 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
NECAB3-214ENST00000493590 TEX46H3BTG2 121 aa9.41□□□□□ -0.9
NECAB3-214ENST00000493590 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
NECAB3-214ENST00000493590 FP248Q71RG6 208 aaPredicted RBP9.41□□□□□ -0.9
NECAB3-214ENST00000493590 SPANXA1Q9NS26 97 aa9.41□□□□□ -0.9
NECAB3-214ENST00000493590 TOMM7Q9P0U1 55 aa9.41□□□□□ -0.9
NECAB3-214ENST00000493590 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
NECAB3-214ENST00000493590 KANTRA0A1W2PQU2 76 aa9.4□□□□□ -0.9
NECAB3-214ENST00000493590 PPP1R17O96001 155 aa9.4□□□□□ -0.9
NECAB3-214ENST00000493590 CKS1BP61024 79 aa9.4□□□□□ -0.9
NECAB3-214ENST00000493590 LINC00167Q96N53 147 aa9.4□□□□□ -0.9
NECAB3-214ENST00000493590 PPP1R2P9O14990 202 aa9.39□□□□□ -0.91
NECAB3-214ENST00000493590 PRSS2P07478 247 aa9.39□□□□□ -0.91
NECAB3-214ENST00000493590 CTAG1AP78358 180 aa9.39□□□□□ -0.91
NECAB3-214ENST00000493590 MRPS36P82909 103 aaKnown RBP9.39□□□□□ -0.91
NECAB3-214ENST00000493590 ZNF345Q14585 488 aa9.39□□□□□ -0.91
NECAB3-214ENST00000493590 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
NECAB3-214ENST00000493590 HIGD1CA8MV81 97 aa9.38□□□□□ -0.91
NECAB3-214ENST00000493590 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
NECAB3-214ENST00000493590 MT1HP80294 61 aa9.38□□□□□ -0.91
NECAB3-214ENST00000493590 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
NECAB3-214ENST00000493590 KRTAP13-1Q8IUC0 172 aa9.38□□□□□ -0.91
NECAB3-214ENST00000493590 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
NECAB3-214ENST00000493590 PRLHP81277 87 aa9.35□□□□□ -0.91
NECAB3-214ENST00000493590 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
NECAB3-214ENST00000493590 FAM231DQ6ZW35 169 aa9.35□□□□□ -0.91
NECAB3-214ENST00000493590 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
NECAB3-214ENST00000493590 PNRC1Q12796 327 aaPredicted RBP9.34□□□□□ -0.91
NECAB3-214ENST00000493590 CT83Q5H943 113 aa9.34□□□□□ -0.91
NECAB3-214ENST00000493590 TCAPO15273 167 aa9.33□□□□□ -0.92
NECAB3-214ENST00000493590 MRPL51Q4U2R6 128 aaKnown RBP9.33□□□□□ -0.92
NECAB3-214ENST00000493590 SPAG11AQ6PDA7 123 aa9.33□□□□□ -0.92
NECAB3-214ENST00000493590 IFI27P40305 119 aaPredicted RBP9.32□□□□□ -0.92
NECAB3-214ENST00000493590 RIGQ13278 110 aa9.32□□□□□ -0.92
NECAB3-214ENST00000493590 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
NECAB3-214ENST00000493590 C20orf78Q9BR46 151 aa9.32□□□□□ -0.92
NECAB3-214ENST00000493590 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
NECAB3-214ENST00000493590 HMSDA8MTL9 139 aa9.31□□□□□ -0.92
NECAB3-214ENST00000493590 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
NECAB3-214ENST00000493590 CEBPGP53567 150 aa9.31□□□□□ -0.92
NECAB3-214ENST00000493590 ALKBH7Q9BT30 221 aaPredicted RBP9.31□□□□□ -0.92
NECAB3-214ENST00000493590 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
NECAB3-214ENST00000493590 LORP23490 312 aaPredicted RBP9.3□□□□□ -0.92
NECAB3-214ENST00000493590 KRTAP10-6P60371 365 aaPredicted RBP9.3□□□□□ -0.92
NECAB3-214ENST00000493590 Q6ZN92 141 aa9.3□□□□□ -0.92
NECAB3-214ENST00000493590 NKAPP1Q8N9T2 125 aa9.3□□□□□ -0.92
NECAB3-214ENST00000493590 IGLV4-3A0A075B6K6 122 aa9.29□□□□□ -0.92
NECAB3-214ENST00000493590 CKS2P33552 79 aa9.29□□□□□ -0.92
NECAB3-214ENST00000493590 KRTAP19-2Q3LHN2 52 aa9.29□□□□□ -0.92
NECAB3-214ENST00000493590 FAM19A1Q7Z5A9 133 aa9.29□□□□□ -0.92
NECAB3-214ENST00000493590 Q8IZM0 81 aa9.29□□□□□ -0.92
NECAB3-214ENST00000493590 LINC01561Q8N1V8 128 aa9.29□□□□□ -0.92
NECAB3-214ENST00000493590 F8VRH5 84 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms