RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 RPL7L1Q6DKI1 246 aaKnown RBP2.47□□□□□ -2.01
CLIP4-212ENST00000493551 BAGE2Q86Y30 109 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 ENKURQ8TC29 256 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 HIST1H2BAQ96A08 127 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 ISOC2Q96AB3 205 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 TMEM101Q96IK0 257 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 BTF3L4Q96K17 158 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 MAP1LC3BQ9GZQ8 125 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 NIT2Q9NQR4 276 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 TMEM242Q9NWH2 141 aa2.47□□□□□ -2.01
CLIP4-212ENST00000493551 CTXND1A0A1B0GTU2 59 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 PET100P0DJ07 73 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 PMCHP20382 165 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 FHITP49789 147 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 AKR1C8PQ5T2L2 129 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 LINC00242Q5T6M2 205 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 MZT2BQ6NZ67 158 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 LYZL1Q6UWQ5 148 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 LINC00173Q6ZV60 143 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 LINC00469Q8N7U9 141 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 GATD1Q8NB37 220 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 PGLYRP4Q96LB8 373 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
CLIP4-212ENST00000493551 C19orf71A6NCJ1 209 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 MBP02144 154 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 Q5BKY6 102 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 CD164L2Q6UWJ8 174 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 UNQ6190/PRO20217Q6UXQ8 127 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 COX8CQ7Z4L0 72 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 Q8N377 158 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 ORAOV1Q8WV07 137 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 PSMG3Q9BT73 122 aaPredicted RBP2.45□□□□□ -2.02
CLIP4-212ENST00000493551 RNASE7Q9H1E1 156 aaKnown RBP2.45□□□□□ -2.02
CLIP4-212ENST00000493551 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
CLIP4-212ENST00000493551 ALG5Q9Y673 324 aa2.45□□□□□ -2.02
CLIP4-212ENST00000493551 FXYD6-FXYD2A0A087WZ82 144 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 RAB19A4D1S5 217 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 SDHAF1A6NFY7 115 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 GAGE10A6NGK3 116 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 ZNF861PO60384 105 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 PFDN1O60925 122 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 IFNA1P01562 189 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 CXCL1P09341 107 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 TRGC1P0CF51 173 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 IGLC6P0CF74 106 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 KRTAP13-2Q52LG2 175 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 CENPWQ5EE01 88 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 Q6ZUT4 128 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 LINC00304Q8N9R0 145 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 FAM213BQ8TBF2 198 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 MRAP2Q96G30 205 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 CCDC32Q9BV29 185 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 C6orf48Q9UBA6 75 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 TNFSF18Q9UNG2 199 aa2.44□□□□□ -2.02
CLIP4-212ENST00000493551 BORCS7-ASMTA0A0B4J1R7 106 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 RPL37AP8A6NKH3 93 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 SMKR1H3BMG3 65 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 NCR2O95944 276 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 ZNF25P17030 456 aaPredicted RBP2.43□□□□□ -2.02
CLIP4-212ENST00000493551 RPL35P42766 123 aaKnown RBP2.43□□□□□ -2.02
CLIP4-212ENST00000493551 SERF2P84101 59 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 TPRXLQ17RH7 258 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 C9orf129Q5T035 196 aaKnown RBP2.43□□□□□ -2.02
CLIP4-212ENST00000493551 C2orf82Q6UX34 121 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 TMUB2Q71RG4 321 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 LINC00337Q8N6G1 96 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 TSKUQ8WUA8 353 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 SFT2D1Q8WV19 159 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 SMDT1Q9H4I9 107 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 XAGE1AQ9HD64 81 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 CDC42SE2Q9NRR3 84 aa2.43□□□□□ -2.02
CLIP4-212ENST00000493551 CARHSP1Q9Y2V2 147 aaKnown RBP2.43□□□□□ -2.02
CLIP4-212ENST00000493551 C7orf77A4D0Y5 90 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 I3L3M4 83 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 NDUFA1O15239 70 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 RPS20P60866 119 aaKnown RBP2.42□□□□□ -2.02
CLIP4-212ENST00000493551 IFITM3Q01628 133 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 KCNRGQ8N5I3 272 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 C3orf22Q8N5N4 141 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 C2orf48Q96LS8 159 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 IMMP2LQ96T52 175 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 MARVELD1Q9BSK0 173 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 NKX6-2Q9C056 277 aaPredicted RBP2.42□□□□□ -2.02
CLIP4-212ENST00000493551 ST20Q9HBF5 79 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 GNG13Q9P2W3 67 aa2.42□□□□□ -2.02
CLIP4-212ENST00000493551 IGKV2D-26A0A0A0MRZ7 120 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 C1orf196B1AJZ1 125 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 G3V3Q6 166 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 SCO1O75880 301 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 GIPP09681 153 aaPredicted RBP2.41□□□□□ -2.02
CLIP4-212ENST00000493551 ESDP10768 282 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 FCER1GP30273 86 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 RPL28P46779 137 aaKnown RBP2.41□□□□□ -2.02
CLIP4-212ENST00000493551 UBE2AP49459 152 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 MT1HP80294 61 aa2.41□□□□□ -2.02
CLIP4-212ENST00000493551 MRPL35Q9NZE8 188 aaKnown RBP2.41□□□□□ -2.02
CLIP4-212ENST00000493551 TOMM7Q9P0U1 55 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms