RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 VCYO14598 125 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 IGLV7-43P04211 117 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 EIF5AP63241 154 aaKnown RBP4.2□□□□□ -1.74
CAB39-206ENST00000493540 C9orf116Q5BN46 136 aaPredicted RBP4.2□□□□□ -1.74
CAB39-206ENST00000493540 OCC1Q8TAD7 63 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 DPH3Q96FX2 82 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 MRAP2Q96G30 205 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 TIMM21Q9BVV7 248 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 TMEM242Q9NWH2 141 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 UBE2D4Q9Y2X8 147 aa4.2□□□□□ -1.74
CAB39-206ENST00000493540 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 C7orf77A4D0Y5 90 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 TMEM250H0YL14 139 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 TAGLN2P37802 199 aaKnown RBP4.19□□□□□ -1.74
CAB39-206ENST00000493540 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
CAB39-206ENST00000493540 RGS21Q2M5E4 152 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 PAPPA-AS1Q5QFB9 102 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 EIF5AL1Q6IS14 154 aaKnown RBP4.19□□□□□ -1.74
CAB39-206ENST00000493540 RNASEKQ6P5S7 137 aaKnown RBP4.19□□□□□ -1.74
CAB39-206ENST00000493540 OR10D4PQ8NGN7 298 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 ISOC2Q96AB3 205 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 TMEM191AQ9H0A3 160 aa4.19□□□□□ -1.74
CAB39-206ENST00000493540 MRPL35Q9NZE8 188 aaKnown RBP4.19□□□□□ -1.74
CAB39-206ENST00000493540 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
CAB39-206ENST00000493540 C1orf196B1AJZ1 125 aa4.18□□□□□ -1.74
CAB39-206ENST00000493540 F8WDY8 70 aa4.18□□□□□ -1.74
CAB39-206ENST00000493540 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
CAB39-206ENST00000493540 SS18Q15532 418 aa4.18□□□□□ -1.74
CAB39-206ENST00000493540 PHF5AQ7RTV0 110 aaKnown RBP4.18□□□□□ -1.74
CAB39-206ENST00000493540 MED9Q9NWA0 146 aa4.18□□□□□ -1.74
CAB39-206ENST00000493540 A8MWL6 223 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 COX7A2LO14548 114 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 RAB4AP20338 218 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 Q6ZUT4 128 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 DIRC1Q969H9 104 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 BTF3L4Q96K17 158 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 CAMK2N2Q96S95 79 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
CAB39-206ENST00000493540 TRBV24-1A0A075B6N3 115 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 FAM168BA1KXE4 195 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 TEX46H3BTG2 121 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 MT-ND6P03923 174 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 PMCHP20382 165 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 GAGE2BQ13066 116 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 C1orf137Q5JT78 98 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 TSKUQ8WUA8 353 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 SMDT1Q9H4I9 107 aa4.16□□□□□ -1.74
CAB39-206ENST00000493540 A0A1B0GUT8 65 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 HIGD1CA8MV81 97 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 MRPS36P82909 103 aaKnown RBP4.15□□□□□ -1.75
CAB39-206ENST00000493540 SPAG11BQ08648 103 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 SMIM15Q7Z3B0 74 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 LINC01551Q86U37 167 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 SLC51BQ86UW2 128 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 AMN1Q8IY45 258 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 TCTE3Q8IZS6 198 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 C6orf48Q9UBA6 75 aa4.15□□□□□ -1.75
CAB39-206ENST00000493540 CARHSP1Q9Y2V2 147 aaKnown RBP4.15□□□□□ -1.75
CAB39-206ENST00000493540 GATCO43716 136 aaKnown RBP4.14□□□□□ -1.75
CAB39-206ENST00000493540 RPL13AP40429 203 aaKnown RBP4.14□□□□□ -1.75
CAB39-206ENST00000493540 RPL18AQ02543 176 aaKnown RBP4.14□□□□□ -1.75
CAB39-206ENST00000493540 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
CAB39-206ENST00000493540 V9GYV3 84 aa4.14□□□□□ -1.75
CAB39-206ENST00000493540 A0A087WZ39 114 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 PPP1R2P9O14990 202 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 NDUFA1O15239 70 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 PPP1R17O96001 155 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 RNASE13Q5GAN3 156 aaKnown RBP4.13□□□□□ -1.75
CAB39-206ENST00000493540 C9orf129Q5T035 196 aaKnown RBP4.13□□□□□ -1.75
CAB39-206ENST00000493540 IMMP2LQ96T52 175 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 OPRPNQ99935 248 aaPredicted RBP4.13□□□□□ -1.75
CAB39-206ENST00000493540 C20orf78Q9BR46 151 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 SPANXA1Q9NS26 97 aa4.13□□□□□ -1.75
CAB39-206ENST00000493540 TRAV13-1A0A0B4J241 112 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 TRBV30A0A0K0K1B3 111 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 SMKR1H3BMG3 65 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 RPL39P62891 51 aaKnown RBP4.12□□□□□ -1.75
CAB39-206ENST00000493540 SMAGPQ0VAQ4 97 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 FAM104BQ5XKR9 115 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 C5orf38Q86SI9 138 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 ORAOV1Q8WV07 137 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 SMIM2Q9BVW6 85 aa4.12□□□□□ -1.75
CAB39-206ENST00000493540 A0A087X002 238 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 A0A0U1RQV1 116 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 A0A1B0GXF2 115 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 LINC00862A6NCI5 91 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 NDUFC2-KCTD14E9PQ53 114 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 M0QXV9 152 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 TCAPO15273 167 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 TMEM241Q24JQ0 296 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 MRPL51Q4U2R6 128 aaKnown RBP4.11□□□□□ -1.75
CAB39-206ENST00000493540 UNQ6190/PRO20217Q6UXQ8 127 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 FAM19A3Q7Z5A8 133 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 LINC01561Q8N1V8 128 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 KIR2DL4Q99706 377 aa4.11□□□□□ -1.75
CAB39-206ENST00000493540 SMIM27A0A1W2PRY6 76 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms