RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
GTF3C2-212ENST00000493511 C5orf38Q86SI9 138 aa11.49□□□□□ -0.57
GTF3C2-212ENST00000493511 TMEM141Q96I45 108 aa11.49□□□□□ -0.57
GTF3C2-212ENST00000493511 RPS10P5Q9NQ39 176 aa11.49□□□□□ -0.57
GTF3C2-212ENST00000493511 HERC1Q15751 4861 aa11.48□□□□□ -0.57
GTF3C2-212ENST00000493511 IGLV4-3A0A075B6K6 122 aa11.48□□□□□ -0.57
GTF3C2-212ENST00000493511 G0S2P27469 103 aa11.48□□□□□ -0.57
GTF3C2-212ENST00000493511 C2orf66Q6UXQ4 117 aa11.48□□□□□ -0.57
GTF3C2-212ENST00000493511 PRSS3P2Q8NHM4 247 aa11.48□□□□□ -0.57
GTF3C2-212ENST00000493511 A0A087WYN8 130 aa11.47□□□□□ -0.57
GTF3C2-212ENST00000493511 MT-ND6P03923 174 aa11.47□□□□□ -0.57
GTF3C2-212ENST00000493511 KIAA1644Q3SXP7 199 aa11.47□□□□□ -0.57
GTF3C2-212ENST00000493511 Q6ZN92 141 aa11.47□□□□□ -0.57
GTF3C2-212ENST00000493511 LINC00474Q9P2X8 69 aa11.47□□□□□ -0.57
GTF3C2-212ENST00000493511 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 TGIF2-C20orf24A0A0A6YYL0 155 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 IGKV2-24A0A0C4DH68 120 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 NPSP0C0P6 89 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 RPL37AP61513 92 aaKnown RBP11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 TEX43Q6ZNM6 134 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 OR10D4PQ8NGN7 298 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 C2orf88Q9BSF0 95 aa11.46□□□□□ -0.57
GTF3C2-212ENST00000493511 NDUFA5Q16718 116 aa11.45□□□□□ -0.58
GTF3C2-212ENST00000493511 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
GTF3C2-212ENST00000493511 CAMK2N2Q96S95 79 aa11.45□□□□□ -0.58
GTF3C2-212ENST00000493511 SPAG11BQ08648 103 aa11.44□□□□□ -0.58
GTF3C2-212ENST00000493511 VCX2Q9H322 139 aa11.44□□□□□ -0.58
GTF3C2-212ENST00000493511 PLAC8Q9NZF1 115 aa11.44□□□□□ -0.58
GTF3C2-212ENST00000493511 A0A096LNI7 61 aa11.43□□□□□ -0.58
GTF3C2-212ENST00000493511 APOC3P02656 99 aa11.43□□□□□ -0.58
GTF3C2-212ENST00000493511 KRTAP10-4P60372 401 aaPredicted RBP11.43□□□□□ -0.58
GTF3C2-212ENST00000493511 PAPPA-AS1Q5QFB9 102 aa11.43□□□□□ -0.58
GTF3C2-212ENST00000493511 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
GTF3C2-212ENST00000493511 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
GTF3C2-212ENST00000493511 Q6ZRU5 148 aa11.42□□□□□ -0.58
GTF3C2-212ENST00000493511 SVBPQ8N300 66 aa11.42□□□□□ -0.58
GTF3C2-212ENST00000493511 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
GTF3C2-212ENST00000493511 MRPL18Q9H0U6 180 aaKnown RBP11.42□□□□□ -0.58
GTF3C2-212ENST00000493511 A0A087WZ39 114 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 LOC107984640A0A0U1RRK4 108 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 IGIPA6NJ69 53 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 F8WDY8 70 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 SNAPINO95295 136 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 UBE2D1P51668 147 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 STPG4Q8N801 248 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 AMELXQ99217 191 aa11.41□□□□□ -0.58
GTF3C2-212ENST00000493511 C7orf33Q8WU49 177 aa11.4□□□□□ -0.58
GTF3C2-212ENST00000493511 TOMM6Q96B49 74 aa11.4□□□□□ -0.58
GTF3C2-212ENST00000493511 TIMM17AQ99595 171 aa11.4□□□□□ -0.58
GTF3C2-212ENST00000493511 LINC01549A6NIU2 74 aa11.39□□□□□ -0.59
GTF3C2-212ENST00000493511 LINC00173Q6ZV60 143 aa11.39□□□□□ -0.59
GTF3C2-212ENST00000493511 PTTG1IPP53801 180 aa11.38□□□□□ -0.59
GTF3C2-212ENST00000493511 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
GTF3C2-212ENST00000493511 LINC01546A6NGU7 62 aa11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 NDUFA1O15239 70 aa11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 SEC11AP67812 179 aa11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 ERASQ7Z444 233 aa11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 SMCO4Q9NRQ5 59 aa11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
GTF3C2-212ENST00000493511 PKHD1L1Q86WI1 4243 aa11.36□□□□□ -0.59
GTF3C2-212ENST00000493511 LRP1Q07954 4544 aaKnown RBP11.36□□□□□ -0.59
GTF3C2-212ENST00000493511 GAGE2BQ13066 116 aa11.36□□□□□ -0.59
GTF3C2-212ENST00000493511 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
GTF3C2-212ENST00000493511 FA2HQ7L5A8 372 aa11.36□□□□□ -0.59
GTF3C2-212ENST00000493511 LINC01561Q8N1V8 128 aa11.36□□□□□ -0.59
GTF3C2-212ENST00000493511 FAM19A3Q7Z5A8 133 aa11.35□□□□□ -0.59
GTF3C2-212ENST00000493511 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
GTF3C2-212ENST00000493511 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.34□□□□□ -0.59
GTF3C2-212ENST00000493511 J3QL48 77 aa11.34□□□□□ -0.59
GTF3C2-212ENST00000493511 HERVK_113P63121 156 aa11.34□□□□□ -0.59
GTF3C2-212ENST00000493511 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
GTF3C2-212ENST00000493511 KRTAP29-1A8MX34 341 aaPredicted RBP11.33□□□□□ -0.6
GTF3C2-212ENST00000493511 GEMIN7Q9H840 131 aaKnown RBP11.33□□□□□ -0.6
GTF3C2-212ENST00000493511 FAT3Q8TDW7 4589 aa11.33□□□□□ -0.6
GTF3C2-212ENST00000493511 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
GTF3C2-212ENST00000493511 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
GTF3C2-212ENST00000493511 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
GTF3C2-212ENST00000493511 PRSS2P07478 247 aa11.3□□□□□ -0.6
GTF3C2-212ENST00000493511 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
GTF3C2-212ENST00000493511 PACRGQ96M98 296 aaPredicted RBP11.3□□□□□ -0.6
GTF3C2-212ENST00000493511 TRBV30A0A0K0K1B3 111 aa11.29□□□□□ -0.6
GTF3C2-212ENST00000493511 OXTP01178 125 aa11.29□□□□□ -0.6
GTF3C2-212ENST00000493511 HNRNPA3P51991 378 aaKnown RBP11.29□□□□□ -0.6
GTF3C2-212ENST00000493511 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
GTF3C2-212ENST00000493511 C6orf48Q9UBA6 75 aa11.29□□□□□ -0.6
GTF3C2-212ENST00000493511 TLX1NBP0CAT3 122 aa11.28□□□□□ -0.6
GTF3C2-212ENST00000493511 TOMM7Q9P0U1 55 aa11.28□□□□□ -0.6
GTF3C2-212ENST00000493511 CDKN2A-AS1Q9UH64 79 aa11.28□□□□□ -0.6
GTF3C2-212ENST00000493511 LINC00614P0C842 121 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 RAB5BP61020 215 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 CKS1BP61024 79 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 C6orf226Q5I0X4 101 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 C2orf82Q6UX34 121 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 Q8IZM0 81 aa11.27□□□□□ -0.61
GTF3C2-212ENST00000493511 LINC00469Q8N7U9 141 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms